Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name Rpl17
Plot displaying the genomic locations of a parental gene (in chr18) and its retrocopy(ies). Each line represents a retrocopy.
Specie Mus musculus
Full Name ribosomal protein L17
Also known as -
Coordinate chr18:75132049-75136452
Strand +
Gene summary Predicted to enable large ribosomal subunit rRNA binding activity. Predicted to be a structural constituent of ribosome. Predicted to be involved in cytoplasmic translation and positive regulation of G1/S transition of mitotic cell cycle. Located in synapse. Is expressed in brain; central nervous system; embryo; pancreas epithelium; and retina. Orthologous to several human genes including RPL17-C18orf32 (RPL17-C18orf32 readthrough). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Rpl17

Retroname Coord Strand Genomic Region ENSG
Rpl17P1 chr1:16123523-16124144 + Intergenic
ENSMUSG00000100652 UCSC
Rpl17P3 chr1:19390450-19390895 - Intergenic
ENSMUSG00000101117 UCSC
Rpl17P4 chr1:20514341-20515034 - Intragenic
ENSMUSG00000090142 UCSC
Rpl17P5 chr1:39353944-39354567 + Intragenic
ENSMUSG00000092563 UCSC
Rpl17P6 chr1:43309839-43310283 + Intergenic
ENSMUSG00000099694 UCSC
Rpl17P7 chr1:45641186-45641945 + Intergenic
ENSMUSG00000100894 UCSC
Rpl17P8 chr1:61114797-61115416 + Intergenic
ENSMUSG00000082804 UCSC
Rpl17P10 chr1:93234382-93234996 - Intergenic
ENSMUSG00000100351 UCSC
Rpl17P2 chr1:170458481-170459100 + Intergenic
ENSMUSG00000102193 UCSC
Rpl17P39 chr10:7408316-7408942 + Intragenic
ENSMUSG00000112474 UCSC
Rpl17P37 chr10:14462644-14463271 + Intergenic
ENSMUSG00000112490 UCSC
Rpl17P41 chr10:99701247-99701919 - Intergenic
ENSMUSG00000112463 UCSC
Rpl17P42 chr11:26806368-26806913 - Intergenic
ENSMUSG00000080987 UCSC
Rpl17P43 chr11:79342733-79343308 - Intragenic
ENSMUSG00000082529 UCSC
Rpl17P44 chr11:96282904-96283525 + Intergenic
ENSMUSG00000075587 UCSC
Rpl17P45 chr11:99879111-99879464 - Intergenic
ENSMUSG00000082591 UCSC
Rpl17P46 chr12:15915108-15915734 - Intergenic
ENSMUSG00000113222 UCSC
Rpl17P47 chr12:39815307-39815746 + Intergenic
ENSMUSG00000113277 UCSC
Rpl17P48 chr12:67557494-67558113 + Intergenic
ENSMUSG00000113948 UCSC
Rpl17P49 chr12:72095452-72096069 - Intergenic
ENSMUSG00000114155 UCSC
Rpl17P51 chr12:82590374-82590993 + Intergenic
ENSMUSG00000091668 UCSC
Rpl17P52 chr12:90904979-90905147 - Intergenic
ENSMUSG00000113806 UCSC
Rpl17P53 chr12:92127630-92128255 - Intergenic
ENSMUSG00000113643 UCSC
Rpl17P54 chr13:24379880-24380501 + Intragenic
ENSMUSG00000081707 UCSC
Rpl17P55 chr13:29314176-29314738 - Intergenic
ENSMUSG00000082730 UCSC
Rpl17P56 chr13:32068171-32069236 + Intragenic
ENSMUSG00000083149 UCSC
Rpl17P57 chr13:58366497-58367120 + Intergenic
ENSMUSG00000114886 UCSC
Rpl17P58 chr13:65461532-65462165 + Intergenic
ENSMUSG00000114194 UCSC
Rpl17P59 chr13:73977998-73978638 + Intergenic
ENSMUSG00000066714 UCSC
Rpl17P60 chr13:80309425-80310037 + Intergenic
ENSMUSG00000114462 UCSC
Rpl17P61 chr13:99170787-99171302 - Intergenic
ENSMUSG00000114283 UCSC
Rpl17P64 chr14:36745883-36746492 - Intergenic
ENSMUSG00000114739 UCSC
Rpl17P65 chr14:52306912-52307511 + Intergenic
ENSMUSG00000115736 UCSC
Rpl17P67 chr14:70539620-70540380 + Intergenic
ENSMUSG00000115025 UCSC
Rpl17P68 chr14:75501624-75502451 + Intragenic
Intragenic
ENSMUSG00000115789 UCSC
Rpl17P69 chr14:85716429-85717013 + Intergenic
ENSMUSG00000115239 UCSC
Rpl17P62 chr14:103247645-103248375 + Intergenic
ENSMUSG00000115512 UCSC
Rpl17P63 chr14:105529934-105530455 - Intragenic
ENSMUSG00000086260 UCSC
Rpl17P70 chr15:48993973-48994568 - Intergenic
ENSMUSG00000114976 UCSC
Rpl17P71 chr15:59110312-59110887 + Intergenic
ENSMUSG00000115604 UCSC
Rpl17P72 chr16:20615945-20616558 - Intergenic
ENSMUSG00000116776 UCSC
Rpl17P73 chr16:90712031-90712649 + Intergenic
ENSMUSG00000083226 UCSC
Rpl17P74 chr18:38377845-38378468 + Intergenic
ENSMUSG00000066475 UCSC
Rpl17P75 chr18:68301797-68301947 - Intragenic
ENSMUSG00000118306 UCSC
Rpl17P77 chr19:3780435-3781047 - Intergenic
ENSMUSG00000118231 UCSC
Rpl17P12 chr2:22803274-22803859 - Intragenic
ENSMUSG00000081861 UCSC
Rpl17P13 chr2:58978425-58979029 - Intragenic
ENSMUSG00000084250 UCSC
Rpl17P14 chr2:72947159-72947648 + Intragenic
ENSMUSG00000082455 UCSC
Rpl17P11 chr2:166929071-166929694 - Intergenic
ENSMUSG00000081946 UCSC
Rpl17P15 chr3:49485181-49485791 + Intergenic
ENSMUSG00000104437 UCSC
Rpl17P16 chr3:69227344-69227953 - Intragenic
ENSMUSG00000091315 UCSC
Rpl17P17 chr3:78799137-78799766 - Intergenic
ENSMUSG00000091361 UCSC
Rpl17P19 chr4:38263917-38264355 + Intergenic
ENSMUSG00000084148 UCSC
Rpl17P20 chr4:54235641-54235878 - Intergenic
ENSMUSG00000083624 UCSC
Rpl17P21 chr4:63813748-63814361 - Intergenic
ENSMUSG00000084345 UCSC
Rpl17P22 chr4:89079908-89080239 - Intragenic
ENSMUSG00000083989 UCSC
Rpl17P18 chr4:136034866-136035007 - Intergenic
ENSMUSG00000081330 UCSC
Rpl17P25 chr5:22094483-22095094 + Intragenic
ENSMUSG00000090008 UCSC
Rpl17P26 chr5:22817588-22818252 - Intergenic
ENSMUSG00000081855 UCSC
Rpl17P23 chr5:111156321-111156633 - Intragenic
ENSMUSG00000083771 UCSC
Rpl17P24 chr5:138608963-138609581 + Intragenic
ENSMUSG00000081142 UCSC
Rpl17P29 chr6:88859563-88860201 + Intergenic
ENSMUSG00000107432 UCSC
Rpl17P30 chr7:16427711-16428295 - Intergenic
ENSMUSG00000108370 UCSC
Rpl17P32 chr7:35817663-35818286 + Intragenic
ENSMUSG00000066543 UCSC
Rpl17P33 chr7:72298474-72299094 - Intergenic
ENSMUSG00000081895 UCSC
Rpl17P34 chr7:88097853-88098475 - Intragenic
ENSMUSG00000080748 UCSC
Rpl17P36 chr9:75005840-75006459 - Intragenic
ENSMUSG00000090001 UCSC
Rpl17P80 chrX:39225856-39226467 - Intergenic
ENSMUSG00000080996 UCSC
Rpl17P81 chrX:95528465-95529088 + Intergenic
ENSMUSG00000082035 UCSC
Rpl17P78 chrX:111731806-111732455 - Intergenic
ENSMUSG00000083103 UCSC
Rpl17P79 chrX:138157638-138158397 - Intergenic
ENSMUSG00000081869 UCSC
Rpl17P76 chr18:78392973-78393581 + Intragenic
ENSMUSG00000090451 UCSC
Rpl17P9 chr1:77026931-77027546 + Intergenic
N/A UCSC
Rpl17P27 chr6:111669740-111670108 + Intragenic
N/A UCSC
Rpl17P28 chr6:35016039-35016583 + Intragenic
Intragenic
N/A UCSC
Rpl17P31 chr7:27287846-27288172 - Intergenic
N/A UCSC
Rpl17P35 chr9:58115281-58115837 + Intergenic
N/A UCSC
Rpl17P38 chr10:5741991-5742506 + Intergenic
N/A UCSC
Rpl17P40 chr10:84629984-84630608 - Intergenic
N/A UCSC
Rpl17P50 chr12:80966118-80966260 - Intergenic
N/A UCSC
Rpl17P66 chr14:54918554-54919183 + Intragenic
N/A UCSC

