Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name Sppl3
Plot displaying the genomic locations of a parental gene (in chr12) and its retrocopy(ies). Each line represents a retrocopy.
Specie Rattus norvegicus
Full Name signal peptide peptidase like 3
Also known as RGD1562826|Sppl3-ps1
Coordinate chr12:47276485-47360552
Strand -
Gene summary Predicted to enable aspartic endopeptidase activity, intramembrane cleaving and protein homodimerization activity. Predicted to be involved in several processes, including T cell receptor signaling pathway; positive regulation of calcineurin-NFAT signaling cascade; and proteolysis. Predicted to be located in endoplasmic reticulum-Golgi intermediate compartment membrane; plasma membrane; and rough endoplasmic reticulum. Predicted to be active in Golgi-associated vesicle membrane. Predicted to be integral component of cytoplasmic side of endoplasmic reticulum membrane and integral component of lumenal side of endoplasmic reticulum membrane. Orthologous to human SPPL3 (signal peptide peptidase like 3). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Sppl3

Retroname Coord Strand Genomic Region ENSG
Sppl3P1 chr5:86865748-86867294 + Intergenic
N/A UCSC

Expression

Transcript Sequences

>XM_003751200.3
CGGAGCCCGAGTGCCCGTCCGCCGTGCGAGCGAGCCGCCGGGCCCCCGGCCGCGCCCTCTGCCGCCGGCCGAGCGAGCCGCGGAGCCCCGAGAGGCAGCACCATGGCGGAGCAGACCTATTCGTGGGCCTATTCCCTGGTGGATTCCAGTCAAGTGTCGACATTTCTGATATCCATTCTTCTGATAGTCTATGGTAGTTTCAGGTCTCTTAATATGGACTTTGAGAACCAAGATAAGGAGAAAGACAGCAGCAGTAGTTCTGGCCCTTTCAACGGCAGCAGCACCAATAACAGCATTCAGACCATTGACTCCACCCAAGCTCTGTTCCTTCCGATTGGAGCGTCCGTCTCTCTCCTAGTCATGTTCTTCTTCTTTGACTCAGTTCAAGTCGTTTTCACAATATGTACAGCAGTTCTTGCAACAATAGCTTTTGCTTTTCTTCTTCTCCCAATGTGCCAGTATTTAACAAGACCCTGCTCACCTCAGAATAAGATTTCCTTCGGTTGCTGTGGGCGTTTCACTGCTGCCGAGCTGCTGTCCTTCTCCCTGTCAGTCATGCTTGTCCTCATCTGGGTTCTCACTGGACACTGGCTTCTTATGGACGCTCTGGCCATGGGTCTCTGTGTCGCCATGATCGCCTTCGTCCGCCTGCCAAGCCTCAAGGTTTCCTGCCTGCTTCTCTCAGGGCTTCTCATCTACGATGTCTTCTGGGTGTTTTTCTCGGCCTACATCTTCAACAGCAATGTCATGGTGAAAGTGGCCACACAGCCAGCTGACAATCCCCTCGACGTTCTGTCCCGCAAGCTCCACCTGGGACCCAATGTGGGGCGTGATGTTCCTCGCCTGTCTTTGCCTGGAAAGTTGGTCTTCCCAAGCTCCACGGGCAGTCACTTCTCTATGTTGGGCATCGGGGACATTGTGATGCCCGGCCTCCTGTTATGCTTTGTTCTTCGCTACGACAACTACAAGAAACAAGCCAGCGGCGACTCCTGTGGGGCCCCTGGCCCGGCAAACATCTCTGGGCGCATGCAGAGGGTCTCCTACTTCCACTGCACCCTCATCGGGTACTTTGTAGGTCTGCTCACCGCAACTGTGGCGTCTCGCATCCACCGGGCCGCCCAGCCAGCCCTCCTCTACTTGGTGCCATTCACCTTATTGCCGCTCCTCACCATGGCCTACTTAAAGGGTGACTTACGAAGGATGTGGTCTGAGCCATTCCACTCCAAGTCCAGCAGCTCCCGCTTCCTGGAAGTATGATGGGCAGTGTGAGAAGGGACCAGAGCGCCGGCTCCGCCCTGTTCTCTCACCACGTGGTTTTGTTCTCTCTACAAGCTGGCCTGGACTCAAGAGGCACGCCTGCTCACAGAACTGCGGTGTGGCTGCAGTCTGCGTCTGAGGGTAGCGTTCCCAGAGGGTGCTGGAGCCCTGCCGAGGGAGCCTTCTCTTCTGTGCTCTGGGAGAGTGGACCCTTGAGAAGGGGCAGGCCCTCCGGTGCTCCTTCTGTCTTCATGGATCTGCACCAGACTGTTAACTTGTGGGGAGAAGTTGACTTATTTAAAAACTACAAAAAGCAAGGAGTTGTTCTAGAACTTTGAACACTAAACGGTCGAAAATCAGTGAACCCCAAAACTTTGGGGCCAGTTTTCCTCGGGGGCTCCACTTCAGAGACCTAGGGCCGAACATCTCGTCTGCCctattcttttctttttctttttttcttttGGATTTATTAAATATTTTCTGTGGTGTGAAGTGACTTATTAAATCCACAGACATTGAATGACTTCTTACAACGTACACATAAGAATTTGTTGTAATGACTGTGTCCAACCGTGTTGGCAGTGAGCAGGACACGGTTTtatacatacgtacatatatatatatatataCGTGCACATAGATACCTATGAGTAAACAGCCACTAAACCTGCTAAGATCATGCCGTGTAGCAGACGGGCTTGCTGTCATTTGAGCATGTAGAACAGTTTACCGTGGCTTCCTCGCATAAGCTGCCGTCTCCTGTGTGAGTCACGTGCAGTTGTAAGCTGTGGGCGCGTTGAACTGATACTCGTGGGCTGTGGGGGCTCCTTCTTTTGATCAGTGTAGCAAAATTAGGGATGAAAAGTTTGAACTTTTTGACCCTTTTCTTTTTACAGGCTTCTTCCTCGCAGTTTTTAGTAACCGCCTCTTGAACCAGTGCATGTATTATAGCAGTCTTTGTGCTTTCTGATCATAGTAACAGACTACCTGTAAATACAtttttctattttatatttttttgtattttttttGACATTTTGTTTCATTGGTGCGCTGTATTTTCCATGCCCTCAGACCCTTAGAAGAAAAAAAAAAACAGAAAAGCAGCGCAATGCTGTCCTTGCTGTTGTGATTACAGTCTCAGCTTACCTGTGGTGACAGCTGGGCTTTGGGGACAGATGTCAGTTACCTCTGCAAATGGAACTGATGTCCAGGAGCTGGAGACAGAGCAGGCTGCTACTGTGACTTCAGAACCTGGCCCCGCGCTGTCCGTGGGCGTGCAGAGTCTGGTGTGACCTCACCTTCATCTCAGACTGGTAAGCTGCTGCTGCCCCCCCGGGGGGTGAGACGGCAGAGTACACAGCCTGAGCCCGGCGTGTCAACGGAGCAGCGTGCCGCCATGCTGTTGGTTCCTCTGTCCTCCTCAAACTCTGCCGAAGGGTTTGAAGGGTTGGTTTTGTCTCTAATAAATGACTCCTTTTTCTA