Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

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Summary

Gene Name Apex2
Plot displaying the genomic locations of a parental gene (in chrX) and its retrocopy(ies). Each line represents a retrocopy.
Specie Rattus norvegicus
Full Name apurinic/apyrimidinic endodeoxyribonuclease 2
Also known as -
Coordinate chrX:23146085-23166676
Strand +
Gene summary Predicted to enable DNA-(apurinic or apyrimidinic site) endonuclease activity; double-stranded DNA 3'-5' exodeoxyribonuclease activity; and phosphoric diester hydrolase activity. Predicted to be involved in base-excision repair. Predicted to be located in fibrillar center; mitochondrial inner membrane; and nucleoplasm. Predicted to be active in nucleus. Orthologous to human APEX2 (apurinic/apyrimidinic endodeoxyribonuclease 2). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Apex2

Retroname Coord Strand Genomic Region ENSG
Apex2P1 chr8:113981208-113982951 + Intragenic
 N/A UCSC
Apex2P2 chr14:71709739-71710789 - Intergenic
 N/A UCSC

Expression

Transcript Sequences

>NM_001079892.1
GTATAGTTTACTAAAATGCTGCGTGTGGTAAGCTGGAACATCAATGGGATCCGGAGTCCCCTGCAAGGGCTTGCGGGCCAGGAACCGAGCAACAGTCCCACGGCCTTGCGACGCGTTTTGGACGAGCTGGATGCTGATATTGTCTGTCTCCAGGAGACCAAAGTAACCAGAGATGTACTGACAGAGCCTCTGGCTATTGTTGAGGGTTATAACTCCTATTTCAGCTTCAGCCGCAGCCGTAGTGGCTATTCTGGTGTGGCTACCTTTTGTAAGGACAGTGCTACCCCAGTAGCTGCTGAAGAAGGTCTGAGTGGTGTGTTTGCTACCCTAAATGGGGATATTGGTTGCTATGGAAACACGGACGAGTTCACGCAAGAAGAACTCCGGGTTCTGGATAGTGAGGGCCGGGCCTTCCTTACACAGCACAAGATCCGCACATTGGAAGGGAAGGAGAAGACCTTGACTCTGATCAATGTGTACTGCCCTCACGCGGATCCTGGGAAGCCTGAGCGGCTGACCTTTAAGATGCGCTTCTATCGCCTGCTGCAGATCCGAGCAGAAGCACTCCTGGCAGCTGGCAGTCATGTGATAATCCTGGGGGACCTGAATACAGCCCACCGACCCATTGACCACTGTGATGCAAGTAGTCTGGAATGCTTTGAAGAGGACCCAGGGCGTAAGTGGATGGATGGCTTGCTCAGTAACCCAGGGAATGAGGCTGGACCCCACATAGGGCACTTCATGGATAGTTTCCGCTACTTCCATCCAAAACAGCAGAGGGCTTTCACCTGCTGGTCAGTGGTCAGTGGGGCACGCCATCTCAACTATGGCTCTCGACTTGATTATGTCCTGGGAGATAGGAGCTTGGTCATAGATACCTTCCAGGCCTCCTTTCTACTCCCTGAAGTGATGGGCTCTGACCACTGCCCCGTGGGAGCTGTCTTAAATGTATCCTGTGTGCCAGCAAAACAGTGCCCAGCTCTGTGTACCCGCTTCCTCCCTGAGTTTGCAGGTACCCAGCTCAAGATTCTTCGCTTCCTAGTTCCTCTTGAACAAGAACCTGTGAAGGAACAGCCAGTCCTGCAGCCTCATCAAATCCAGGCACAGAAACAGCCAAGCAAAGCCCGCATACATTCAACCAGGCTTCGGAAAACTCAAGGTGTCCCCAAAAGAAACCAGAAAAGCCTGATGAGTTACTTCCAGCCTTCCTCTAACCTTTCCCAAACTTCTGATGTAGAACTGCCTACCCTGCCTCTGGTGAGCCCTCTTACAAGCACAAAGACTGCAGAAGAGGTGGCAATGGCCACAGTGGTAAAAGAGAAGAACAAGGTTCCAGAGGCCAAAGATGAGAAGGAAGTAAGGACTGCCTTCTGGAAGTCTATGCTGAGTGGGCCCTCACCAATGCCCCTCTGTGGAGGCCACAGGGAGCCATGTGTAATGCGTACTGTAAAAAAAGCAGGACCCAACTTTGGCCGCCATTTCTATATGTGTGCTAGACCCCGAGGTCCTCCCAGTGACCCCTCCTCCCGCTGTAACTTCTTCCTCTGGAGTAGGCCCAGCTGAACAGACCGAGGCATAGGGATATCTGCGTATTCACCCCATACACAGGGTCGATACCAGGTCCCTGCCTTTGAAGATGTCTTCCCACCGAGActtcttttcctttgctttctcttctcttggttcactcccttccttcccttcTTCCCCTAATGCCTCTCCCATTCTCATATCTCTGTTTCTTCCTCTTTGTAACTTGTAGGAGCAAGGTACTAAGTTAACCCCTTCTGCTCTTGCTGGGGTATAAATAACATTTTGTTCATAAATAAAGTTCATATTTTTGTTTCAGTA