Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

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Summary

Gene Name Rpl7l1
Plot displaying the genomic locations of a parental gene (in chr9) and its retrocopy(ies). Each line represents a retrocopy.
Specie Rattus norvegicus
Full Name ribosomal protein L7-like 1
Also known as RGD1308469
Coordinate chr9:16508477-16516502
Strand +
Gene summary Predicted to enable RNA binding activity. Predicted to be a structural constituent of ribosome. Predicted to be involved in maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA). Predicted to act upstream of or within blastocyst formation. Predicted to be located in nucleolus. Predicted to be part of cytosolic large ribosomal subunit. Orthologous to human RPL7L1 (ribosomal protein L7 like 1). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Rpl7l1

Retroname Coord Strand Genomic Region ENSG
Rpl7l1P1 chr13:62661174-62661768 + Intergenic
 N/A UCSC
Rpl7l1P2 chr13:78619559-78620790 + Intergenic
 N/A UCSC
Rpl7l1P3 chrX:44157705-44159551 + Intergenic
 N/A UCSC

Expression

Transcript Sequences

>XM_228615.8
ATGCATTGTGGGAAGCCTTTAACTCGTTGACAGGCGGCCGTGTTCGAGGCGCTACATTCCTAACCGAAAAAGGCTGGATCTAGACGGGTGTCAGACTCTAGAAAACCTAGAAGGAATGTGACGGAAACTCCTCCAGTTTTTGCTGGAATCAGGGCTAGCAAGACCATTTCTCAGAACCTCACAGCCGCTAAGGAATCTCAGGCCGCCTGAGTCCTCCAGCGTGAGCGAGAGTCCCGTCTCTATGATCAAGGAGACATAGAGGCGGGCCTCTCTACCCTGCCTGGTGAGACTGCGCATGAGCAGTAGCTGGAGCACTGGGAAGATGGCGGAGGAAGGGGAAAGAAAAAAGATCCCTTTGGTTCCAGAAAATCTCCTGAAAAAGAGGAAGGCTTATCAAGCGCTCAAAGCCACTCAGGCAAAGCAGGCTCTTTTGGCAAAGAGAGAGAGAAAAGGGAAAGAATTCCGGTTTAGACGACTAGAATCTTTCGTGCATGATTCCTGGCGGCAGCAACGAGACAAGGTGCGTGTCCGGCGACTAGAAGTGAAGCCGCGCGCTTTGGAGGTCCCTGATAAACACTCCTTGGCCTTCGTTATACGCATGGAAAGGATTCAAGGAGTGAGTTTATTGGTAAAGAGCACCATCATGAAACTTGGCCTGAAGAAGTTGTTCAGTGGCGTCTTTGTCAAGGTCACCCCTCAGAGTATGAGAATGCTGCGCACAGTGGAGCCTTATGTGACCTGGGGATTTCCAAATCTGAAGTCTGTCCGAGAACTCATCTTGAAGCGTGGACAAGCAAAGATTAACAATAAGACTGTCCCTCTGACCGACAACACAGTGATTGAGGAGCACTTGGGGCAGTTTGGTGTCATTTGCCTGGAAGACCTCATCCATGAAATTGCCTTCCCTGGGAAGCATTTCCAGCAGATCTCTTCATTCTTGTGCCCTTTCCACCTCTCTGTGGCCCGTCATGCTACCAAGAATAGAGTGGGCTTCCTCAAGGAGATGGGCTCGCCTGGCTACCGGGGTGACCGCATCAACCAGCTCATCCGGCAGCTCAACTAGAGCAGGAGCAGGTTTTCCAAAAGCATGAATTGGAAATGCTTTTGTTTGTATAAAATTACCAAGTATCTTCAGAGAAGATTATTTTCTGCCTTCAAAAACTGAAGGAAAGGGCCAGGAGAACCACAGTAGGGTGTGCGAGCATCGAAGACATTTAGCAGGGACCAGTTCATGGAACAGGGCGATTGTTCTCCAGTTGGCTGCCCGTCTCTGAGATCCGCACAAGCTGTGGAGGAAAGAACTGCCCTGCCTTCCTTCCATCTCGGTGTTTAATGTTGGGTGAGCGACTAGCCCAAGTATCCCTCCCACGCCCTCCAAGACTCTTAAAGCAGTGGGGCAGACCAAGGGGCACACTTGAATCTGGATGAAGAGGGTCTTGGTTTTACTTTTTATTTTTGTCAGAGATGGttggtttgttcaatacaacgtcttcctgtgtggccctggctagccttaaactccacagcagccctgcctccgccccGCCCTGAAACCCACGCCCACCCCCAGCTGTTGGTGTATAAGCCTGGGGGCTTGTTCCTCAGGCAGAAAGGCAACAATGGTGGTGCTCAGTCTTATGTGAGGCCATGTTACAACCGCTTTGGGACCTCTGGGGCTTGCTGCCCTTGATCAGTGTAACAGCATTTGTACCCTGACCTGCAGTGACAGTCCTTTCCTGTAGCTCAGGATTTAGAAAAACACAAGCATAAATCCATACACTGTGCTTGGAACTCCACAACGGTGACACACACCCTCTTGGCACACGGAAGTCTTTTGTGAGGACAGCCTGTTTTTCTATGCACATTGGTCTGTGAAGTTAGTCTTGTTCTGTGCTACAGGAGGGGACTGAAGTTCAACCACTTGTTTTCAACTACGAAATAGTGTTTagctgggcctgatggcacacacctttagtcacaacacttgagaggcagaggcaggcagatctcctgagttcaaggccaggcaagcctgttctacagagttccaggatacccagggctacacacagagaaaatattaaagaccaacaaaaACCAATGATATGAAAGACTATTGTTTTTAAACTTCCCATACCCAGGAAACGCCCCCTAAACTTCGCCCTTGGCTTAAGGATTCCCGTCTTGCCTTTCCTTAAAACCCACATGAGTCCACATTCCTAACACATGCTTCCCTTGGGCTTGCCTATAACCCTGACTTCATGGGGCCTTGGGATATCAGTGGTAACTGTTGTAGGGCATTGGGAAATGAGGTGACCAAAAATGCATTGCAGTCTTGGAGAAATGAGTCCTGGATCTTACTAAGTTGGGGAGCACTGCAGTGTTGGTGGTGCTTGTCTGCTGTGTAAGAGCCCCTGGATGAGCTGAGCCAAGTCTTCCATTTCTAGTTGCTCAGAGTTTAAAGCAAGGGTTTTTTCTATATAGTAAAAGATGATTTTTAAAAttta