Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name Atmin
Plot displaying the genomic locations of a parental gene (in chr19) and its retrocopy(ies). Each line represents a retrocopy.
Specie Rattus norvegicus
Full Name ATM interactor
Also known as Asciz|RGD1305781
Coordinate chr19:49482482-49499682
Strand +
Gene summary Predicted to enable DNA-binding transcription activator activity, RNA polymerase II-specific; dynein complex binding activity; and transcription cis-regulatory region binding activity. Predicted to be involved in positive regulation of transcription by RNA polymerase II. Predicted to act upstream of or within motile cilium assembly; positive regulation of gene expression; and positive regulation of non-motile cilium assembly. Predicted to be located in nuclear body. Orthologous to human ATMIN (ATM interactor). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Atmin

Retroname Coord Strand Genomic Region ENSG
AtminP1 chr1:173186511-173191296 - Intergenic
N/A UCSC
AtminP2 chr7:74323698-74328603 - Intergenic
N/A UCSC

Expression

Transcript Sequences

>NM_001191786.1
ATGGCGGCCACGGAGGCGGCGGCGGCTGAGTCTGCGGGTCCGGCCCCGGGTGTCCCGGTCACGCCGGCGAGCACGCGGGGAGCCGCCGCCGCCTCAAGCCCGTGGAGGCCGTCGGAGTCGCGACTGCAAGGCAGTCGACCGCGACTggccagggctcgggccgcggccccggtgccaccggcccgggAGCTGATCCAGCCGTCTGTGAGCGAGCTGTCCCGGGCTGTGCGCACCAATATTCTGTGCACTGTGCGCGGCTGCGGCAAGATCCTGCCCAACAGTCCTGCGCTCAACATGCACCTAGTCAAGAGCCACCGACTGCAGGATGGCATAGTAAATCCAACAATAAGAAAAGATTTGAAAACTGTACCGAAATTCTACTGTTGTCCAATCAAAGGATGCCCTCGAGGCCCTGACAGACCATTTTCTCAGTTTTCTCTGGTTAAACAGCACTTTATGAAAATGCATGCGGAGAAGAAGCACAAGTGCAGTAAGTGCAGTAACTCCTATGGCACCGAGTGGGACCTGAGAAGACACGAGGAAGATTGTGGCAAGACCTTCCAGTGTACGTGTGGCTGTCCCTATGCCAGCAGAACCGCACTGCAGTCTCACATCTACCGGACTGGCCACGAGATCCCTGCAGAACACAGAGACCCACCTAGTAAAAAAAGGAAGATAGAAAGCCAAACGCTGTCCACTAAAACCATTGGACCACTGGGTGACCAACCAGCCCCTCGCCAAGATGCCCATGAGCCACGTGCTTCGGAAGTGAAGCTAGCAGCCTCCCTTGAAGACTCTTGTAGCTCCCACACCAAAAAGCAGAGCTTCCCAACGCCTCCTAGGTGCCCCCAGAAGCTGCTTCTACCAAAGCCCAAGGTGGCTCTGGTTAAACTCCCAGTCATGCAGTTTTCCCCTGTGCCTGTCTTTGTGCCTACAGCGGACTCCTCGGCCCAGCCCGTGGTGTTAGGTGTGGATCACAGTTCTGCAGCGGGTGCTGTGCACTTAGTACCCTCAGTAGGAACCTTGATCCTCAGCCTGGATTCAGAGGCCTGCTCTCTGAAGGAGAGCCTACCTCTCTCAAAAATTATCAGTCCTGTTGTCGAGCCAATGAATACAGGTGTTCAGGTGAACTTGGGCAAAAGTCTGTGTCGTCCTTTGCAAGAGGGCGGGAGTGTGTGTCAGAAGAACAGCATTTCCTCAGCCAACGTGCAGACAGATCTGTCATATGCCTCAGCCAACTTGATACCCTCTGCTCAGTGGCTTGGCCCCGACTCCTCTGTGTCATCGTGTTCTCAGACTGACCTGTCCTTTGATTCTCAAGTGTCCCTTCCTGTTAGTGTCCACACCCAGACGTTGGTGCCCAGCTCTAAGGTCACTTCATCCATAGCTGCCCAGACAGATGCGTTTCTAGACGCCTGTTTCCAGCCCAGTGGGGTCTCCAGAGAAACCCAAACCTGTAGGATACAAAACCGCACAGATGACCCAGTGCCGGTAGGCCACCCTGGGCTGTGTGGGGACATTTTTGAAGGCGTCCATTCGTCATATGGTGTGCCCAGCGACAACATCATGAGTAGCAGTTTAGTTGCAGAGACAGTAACTCACAGTCTGGTACCTCAGAGTGACCCCAAGATCCTAAGCCAAGTCATGGAAAAGTCTGCGCCCGTGTTAAACTTCAGTGCCCAGAACAGCATGCTTCCTTCACAAAACATGACCGATAACCAGACCCAAACCATAGATCTACTGAGTGACCTAGAAAACATCTTGTCCAGTAATCTGCCAGGCCAAACGCTGGATAACCGGAGTCTCTTGTCTGACACAAACCCCGGGCCTGACGCCCAGCTCCCATCAGGTTCAGCGCAGAACTCCGGGATTGATTTTGATATTGAAGAGTTCCTCTCAGCCTCAAATATCCAGACTCAGACTGAGGAGAGTGAACTCAGCTCCATGAGCACTGAGCCCGTCTTGGAGTCCCTGGACATCGAGACACAGACTGACCTCTTCCTGTCCGATCCCTGCACACAGCCCTATGGGCTCAGGGCAGGTTCGGGTTTCCTGGGCCTCGAGATGTTTGACACACAGACCCAGACAGACTTGAACTTCTTCCTGGACAGCAGTCCTCACCTGCCCCTGGGCAGCATCCTGAGACACTCTAGCTTCTCCATGAGCACCGACTCCTCTGACACAGAAACCCAAACGGAAGGGGCCTCCCCAGCTCGACATGCACCCACGCTGGAGAGCAAGGTCCAGCTGAGCAGCACAGAAACACAGACCATGAGTTCTGGCTTCGAGCCCCTGGGGAACTTGTTCCTCACCAGCAACGAGACTCAGACAGCAATGGATGACTTCCTTCTAGCTGATTTGGCCTGGAATACGATGGAGTCCCAGTTCAGTTCTGTGGAAACCCAGACATGCGCAGAGCTGCATGCTGTCTCCAGCTTCTGAAAGTGCAACCAGGCACCCCACTCCTTGTGGGCTTAGAACATGGGGACAGGGACAGCGGCATGGACTGGGGTGCAGTCAGTGGGGCAGCTGTTTGGGTTCTCTGCAGTTCTTGGTGTTTTGTACTCGTGAACACAAGATTGGTGTGCAAATGTGAGTGTATTATAAAGTGTAAAGTGTTGCTCTTAAGTGTCGCCTGCGTCTGCTCCTGTGTAGCCATTCTATTTTACACTGTAAAACTTAGACCTGTCTAGTTAAAGCCTAGCTTACCAGGCAGTAGGGTGCAAGCTTTGCAACTGCTTTAACTGAGGAACGGCACACTTAAATGGCACCTCAAACGCTCAGACAACGCTTGTGTGGCTGCTGACTCCTGAGATGCCACCACCTTGCCTTGTCACGTCCCTCTGACTTGGAAGCACCAGGGGAAGCCATAGCTGTCTTTAGCTTTTATGACAGTTTTTAGTCTCTGCTGTCTCTTCTCTCCCAAGCTGTGACTGCTGGCAGCTTTGTGTGCCATCCTTCTCTCTGTGAGGTGACCGGCCATTGTGGGAACAGCGAGCACTTAGTGTAAATAACAGTTTAGTAAGAGGAAGGCATCCAGCCTGTGGAGATGTGCACTGTGGAAACCCATCGTCTTTTTTTTTGTTGTTGTTTTTTATCTTGGGCTGATCCTGCTTCATGGAAAAGCTTTTCTCTTCTCTCTTGATAGTGTTGATCAAAAAGATCTCTGTGACCAAATCTGTGGGATTGCCACGTGACAGACAGTAGCCAGCTGTAATTACAcaggggctagatggtagttactggttgaccccagagcttctagctctctataaattggggttcctgtgactccccactctttgtgctcggttgatttgctagaacTCAGGGATACCGTTTCTGTGAagggttagactgggtagaaagggggcagagtacgtccatggcttctctaggcacaacaccaaccacgtctgtgtggttccttgcagaaaccttccaaacccagtcttgcagggttaatggctccttcgttgtgtgggtagagagttaacttaaaccattagtgatcaacttaaccttgagtgttacccttcccagttgcgttggggggtagggatgaagctgtaaatatcccaacctttcagtcattagttatgccttggtctcccctgtgacttgtccccatcctaatattacccggaagctagcagctaccaatgacctcatagcaagcaaaagCAAAATATGTTTCCGAATGCTTCGGGTTTGGGGGAAGTTATGTGCAAATACACACTTTACATCACCACCCCACAAACATCCTTCCTGCTCCACAGGAGACCGTGGGCCTACCCGACTGTAATGTACTCAGAGACCCTCTAAGGATTAAAAAGGAAAATGTGGGATGAGGAAAAGACATTTCTGCCCAGCCCCCTGTCAGTATGCTGCACTTCGAACCTTGATAGGAGGAGCAGGGCCCTCAGAGTCTTTCCTTCCATCCACCCCCATCTTTTCCTTCGCTCAGGCAAACAGATGATGTGTACCTTGAGACTAGCAACTGTAGAATAGATCCATCAGTAGTATGCTAACCTAGAGCCTGTTAGGATACATTCTTTAAAGAGGAAAAAGTCTGGAGACTAACTGCTCCAATAGATAAAACACTCTCATTCTGAGTGGAGAGTGAGGTCTAGCATGCCTTGGGGGGCTCTCTGTGCTAAGTAGATCATGGATTCATAGCTGTTGCCCAACTCAGAGGCAAATCAGAATGAGCACAGCCTGGGGACCCTTTCAGTCTAGCTTGGAAATCCCTGTTCTTTCTGTAGCATAGGTTTGTGCTGCCACAAGCTGAACCTTCAAAATAAAACCTAAGGGGGCTGGTGATGACTCATTAAATAAATTGGTATTGCTGCCGTCCTGTCCCATTCACCCGATGCAAAGGACTTGGTAATGGGCTAATAACACACCCGGCAGAGGAGTGCAACCCAGGAGCTAAACCGTGGTTTTGGTCACAGTCGTCTGTGAATGTGAGTTTCAGAAGAGACATAAAGCCTTAACTTAGATTTTCTGTTGTGTTGGAATTGTCGCTGCCTTAACGCTCAAGCCCTGTTTAAGCCCTCCGGCCCCGGGAGAGCTGCATGTGTGCTCGTGGTTCTTTGTAAATAGAAGTGCAGTGATCTATGGCTTTAAGTTTTTGTGTCTGTGGCAATGTGTCTTTATATATAGTTACAGGAAAAAGAATGGAGCATGTAATTGTCCTTCATGTGCAAGAACTGTTCCCACCAAACCTTAGTTACCTGAACTCCCCTAAGGTTGTAAACATAAATTCAGTGATTAAAGAGAATTCTACACCTTTC