Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Advanced Search

Summary

Gene Name Atg4b
Plot displaying the genomic locations of a parental gene (in chr9) and its retrocopy(ies). Each line represents a retrocopy.
Specie Rattus norvegicus
Full Name autophagy related 4B, cysteine peptidase
Also known as Apg4b
Coordinate chr9:100888457-100920123
Strand +
Gene summary Predicted to enable cysteine-type peptidase activity; endopeptidase activity; and scaffold protein binding activity. Involved in positive regulation of protein catabolic process. Predicted to be located in cytoplasm. Orthologous to human ATG4B (autophagy related 4B cysteine peptidase). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Atg4b

Retroname Coord Strand Genomic Region ENSG
Atg4bP1 chr1:17268510-17269740 - Intragenic
 N/A UCSC

Expression

Transcript Sequences

>XM_006245534.3
GCGAGATGGCGACGCCCGCGCTTCCGCTGCGCCGCGCTTGGCTACCTCGGCTTCCCGTCGCTGTGTCGCGCAGTAGCCCGTCGGAGCGACAGCACGGTCAGTCGGCGGCCGGACAGGGAAGATGGACGCAGCCACTTTGACATATGATACTCTCCGGTTTGCCGAATTTGAAGATTTCCCCGAGACCTCAGAGCCTGTTTGGATTCTGGGCAGAAAATACAGCATTTTCACAGAGAAGGATGAGATCTTGTCTGATGTTGCATCCAGACTTTGGTTTACGTACAGGAGAAACTTTCCAGCTATTGATTGGAGATGGACTCAGCGGAAGAGACAGCCTGACAGCTACTTCAGTGTCCTCAACGCTTTCCTCGACAGGAAGGACAGCTACTATTCCATCCACCAGATAGCGCAAATGGGAGTTGGCGAAGGCAAGTCTATAGGCCAGTGGTACGGGCCGAACACTGTTGCCCAGGTCCTCAAGAAACTGGCTGTATTCGACACATGGAGCTCCCTGGCTGTTCACATAGCAATGGACAACACTGTGGTGATGGAGGAAATCAGAAGATTGTGCAGGGCCAGCCTTCCCTGTGCCGGGGCCGCTGCACTATCCATGGAGTCAGAGAGGCACTGTAACGGGCTCCCTGCTGGAGCTGAAGTCACCAACAGGCCCTTGGCCTGGAGACCATTAGTGCTTCTCATCCCTCTTCGCCTGGGACTGACAGACATCAATGAGGCCTATGTGGAGACGCTGAAGCACTGTTTCATGATGCCCCAGTCCCTGGGTGTTATTGGAGGGAAGCCCAACAGTGCCCACTACTTTATTGGCTACGTTGGTGAGGAGCTCATCTATCTGGATCCCCATACTACACAGCCTGCAGTGGAGCTGACAGACAGCTGCTTTATCCCCGACGAGAGCTTCCACTGCCAACACCCTCCCTGTCGGATGGGCATTGGGGAGCTTGACCCATCCATTGCCGTGGGGTTTTTCTGTAAGACCGAGGAAGACTTTAATGACTGGTGCCAGCAAGTCAAAAAGCTGTCCCAGCTTGGAGGTGCCCTGCCCATGTTTGAGTTGGTGGAACAGCAGCCTTCCCATCTGGCCTGCCAGGATGTCCTGAACCTGTCCCTAGATTCTTCTGATGTAGAGAGACTGGAGAGGTTCTTTGACTCTGAGGATGAAGACTTTGAAATCTTATCCCTCTGAAAATCCTGGGGTTGGGGGATGGCCTCCATGGCCCTCATTGGGGTGCGTTGAGAACCCAGACCTGCCTTGGGCACTCAGTGTCACCGCATTCCATCCACCCAGCCCACCCTGCTGAGTGCTGTCCGCCTGTGCCACCTCTGTCCCGAGGGCCTGCTCTGCTCATGGACCAAGGACTGTGGTGCCTGGAGGCCTTACTGCTTGGAGTCAGACTGCCTAAGCCCAAACACACAAGGGCCTGTCCACATGAAGGCGCTCACCAGAAGGCCTAGTCAGGAAGAGCAGTGGGTCGGGAGCGCCCAGCATTCTCCACTCGACACTGCCAGCCCTGGTCAGCGCATCAGCTTGGTTCTGCTTTCTCCTGGGCACCTGGGTCTGTGGTTTATTTGGAATTAAAGCCCTGTTTGAAGTTGTTTAACAAAGACATGAATTTCTGGGGCACTTCCCAGGTCAGTCTTAGAAGATCTGCAGGTTGGCGTGTACAGAGTGACAGCCACATCATGGCCTCATAACTGCTGGGCAGGGTGAGCTTTTGTGCTGTCTCCTCTGCCCAGTGTGATTATCAAGGGCTACCTCAGTGGGAAAGCATATGGAGAGAATCCCAGCAAGGCTGCTATTTGCTTTGGAGAAAAAGTATTCTTGTGGGGCATTTGGAAAATCCAAAGATACCAGTGTGCATGGGCACAATATGGACACCTGAACCTTGGAGCAGCTGACAAGTTTCTAGTGCTTCTGGAGTTGTGGTCTTGAGGTTCTCCATTAGGCCCTCACTAGGGAAGAGCTATGTCTCCTATATGGGGTTGATGGGTTTCATGACACGCTGCCTGCTGCTGTTAGCTTGCCACCCAGCTTCCCTCTGGGAGGAAAGGGAGGGGGGGAGCAGAGCTGTTCTTTGCTTGTGACACTGTGCCCACTGGTAGTAGGGCACACACTGCTATTTGAGCCTTCCTCCATGTTCTTTCCCTTCTCAGAAACCCTCCTGGGACATAGGAAATTTTAGATGGTTTGGGGCCAACAAGGTAAAAGTACTGCAGCTTTCGGTGCAGAGTAGACATTTAGACAGAGCAGGTAGCTCCAGGCACCAGTGGGTGAAGAGTTCAGCTCTCCTTGGCACTCATTTCCATACCTGCCACCTAACCTTGGCTTCCTGGGCCTTCAAGCTTTGGGTGCTCTAGGTCTGCTGTCTTAGAAAAGCACCTTTCCTCCCCCTAGATAGGAAACAGGGTATGGCATTGTGGGGAGGCCCATGCAACAAACAGCCTTTGCTAAAAATCCTCCCCAAGAGCCTGTAGATGGGTGAGGCTGGAGCTACTCCAGATACAGCAGCTCTAAGTAGCCCACGAGGTAGCAAGAGATCCTGCCTATCAACATCAGATATGTTGATGACATATTTATTTCATCTTATTCCTCTCTCCCGTATCTTGTCCCTTGACTTCAGATGGGGTGGGACAGGAAGACTAGGGCAATTCCCATTCCTCTGGAGCTTGCTTCCTGGTCCAGGAGCCATTGTGCTGTTGTCGACTAGGGTCTTGTTGTAACTCCTGCTGTTGGTAGCAAGGGTGGATGTCTGGAACCCGACAACCTGAAGGACCTCTCAGGGCTCAAGAAAGGCCTCCTGAGGTTGTTCATTCTTCGTAGTGTAGTTTGCAATCCTTAACAGTAAATAATAAGTTTCAGTAGAAAACAG