Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

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Summary

Gene Name Lsm14a
Plot displaying the genomic locations of a parental gene (in chr1) and its retrocopy(ies). Each line represents a retrocopy.
Specie Rattus norvegicus
Full Name LSM14A mRNA processing body assembly factor
Also known as RGD1305695
Coordinate chr1:90200866-90246292
Strand -
Gene summary Predicted to enable nucleic acid binding activity. Predicted to be involved in negative regulation of translation and non-membrane-bounded organelle assembly. Predicted to act upstream of or within RIG-I signaling pathway and positive regulation of type I interferon-mediated signaling pathway. Predicted to be located in cytoplasmic stress granule; cytosol; and mitotic spindle. Predicted to be part of messenger ribonucleoprotein complex. Predicted to be active in P-body. Orthologous to human LSM14A (LSM14A mRNA processing body assembly factor). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Lsm14a

Retroname Coord Strand Genomic Region ENSG
Lsm14aP1 chr8:52696224-52699786 - Intergenic
 N/A UCSC

Expression

Transcript Sequences

>XM_006228856.2
GCTGGGGGAAGGGTAAGCGGAGCCGGCGCAGCCGCCATGTTGGTTCTGAAGAAGCTGCTGTgagcgccgacggagcgagcgggcgggcgtgcggagcggcgggcgcagcgcgggatctgcctgagtgcgagcggcgggcgacggcggcggcgCCATGAGCGGGGGCACCCCTTACATCGGCAGCAAGATCAGCCTCATCTCCAAGGCGGAGATCCGCTACGAGGGCATCCTCTACACCATCGACACCGAGAACTCCACTGTAGCCCTCGCCAAAGTTCGATCCTTCGGTACAGAAGACAGACCAACAGATCGTCCAATACCGCCTCGAGATGAAGTCTTTGAATATATTATATTCCGGGGAAGTGACATTAAAGACCTCACTGTTTGTGAGCCGCCCAAACCACAGTGTTCTTTGCCTCAGGACCCAGCTATTGTTCAGTCTTCACTAGGTTCGTCATCTTCCTCGTTCCAGTCAGTGGGTTCCTATGGACCTTTTGGCAGGATGCCAGCATACAGTCAGTTCAGTCCAAGTACATTAGTTGGGCAACAGTTTGGTGCTGTTGGTGTTGCTGGGAGCTCCTTGACATCCTTTGGAACAGAAGCATCAAATAGTGGTACCTTATCCCAGAGCAATGCAGTTGGTTCGGCCTTCACGCAGGATACAAGATCTGTAAAACCACAGCTGGCCCAAGGTCGATCAAGCCCTCAGTTAGACCCTTTGAGAAAAAGTCCAACCATGGAACAAGCAGTGCAGACCGCCTCGGCCCACTTACCTGCTCCAGCACCTGTTGGGAGAAGGAGCCCTGTACCCGCCAGGCCTTTGCCACCTACCAGCCAGAAAGCAATAGACAACCAAGAGCACAGGCGAGCTGAAGTTCACAAAGTCCCAAGGCCAGAAAATGAGCAACTCAGAAATGACAGCAAGAGGCAAGTAGTTCCTGGAGTTCCTTCTGCTCCAAGAAGAGGACGTGGGGGTCATCGAGGTGGCAGGGGAAGATTTGGTATTCGTCGAGATGGTCCAATGAAATTTGAGAAAGACTTTGACTTTGAAAGTGCAAATGCACAATTTAACAAGGAGGAAATCGACAGAGAGTTTCATAATAAACTTAAATTAAAAGAAGATAAACTTGAGAAACAAGAGAAACCTGTAAACGGTGAAGACAAAGGAGACTCGGGAGTTGATACCCAGAACAGCGAGGGGAATGCTGATGAGGAAGATCCCCTTGGGCCCAACTGCTACTACGACAAAACCAAATCCTTCTTCGACAACATCTCTTGTGATGATAATAGAGAAAGGAGACCAACTTGGGCTGAAGAAAGAAGGTTAAATGCTGAAACTTTTGGAATCCCACTTCGTCCAAATCGTGGCCGTGGGGGTTACCGAGGCAGAGGAGGCCTTGGCTTCCGTGGTGGCAGAGGACGTGGTAGTGGCCGAGGAGGAACCTTCACTGCCCCTCGAGGGTTTCGTGCTGGATTCAGAGGCGCTCGTGGGGGTAGGGAGTTTGCAGATTTTGAATATAGGAAAGACAACAAAGTTGCTGCATAGTCTACAAACAAGTCTCTGAACATAGGTGACTCCTAGCTCTTCATGGTCCTGGAAAGTGGTTCGGTCTTTGTGAAGAATGAAGAAGTGAAGTTGCTGTCTGTCTGTCACCAGCACTGGGTTTTGTCTGTTTTCTGCTTCACGTCAAAGCTATACTGCAGTTGCTTTGGGGCAGGAAGGCTCGTCTTAAAACACAAGCATAAGTGTGTGTGGAGTAGCAGGTTATGATTCCTTGCTTAGAGTTGAACTAAAGCCAGCTAAATGGAATTGCTAAGTGTTTTTTCTTCAATGAAAGGATTTTTCTTATCACTAATTAATTGTATTCGGCAATTACTTTGAGTTGCCTGCAGATAGGCCGTGATACTGTGTTTTGAGCCACAGAAAGTTTTGTGTGTGTGCGCGCGCGCGCgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtacgtgtgtgtCCCATAATATGAGGTAGCTTATTTCGACACTTAATTAGGGTGCTGGATGGTAGAGAATTTGGTCAGTCAACTATGTACACACAGGTAAATACTGTTTCTTGGGCAAAGGTAACTTTTTTATATAGTTGTAAAATTCCATTATATTCCATTGCCAAAGAAACATTAAGAACTTTGTATAGCTGTATAAAAAGCAACTAATTTTTTAAAGAATAAACGTTTTAAAGTCAGCAAACATACGTGTCCTTGCAGAAGTCAGTGTGCTGAGGAGCAGGGATATGGGTGGGTCTTTTTCCCCTTGCTTTCCAGGCTTAAGGTTTTTTATTTCCTTTGTAATGTTTGGAACACAAATGAAGATTTGATAACTTTATTCCATTATCTAAAAAGCATAAATTATTCATGCATAGTGTATGGACTTCGTTTTGTAGCAAATCACAGGATTTGTTCAAATAACAGATATTTTAAGTGTGTGAATGTAAATAATCATAGATGAGAATGTACCTTGCTGTATTTTCAAATAAGTAACCTTCTCCTTTTTAAGACATTAAGACTCGTTGATCTATCAGTTGACCCGCTCCTCCTGCTATGCCTGGAATTCTGTTGTGGTAATGCTGACTCCTGTTTTCCATCAAAAAGATGGAGTTTTCAGAATCATCTGGCACCTGTAAAACATCACTAACATAGTGTGTAGGCCTGCGGCCTACCGATGACTCTGTACACGTTTGTTGCTAACTGTAAATTACTAATAAATCTTTTTTGATATTTAAGCTATAGTGGAAAAAGATCTGGCCACTTTGTGTTTTTAATAAAGGCCATGGAATAAAGGGATCCAAAGATTTCAATATTTTTAACTA