Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

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Summary

Gene Name Cbx1
Plot displaying the genomic locations of a parental gene (in chr10) and its retrocopy(ies). Each line represents a retrocopy.
Specie Rattus norvegicus
Full Name chromobox 1
Also known as -
Coordinate chr10:84656698-84677112
Strand +
Gene summary Predicted to enable several functions, including histone methyltransferase binding activity; identical protein binding activity; and methylated histone binding activity. Predicted to be involved in cellular response to DNA damage stimulus; chromatin organization; and negative regulation of transcription by RNA polymerase II. Predicted to act upstream of or within negative regulation of transcription, DNA-templated. Predicted to be located in several cellular components, including chromocenter; chromosome; and pronucleus. Predicted to be active in pericentric heterochromatin. Predicted to colocalize with chromosome, telomeric region. Orthologous to human CBX1 (chromobox 1). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Cbx1

Retroname Coord Strand Genomic Region ENSG
Cbx1P1 chr6:101520448-101521177 - Intragenic
 N/A UCSC
Cbx1P2 chrX:106202637-106203600 - Intergenic
 N/A UCSC
Cbx1P3 chrX:31746932-31748889 - Intergenic
 N/A UCSC

Expression

Transcript Sequences

>XM_006247235.3
CGTCTGCGCAGTGCAGGCGGCGGGCCGCGCAGAGTGAGAATCTCTTTTGTTCGGCTGAGGGGAGGGCCGTTGGCCGGGCCTGCGGTACGCCGCTTCATCTGGACGACCGACTTGAGGCCACACGGCTGTTTGCTCCTCTGGGTGCTACTCCCTGGGACCGCCTGACGCAACGCGCAAGAAGCGCGACACCGATTCCTCTCGGACTGTCGGGCGCTGCTACGAGCAGTGTCACCCTTCACACCAGAAAGCTGGCGGGTACTATGGGgaaaaagcaaaacaaaaagaaagtggaagaggtactagaagaagaggaagaggaaTATGTGGTGGAAAAAGTTCTTGATCGGCGAGTTGTCAAGGGCAAGGTGGAATATCTTCTAAAGTGGAAAGGTTTCTCAGATGAGGACAACACTTGGGAGCCAGAAGAGAATCTGGATTGCCCTGACCTTATTGCTGAGTTTCTACAGTCCCAGAAGACAGCTCATGAGACGGATAAATCAGACGGAGGCAAGCGCAAAGCTGATTCTGATTCTGAAGATAAAGGAGAGGAAAGCAAACCAAAGAAGAAGAAAGAAGAGTCAGAAAAGCCACGAGGCTTTGCCCGGGGTCTGGAGCCAGAGCGGATTATTGGAGCTACTGACTCCAGTGGAGAGCTCATGTTCCTGATGAAATGGAAAAACTCTGATGAGGCTGACCTGGTCCCTGCCAAGGAAGCCAATGTCAAGTGCCCACAGGTTGTCATATCCTTCTATGAGGAAAGGCTAACGTGGCATTCCTACCCCTCAGAGGATGATGACAAAAAAGACGACAAGAATTAGCCCTGTTGAGTACCAGCCCCTGTCACCTCTGACTGTGGGTTTCCAGGGGGAGGGAAGGAGCTGTACTTGTCTTGACACCATTGAGGTGGCTTGAGAAGATGTCCTTTGAAGAGCCAGCATAGTTTCTGTGTCCTGCAGCAGCCCAAGTGCTTTAAATTGTTCACACTGTATAGTTTGCACACCCATCCCAGGGGAGGGGAAAGGGTAAGTGTTTCAAGGCTCTGTTCTGCGCTTTACTAAGGAAGGAACAGGCCTTCCATGGAGGACAGAACCCGCAGAACTGGGATGTGGGAAAGCAAAGATACTGTCGATCTTCAAAGAGCATCTCCACAACCCACTGCCTTCTTCCCAATAGTGTTAACTGCATTTTTACAGCCTAGCATGTGTGTAGTTTTTTGGCTATTACTGGTATATTAATTGGgggtgggagggttggggcagggaggaagggagATGGGTAGAATCATTTTGATTAAAATTTGGAGCCTGATTGGGGAAATGGTGAAACAGTAGAACAGTTAACTAATAAATTGGTTCTATGTCCAGAATATTTTGCCTTTTCAAAAAATTGTCATTGGCACCATAAATAAGGACTATGAGAGACTGTTTaaaaaaaaaaaaaagaaaaGTCTGTTAATCCTAAAACCTACAGCCAAGGTGCTCCCAACCTGAGCTCAAAGTAGCCCACAAAGGACAAAGCCAGTTCTGAGTTACCAAAGCTGCCATTTGATGATGGAAACTGACTGGAGAGGGAAAGTTTATTGGAGAGTATTAGAGGCAGACCACTCTGCCTCAGAGGTGCTAATTCTTGAAATTGGAGAAAACCTTTTCCAATTACAAAGTTATAAATATCAGTTTGTCCGTCTAAGCCATTGGCTCAAGTATTGCAGGAGGGCCTATGGGAGATGGAGGAGGGGAGCCTCTGCTCTGGGGGCAAACTCTTGGAGCCCCTCTCGCtttttctttttttttttttctttctttctttttttttttttttttttttttattttgttttttCAGCTTTGAACCCTGAAACTGCTTGTGGCAGGTTCAGTTACTGACAGCACAAATTCCATTGAGTCTATTCAAGGATTGAATGACTTCACAAGCCCTGGTCTCAGGAGATTAACTTTCATATTGGGGTAGTGGTTCACTTGAGAATACAAAATCTTCAGATTAACTGATGTCCAAAATACTGTCTTAAATCATGAGATCCATCAATTTTTAGTATTGTCTAGACCTGCAAATAGAATTACATTGTAAAATCTTTTTCAGCATGTGTTAAGATGTATGTGAAATTTTTTTGTTTAAGTGTAAACTTCATACCATACTGTCAGTTTTTGTCTTAATAAAATTATAGATTTCTAA