Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name Hmgn1
Plot displaying the genomic locations of a parental gene (in chr11) and its retrocopy(ies). Each line represents a retrocopy.
Specie Rattus norvegicus
Full Name high mobility group nucleosome binding domain 1
Also known as -
Coordinate chr11:36474028-36479947
Strand -
Gene summary Predicted to enable chromatin binding activity. Predicted to be involved in chromatin organization. Predicted to act upstream of or within several processes, including nucleotide-excision repair; positive regulation of NAD+ ADP-ribosyltransferase activity; and response to UV. Predicted to be located in nucleoplasm. Predicted to be active in nucleus. Orthologous to human HMGN1 (high mobility group nucleosome binding domain 1). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Hmgn1

Retroname Coord Strand Genomic Region ENSG
Hmgn1P1 chr1:112830489-112831290 + Intergenic
N/A UCSC
Hmgn1P2 chr1:189068942-189069757 + Intergenic
N/A UCSC
Hmgn1P3 chr1:252582020-252582653 - Intergenic
N/A UCSC
Hmgn1P4 chr2:91065204-91065376 + Intergenic
N/A UCSC
Hmgn1P5 chr8:97357590-97358558 - Intragenic
N/A UCSC
Hmgn1P6 chr9:23376760-23377803 + Intragenic
N/A UCSC
Hmgn1P7 chr13:62293452-62294574 - Intergenic
N/A UCSC
Hmgn1P8 chr14:84130166-84131018 + Intergenic
N/A UCSC
Hmgn1P9 chr15:28479049-28479343 + Intergenic
N/A UCSC
Hmgn1P10 chr16:74642535-74643312 - Intragenic
Intragenic
N/A UCSC
Hmgn1P11 chr17:21506561-21507348 - Intergenic
N/A UCSC
Hmgn1P12 chr18:45507998-45508250 - Intergenic
N/A UCSC
Hmgn1P13 chrY:1328751-1329092 + Intragenic
N/A UCSC

Expression

Transcript Sequences

>NM_001013184.1
GTTCGTGTGGTGGCGGCTAGGCAGTGCAGCTCCGTGACAGATCCAACGTCGCACTTGTCTCCCACCCGGCGCCGCCACGATGCCCAAGAGGAAGGTTAGCGCAGATGGAGCGGCGAAGGCGGAGCCCAAGCGCCGCTCCGCGAGGCTGTCGGCCAAGCCCGCCCCTGCCAAGGTGGACGCGAAACCGAAAAAGGCCGCGGGAAAGGATAAAGCATCAGACAAAAAAGCACAGATAAAAGGGAAGAGGGGAGCGAAGGGCAAACAGGCTGAAGTGGCTGACCAGCAAACTACAGATCTGCCTGCAGAAAATGGAGAGACGGAAAACCAGAGTCCAGCCTCTGAGGAAGAGAAAGAAGCGAAGTCTGATTAAGCATCCATCACGTCTGTCAGTGGTCCCTGCCTCCCTTCTTGTACAATCCAGAGGAATATTTTTATCAACTATTTTGTAAATGCAAGTTTTTTAGTAGCTCTAGAAACATTTTTAAAAGGTGAGGGAATCCCACCTCATCCCATTTTTTAAGTGTAAATGGTTTTTTTAAGAGGTTAAATCATTTGCTGGTTGTTTATTTTTTGGTACAACCAGAAAATAGCAGGATACTGAATCAGGAGAGGCTGTGACTGTCTCGGGGGTCACCATAACATTCCGTAGAGGGGGCTAGTTTTATATCCTACAGTACAAAGCATACTAAATGGCAATTTGGGGTCTCAGTCATGCATTCGTGTCTGGAATATTTTCAGTTATATCTGGTCCCGTGTTTCTAGTAGAACCATTTTGTAAGAAAGCCAGTCTTTGGTCCTCGCCCTGTCAGAACTGTGATGTCTGTGGTCATGGCAGTCCATTTTCCTAACAGTTGTGATAATGTGCTGTGAAAGATGGTGATTTTGAGTATGTTCTGTGTGTGACATAAAATTGTGAATTGGTGGAACTGAGCATTGTGAGCATTCGGTTGTTATGAGAGGTCGTAAGGAAACTGGCCAAGTTTGAGGCTGGAGCATCACTGGAATAAGTTCACAGAAAAACAATATGTAGCTCTTCGTTTGGGTACGTGAACACTATTAAGGCTCTTCAGAATTAGGGTACATGAACACTACGGCTCTTCAGAGTTTGGGTACGTGTGTTAAGAATTGGAATGTCTGTGTACTCTACTCCTCGACCAATAAAATCTCAGTTGTGAAAGAGTA