Expression

Transcript Sequences

>NM_001002239.3
GAGAGGTCGAGGTCTCATGAATTCTCCCAGTAGCCTTCGCGCTTCCTCTTCCTGTAAGCGGCCAGAGGTCACCTGCCAAGATGGTTCGCTACTCTCTTGAcccagaaaaccccacaaaatCATGCAAATCAAGAGGGTCAAACCTTCGTGTTCACTTTAAGAACACCCGGGAAACTGCCCAGGCCATCAAGGGAATGCATATCCGCAAAGCCACCAAGTATCTGAAGGATGTCACCttaaagaagcaatgtgtgcCATTCCGGCGGTATAATGGTGGAGTTGGTAGGTGCGCCCAGGCCAAACAGTGGGGCTGGACACAGGGTCGGTGGCCAAAAAAGAGTGCTGAATTTTTGCTGCACATGCTTAAAAATGCTGAGAGTAACGCTGAACTTAAGGGTTTAGACGTAGATTCTCTAGTCATTGAACACATCCAGGTGAACAAGGCACCTAAGATGCGCCGACGAACCTACAGAGCTCATGGCCGGATTAACCCATACATGAGCTCCCCCTGCCACATTGAGATGATCctcactgagaaggaacagatcgttccaaagccagaagaggaggttgCACAGAAGAAAAAGATatcccagaagaaactgaagaaacaaaaactcatggcccgggaataaattcagcataaaataaaGGCAGATAAAGTTAAAGGTCTTCTGGTGGTCTTTAATGAGCCCTGTTGGGAGTGAGGTGCTTTAACATGGAGAAGCATGTTATTAAACAGTGAAATAGATGGTTCAAAACCACGTGACCATGT