Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

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Summary

Gene Name Rpl13a
Plot displaying the genomic locations of a parental gene (in chr1) and its retrocopy(ies). Each line represents a retrocopy.
Specie Rattus norvegicus
Full Name ribosomal protein L13A
Also known as -
Coordinate chr1:101120325-101123401
Strand -
Gene summary Predicted to enable mRNA binding activity. Predicted to be a structural constituent of ribosome. Involved in cellular response to UV-B; cellular response to cAMP; and cellular response to gamma radiation. Located in ribosome. Part of cytosolic large ribosomal subunit. Orthologous to human RPL13A (ribosomal protein L13a). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Rpl13a

Retroname Coord Strand Genomic Region ENSG
Rpl13aP2 chr1:8201926-8202506 - Intragenic
 N/A UCSC
Rpl13aP3 chr1:94737321-94737913 - Intergenic
 N/A UCSC
Rpl13aP4 chr10:3567099-3567686 + Intergenic
 N/A UCSC
Rpl13aP5 chr11:57173333-57173797 - Intragenic
 N/A UCSC
Rpl13aP6 chr14:1004173-1004825 + Intergenic
 N/A UCSC
Rpl13aP8 chr16:68926830-68927477 + Intergenic
 N/A UCSC
Rpl13aP9 chr16:8709288-8709926 - Intergenic
 N/A UCSC
Rpl13aP12 chr20:43142633-43143286 + Intergenic
 N/A UCSC
Rpl13aP1 chr1:43174706-43175712 + Intergenic
 N/A UCSC
Rpl13aP7 chr14:86362095-86363059 - Intragenic
 N/A UCSC
Rpl13aP10 chr17:24610083-24611090 - Intergenic
 N/A UCSC
Rpl13aP11 chr18:61222188-61223196 + Intergenic
 N/A UCSC

Expression

Transcript Sequences

>NM_173340.2
GGCGGCTGCCGAAGATGGCGGAGGGGCAGGTTCTAGTATTGGATGGCCGGGGCCATCTTCTGGGCCGCCTGGCGGCCATTGTGGCCAAGCAGGTACTGCTGGGCCGAAAGGTGGTGGTTGTACGCTGTGAGGGCATCAACATTTCTGGAAATTTCTACAGAAACAAGTTAAAGTATCTGGCCTTTCTCCGAAAGCGGATGAACACCAACCCGTCTCGAGGCCCCTACCACTTCCGAGCCCCAAGCCGCATTTTTTGGCGCACTGTGCGAGGCATGCTGCCGCACAAGACCAAAAGAGGCCAGGCTGCCCTGGAACGCCTCAAGGTGTTGGATGGGATCCCTCCACCCTATGACAAGAAAAAGCGGATGGTGGTCCCTGCTGCCCTCAAGGTTGTGCGGCTGAAGCCTACCAGAAAGTTTGCTTACCTGGGGCGTCTGGCTCATGAGGTCGGGTGGAAGTACCAGGCAGTGACAGCTACTCTGGAGGAGAAACGGAAGGAAAAGGCAAAGATCCATTACCGGAAGAAGAAGCAGCTCTTGAGGCTAAGGAAACAGGCAGAAAAGAATGTGGAGAAGAAAATCTGCAAGTTCACAGAGGTCCTCAAGACCAATGGACTCTTGGTGTGAACCCAATAAAGACTGTTTGTGCCTCA
>XM_017589309.1
CGGCTGCCGAAGATGGCGGAGGGGCAGGTTCGGACTCTGCGCGCCGGGCGGTGTGGGGTTGGGGTGGGTTCCAGGAGGGAGCCGAATGGGAGCCCACTGCTCCACTCTGCTTGTGCGATGGGACTTAAGCAAACGTTTTGACGCGAGGGGGTTGTGTAACGTGGGCATAACCAGCCGCGGCAGTCTTTAGGTTCTAGTATTGGATGGCCGGGGCCATCTTCTGGGCCGCCTGGCGGCCATTGTGGCCAAGCAGGTACTGCTGGGCCGAAAGGTGGTGGTTGTACGCTGTGAGGGCATCAACATTTCTGGAAATTTCTACAGAAACAAGTTAAAGTATCTGGCCTTTCTCCGAAAGCGGATGAACACCAACCCGTCTCGAGGCCCCTACCACTTCCGAGCCCCAAGCCGCATTTTTTGGCGCACTGTGCGAGGCATGCTGCCGCACAAGACCAAAAGAGGCCAGGCTGCCCTGGAACGCCTCAAGGTGTTGGATGGGATCCCTCCACCCTATGACAAGAAAAAGCGGATGGTGGTCCCTGCTGCCCTCAAGGTTGTGCGGCTGAAGCCTACCAGAAAGTTTGCTTACCTGGGGCGTCTGGCTCATGAGGTCGGGTGGAAGTACCAGGCAGTGACAGCTACTCTGGAGGAGAAACGGAAGGAAAAGGCAAAGATCCATTACCGGAAGAAGAAGCAGCTCTTGAGGCTAAGGAAACAGGCAGAAAAGAATGTGGAGAAGAAAATCTGCAAGTTCACAGAGGTCCTCAAGACCAATGGACTCTTGGTGTGAACCCAATAAAGACTGTTTGTGCCTCATGCCTGCCTGGCCTGCCCTTCCTCCACCGCCGACCAGGGATGTGGGGACCAAAGGGTCCTTAGTCACTGCTCCTGTAGGTAGAGGGTGCATTTAGACAGCTGAGTGAGAGCTCATCACCTGCTTGAGTTTTACATTATTAAAGTGATAACCATGGAATGACCTGATCTTCAGTGTTCAAAATGAGTAGCAGGGCTGCCCCACCCACCTGCCCCAATACCATATTCTGAAGCTATGAGAAGTGAGGGCTACCCACCTGGGCTAGGACTTAGAAGTTCACACTGAAGATGATGGCCACATTCAGGTGCTGCCTTTGCTCCTGCCCAACAGACCACAAGGCAATATTTTTCTGGAGGGTTCTATGTGCTAATAAATTATTTGACTTAAA