Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

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Summary

Gene Name Ifitm3
Plot displaying the genomic locations of a parental gene (in chr1) and its retrocopy(ies). Each line represents a retrocopy.
Specie Rattus norvegicus
Full Name interferon induced transmembrane protein 3
Also known as DSPA2b|rat8
Coordinate chr1:213810712-213811821
Strand -
Gene summary Involved in cardiac muscle cell differentiation. Predicted to be located in several cellular components, including bounding membrane of organelle; cell surface; and endoplasmic reticulum. Predicted to be part of protein-containing complex. Human ortholog(s) of this gene implicated in COVID-19; adenosquamous gallbladder carcinoma; and gallbladder adenocarcinoma. Orthologous to several human genes including IFITM3 (interferon induced transmembrane protein 3). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Ifitm3

Retroname Coord Strand Genomic Region ENSG
Ifitm3P1 chr11:34037050-34037657 + Intergenic
 N/A UCSC
Ifitm3P2 chr14:65152461-65152975 - Intergenic
 N/A UCSC

Expression

Transcript Sequences

>NM_001136124.1
ACAGAGCCACAGAACTCTCCTCTACCTTTCGCTGCTGCTTTTGCTCGGTACCATGAACCACACTTCTCAAGCCTTCGTGAACGCTGCCACTGGGGGACAACCCCCAAACTACGAAAGAATCAAGGAAGAATATGAGGTGTCTGAACTGGGGGCACCCCACGGATCGGCTTCTGTCAGAACTACCGTGATCAACATGCCCAGAGAGGTCTCTGTGCCTGACCATGTGGTCTGGTCCCTGTTCAATACGCTCTTCATGAACTTCTGCTGCCTGGGCTTCATTGCCTATGCCTACTCTGTGAAGTCTAGGGATCGGAAGATGGTGGGTGATATGACTGGAGCCCAGGCCTACGCATCCACTGCCAAATGCCTGAACATCAGCTCCCTGGTCCTCAGCATCCTCATGGTCATTATCACTATTGTTACTGTCGTCATCATTGCTCTTAATGCTCCTCGTCTCCAGACTTGATAGAGGATTCTGGTTTCTGATCCTGACGTGCTCCACCATCTGCAGCTGCATCCCTCCTTGCCCCTCTGCCCCTCCCGACACGCAGGTGTAACACTCATCTATCCACAATGGATTCAATAAAACGCACTTGATAGCCAT