Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

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Summary

Gene Name Alg11
Plot displaying the genomic locations of a parental gene (in chr16) and its retrocopy(ies). Each line represents a retrocopy.
Specie Rattus norvegicus
Full Name ALG11, alpha-1,2-mannosyltransferase
Also known as RGD1564725
Coordinate chr16:74854007-74866096
Strand -
Gene summary Predicted to enable GDP-Man:Man3GlcNAc2-PP-Dol alpha-1,2-mannosyltransferase activity. Predicted to be involved in oligosaccharide-lipid intermediate biosynthetic process and protein N-linked glycosylation. Predicted to be integral component of membrane. Predicted to be active in endoplasmic reticulum membrane. Human ortholog(s) of this gene implicated in congenital disorder of glycosylation Ip. Orthologous to human ALG11 (ALG11 alpha-1,2-mannosyltransferase). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Alg11

Retroname Coord Strand Genomic Region ENSG
Alg11P1 chr3:22962304-22963957 + Intergenic
 N/A UCSC
Alg11P2 chr4:139023860-139025162 - Intergenic
 N/A UCSC
Alg11P3 chr6:77680297-77682234 + Intragenic
 N/A UCSC

Expression

Transcript Sequences

>NM_001108401.1
GGGCTAAGATGGCGGCGGACACAGGGAGCTGGTGCGTGTACGCAGTGCTGCGATTTTTTTATTCACTCTTCTTTCCTGGACTAATTATATGTGGAGTTCTGTGCGTATATTTGGTCATTGGCCTTTGGGTTATCAGGAGACATCTACAGAGGAAGAAAAAGTCAGCCTCAACCAGCAAAAATGGAAAAGATCAAATGGTGGTTGCATTTTTCCATCCATACTGCAATGCAGGCGGAGGAGGAGAGAGAGTTCTGTGGTGTGCTTTGAGAGCCCTGCAGAAAAAGTATCCTGATGCAGTCTATGTTGTGTATACTGGTGACATTCATGTCAGTGGTCAACAGATACTGGAAGGTGCTTTCAGAAGGTTTAACATCAAGTTGGTTCACCCAGTGCAGTTTGTTTTCTTAAGGAAACGCTACCTTGTGGAAGATTCTCGCTATCCTCACTTCACATTGCTAGGCCAAAGTCTCGGCTCCATTCTTCTTGGCTGGGAAGCTCTGATGCAGCGTGTTCCCGATGTGTACATCGATTCGATGGGCTACGCCTTCACACTGCCTCTGTTTAAATATGTGGGAGGTTGCCGAGTTGGGAGCTACGTTCACTATCCCACTATCAGCACAGACATGCTGTCTGTGGTGAAGAATCAAAATCCTGGATTTAATAACGCTGCTTTCATTAGCAGAAACGCTCTCCTCAGCAAAGCAAAGCTCATCTACTACTATTTATTTGCTTTTGTTTATGGCCTTGTTGGATCTTGCAGTGACATAGTCATGGTTAATTCTTCATGGACACTAAACCATATTCTCTCACTGTGGAAAGTCGGGCATTGCACTAACATTGTTTATCCACCTTGTGATGTGCAGACATTTCTGGACATCCCTTTACATGAGAAAAAGGTGACCCCAGGGCATTTACTGGTTTCCATTGGCCAGTTCAGGCCGGAAAAGAATCATGCTTTGCAGATCAAAGCCTTTGCTAAGTTGCTAAATGAGAAGGCAGCTGAGTCCCGCCATTCTCTAAAACTTGTCCTTATTGGAGGATGTCGCAACAAAGATGATGAGTTTAGAGTAAACCAACTGAGAAGACTGTCTGAGAATTTGGGAGTTCAAGAAAATGTGGAATTTAAAATAAACATTTCATTCGATGAATTGAAGAATTACTTGTCTGAAGCAACAATCGGTCTGCATACCATGTGGAATGAGCATTTTGGGATTGGAGTTGTCGAGTGTATGGCGGCTGGTACAATTATCCTCGCACACAATTCCGGAGGCCCAAAGCTTGACATCGTCATTCCTCATGAAGGACAGATAACTGGATTTCTGGCTGAGAGTGAAGAAGGCTATGCTGAAACCATGGCCCATATTCTCTCTCTGTCCCCAGAAAAGAGACTTCGAATCAGGGAAACTGCTAGAGCATCTCTGAGCAGGTTTTCCGACCAGGAGTTTGAAGTAGCATTCCTGTGTTCCGTGGGGAAGCTGCTTACTTAATGCCCGGTCTGCACGTTCTCCATGTTTCATACAGTGTGGAGCTGGAGACAGTGGGAGAGCCTGGGCTTGGTGTGTGCAGTCCCCAGTTCATCTCCAGCACCAAAAGTAAAAGGAAATACCGTCACGTGTAAATATTTTCTAACTTTATTCTTTATTGTAATAAAAGCAGCCTG
>XM_006253356.3
AGGCAAGACAAAATATTTTAAAACAACACACAAATCTTCAAGAATTCTTCACATGCCCGCGACCTACAAGTTTCAGTATTTGCTCATTGGAGACGCACATGAAGAAAAGAACTGAAAAAGAGACCTGATTTTCTCGAGCTAAATATTTCTGTGCTGTGTGCATCTTTAAGGGACTGCATTAATTAACCGCTTGTATTATTAAAATGAACGCCTTTAAGCTACAGGACTTGGATGTAGACCGTTTGAGAagccaggcattagccaggcattagccaggcattagcACTCCTAGGCGCAACCAGAGTTTTTTCACAGCAACACCACGACCAGGGAAAGTGCTAGGCTCGACACGGTTGAACACCAGAGGGCTGGCGAGTGGCACCCTTGATCTAGAGGGCTTTCCGCCCAAGCCACTCCTTGAGCTGGATTCTCGGGGGTACGTGTCCTCAGTCACGAGTACTGGAGGAACAGAGGAAAATTGCGCTTCGGGCAGATTTTTTTATTCACTCTTCTTTCCTGGACTAATTATATGTGGAGTTCTGTGCGTATATTTGGTCATTGGCCTTTGGGTTATCAGGAGACATCTACAGAGGAAGAAAAAGTCAGCCTCAACCAGCAAAAATGGAAAAGATCAAATGGTGGTTGCATTTTTCCATCCATACTGCAATGCAGGCGGAGGAGGAGAGAGAGTTCTGTGGTGTGCTTTGAGAGCCCTGCAGAAAAAGTATCCTGATGCAGTCTATGTTGTGTATACTGGTGACATTCATGTCAGTGGTCAACAGATACTGGAAGGTGCTTTCAGAAGGTTTAACATCAAGTTGGTTCACCCAGTGCAGTTTGTTTTCTTAAGGAAACGCTACCTTGTGGAAGATTCTCGCTATCCTCACTTCACATTGCTAGGCCAAAGTCTCGGCTCCATTCTTCTTGGCTGGGAAGCTCTGATGCAGCGTGTTCCCGATGTGTACATCGATTCGATGGGCTACGCCTTCACACTGCCTCTGTTTAAATATGTGGGAGGTTGCCGAGTTGGGAGCTACGTTCACTATCCCACTATCAGCACAGACATGCTGTCTGTGGTGAAGAATCAAAATCCTGGATTTAATAACGCTGCTTTCATTAGCAGAAACGCTCTCCTCAGCAAAGCAAAGCTCATCTACTACTATTTATTTGCTTTTGTTTATGGCCTTGTTGGATCTTGCAGTGACATAGTCATGGTTAATTCTTCATGGACACTAAACCATATTCTCTCACTGTGGAAAGTCGGGCATTGCACTAACATTGTTTATCCACCTTGTGATGTGCAGACATTTCTGGACATCCCTTTACATGAGAAAAAGGTGACCCCAGGGCATTTACTGGTTTCCATTGGCCAGTTCAGGCCGGAAAAGAATCATGCTTTGCAGATCAAAGCCTTTGCTAAGTTGCTAAATGAGAAGGCAGCTGAGTCCCGCCATTCTCTAAAACTTGTCCTTATTGGAGGATGTCGCAACAAAGATGATGAGTTTAGAGTAAACCAACTGAGAAGACTGTCTGAGAATTTGGGAGTTCAAGAAAATGTGGAATTTAAAATAAACATTTCATTCGATGAATTGAAGAATTACTTGTCTGAAGCAACAATCGGTCTGCATACCATGTGGAATGAGCATTTTGGGATTGGAGTTGTCGAGTGTATGGCGGCTGGTACAATTATCCTCGCACACAATTCCGGAGGCCCAAAGCTTGACATCGTCATTCCTCATGAAGGACAGATAACTGGATTTCTGGCTGAGAGTGAAGAAGGCTATGCTGAAACCATGGCCCATATTCTCTCTCTGTCCCCAGAAAAGAGACTTCGAATCAGGGAAACTGCTAGAGCATCTCTGAGCAGGTTTTCCGACCAGGAGTTTGAAGTAGCATTCCTGTGTTCCGTGGGGAAGCTGCTTACTTAATGCCCGGTCTGCACGTTCTCCATGTTTCATACAGTGTGGAGCTGGAGACAGTGGGAGAGCCTGGGCTTGGTGTGTGCAGTCCCCAGTTCATCTCCAGCACCAAAAGTAAAAGGAAATACCGTCACGTGTAAATATTTTCTAACTTTATTCTTTATTGTAATAAAAGCAGCCTGAACAATATTCTTAGCAACATGTGTGTAGACAGGGCAGTAGTTAACAAAAACAGCAGAACTAATCTATATGGAAAACGTAATCTTGAGTATTTTCTCttttgcttttttgagacagggcttctctgtatagccttggctgttctagaactcactctgtagactaggctggccttgaactcagagagatccgcccgcctttgtctcccaaatgctggaactaaaggtgtgccactgcacccagctTCATGTAGCTTAATGTACAGATTTTACTTACTGTTTGGTCTCAAAGTCTGAACAGTACAGATCTCAAAGAAAACTACCAATCAAATTTTCATATACTCATGCATCTTTTTAATTTAATATTTTCCTTTCCTTGTcttaatccttgaatgctcctgcctccacctcccagaatgcaccagtgtatgcagaacttgcagaactgatggtggagcccagggcctcagtctagacaagcactctaccaactgagctgcatcctgaaccccAAGTCCTGCTTTTCAAACCACTTTTGCTTTAGAAAACATAAAATAACACTCCTGGGGTTCTAGTTTGTTTTATGATGATGGAGGACCATGTAGCACCTCAAACTGTAAGGAAGAACAGGGCCGTGAATGCTAACACCTCAGAGTGCCCTGAGCTGATCTCAGACTTCCTTCCAGAGGAAAAGGAAGTGCTGAGAGAAACAGCAGGTTATCAACTGGCACTTTAAAATATATTTGTAAATTTTTGGATTAGATTCTGTTTGACAGGTGGGTTCAGGGTTAGAGATTGAACCTAGAGACATACTCGTGGCACACAAGTGTTCTAACCCATAAGCTACTTTACCTCAACCCCAGGAGTCCGAAAATAATAGCATGGGTAACCCTTTTAAGTATACCTACTAATTTTCTTAAAAGGAAAAAGAAACTTCAAACAGGCATCTCTAATCCTATTCCTCAAGTATCAGATGGGGTGGGCTGATTTCTTCAATGGGTGCATACGATATGTTTAAGTCAAAACAGGCAGCAATCTCTCCCAGAACGAGGTTTCTGTGGAAATTGGGTTCTGTTTAGCACCCACCCCAGTTCATCTGTATGGGTTTCTCATCTCTTAACAGACCACTGAAGGCTAAAAGTCAGCCTCAGTTCATTCAAGAGAACATCAAGCTGAGTTGCTCTTCTGAAACTGACCATGTTGTATGATCCTGCCCACATACTGTGAAAGACCATGAATGGCATTTTGAAAGAAAGTGCCAAGTGGTAGTTTTCATACTGGGCTGCCTCACTTCAGTTACAAATAGCTGACCTGCTAACACTGAAAGCTATGCCTCAACCTTTGGGGTGGTTTTCTTCTGAAGTCAAAGTATTTATTAATACCTTCAGCATTATGGTAACCAGATGTGAAGTATATGAAGCCTCCCTGAAGATTTTAAACTTTGATTTAGTTAAAAGTAACCAAAGATTCAGTGATCTGATAGAAATGTGAAAAGGTGTGGGGGCTGGGGACACTTTTAGGGAAGGAGATAGATAAAGGAGGGAGGTCAGAAAAATAAAAATAAGGACACCTGAAAAGCCATAAGGAATCATTCTATTAAGTATTTACCAATAACAGCAACAAACtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtATTtctgtgtataagtacacatgtagttttaatgagcttttctcttctactggaatgacagatgacccaaagaccaacacacacacacacacacacaaaacccaacaccagacatgagaagtgtcttttgagtttttggccagggctatccaaaagactccccaaagcatacagcctattatccttgcttaccccagaggtgaaagataagtccaaactgctgaaaacacaatgtactttagaaacaagccaaaagacccctgagctggaactgacctgaaaatgcacacagagagagctgttgctgccccaggactaactttcatgttatgaaggtgccaggcaaccttccaaaggagaggggcaaccaacggtccgacccagttctcccacctgtaaaccacattgaaaaccagcacagcacacacacttgacagtaaccaacagctcttcaattagacacacgacctgctcaactagagggggaacctagctaaactattcaatgctacagaacagccactatttactaaaccagcctgattcctaacaacaatctaaacattgtctagactcttaaagtgtacagttcctcaAGTATGACCTACAAACTAATGCCAACTTACACATTTTCTCTCTTTAAGTGACAATGCATTTCACCAAGGACTTTACTAGACTTCTGGAGATCTTACTGTGAGTGATATAGAGGACTGCTGGCTGTTTACCAAGTAATTTAGCACTGTAAAAACCATTCTTAAAACTTTTTTTTTTTTACAAAAATTAACAACCAGAAGTAAAGGTTTTCTGTACCCATTATTACAGATGTGTTTACAACTCTGTAGTTTCTTGGTTTCTTAGCCAGTAGGTGAAAATCGGTATAAATTTCTCCTGGCCTCCATTCTGCATAACTGGCAGCTGTGGGGGCTGAGGGTGTGACTTGGAGAAGCTGGCTGTAATACATGAGCAAGCTTGAGCCACAGCACAGCAACACATGAATGTGTGTAGAGATAGGACTGTGAGGGCAGCATGTGCTGTTCTGTTCATACATCGTGCCTTGTAATTAAATGAATTGCCCACACAGCTTGACATTTGTGTTGAGGCATTCAAAGGAGTCACACTGTCTCTTCCAGCCAgttggttggttttggttgttagttgttttgctttgtttgGATCTAGCTAGCTTCATTATCTACTCCCAGTTACATTGTTGATTCACTACAATGGGAACTCAGCTAACCAGACAGTCCCCAGCGAGACAGACTCTTACACATTCTCTATTTTATTTTCAACTTTACAGACAAAAACCATTTAAAGAACTGAGTAGATCTTCATTGGCTGTTTAATGACAGAATCAGGATTATGGCCTGGTATTCTGACTCTTGGCCTACTCTGTCATGTTAAGACCAGTCTTTGAGGTAAAATTTGTCGATAGCCCACACAGCCTACCCATCCACATACAGTAATAGGACTAAAGATTATAGGAATTGGGATGAACATAAATAGGGGGTGTGGTGAAAGAAGAAATGATCCTCAATTTCTTAAAAACACTTTTACACTAACTTTTCAAAATTATGTATTAAGAGTATATGATTCACATATTTTTCCAGCCTTCCTAATAAGTTTTAGAGATATTTATTTTTTACTAGATTTCAGGTAGGTACTCTGTGAAATGTTGAGGCTCATCTGTTTCTAGGAGGCTTCTGAGTGGTTGTTAAGTGGTCCAAGCAGTGGGGGTTCACATTCCTGCTTACAGGGATACTGCAACTGTGAAGTGTATGGTACATACTCTTTGTATAATATATTTATATCTAATTGTGAGGTAGAGCTATTGATACGAAACTATCTAAATGTGGCAAGTGATTTCTTTGAttcaattaaagtgtttttgcatca