Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

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Summary

Gene Name Rsrc1
Plot displaying the genomic locations of a parental gene (in chr2) and its retrocopy(ies). Each line represents a retrocopy.
Specie Rattus norvegicus
Full Name arginine and serine rich coiled-coil 1
Also known as RGD1304968|SRrp53
Coordinate chr2:164126898-164533652
Strand +
Gene summary Predicted to be involved in alternative mRNA splicing, via spliceosome and nucleocytoplasmic transport. Predicted to act upstream of or within RNA splicing; protein phosphorylation; and response to antibiotic. Predicted to be located in nuclear speck. Predicted to be active in cytoplasm and nucleus. Human ortholog(s) of this gene implicated in autosomal recessive non-syndromic intellectual disability. Orthologous to human RSRC1 (arginine and serine rich coiled-coil 1). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Rsrc1

Retroname Coord Strand Genomic Region ENSG
Rsrc1P1 chr1:43933244-43934622 - Intergenic
 N/A UCSC
Rsrc1P2 chr7:43601412-43602764 + Intragenic
 N/A UCSC
Rsrc1P3 chr11:13530286-13531552 - Intergenic
 N/A UCSC

Expression

Transcript Sequences

>XM_008761055.1
TCGGCTGACGCTGCCTGGTGCTGGAACCAGGAAGGCGCTGAGCTTAAATTGAAGCAAGTTCTGAGGACGCCGGTGGCGCCGAGGTTAGAAGAGGGGGTTCCAGGTCCCCACATCAAGAGGTGCGAACCCGAAGGTCGACCCAGAAATGGGACGCCGGTCTTCAGACACTGAAGAAGAAAGCAGAAGCAAGAGGAAAAAGAAACACAGGAGGCGGTCATCTTCAAGCAGCTCTTCAGACAGCAGGACGTACAGCCGCAAGAAGGGTGGGAGGAGGCCAAGGTCGGAGTCACGATCCTGGTCTAGAGACCGCCAGCCTCGCTCACATTCTTATGAGAGAAGACGCAGGCGCAGGTCAAGCAGCAGCTCTTCTTATGGCTCCAGAAGAAAACGCAGTCGCAGTCGTTCCAGGGGCCGAGGGAAGTCCTATAGAGTTCAGAGGTCTCGGTCAAAAAGCAGAACAAGAAGGTCCAGGTCAAGACCTCGTCCACGCTCACATAGTAGAAGCAGTGAAAGATCCAGTCACAGAAGAACTCGTAGTAGGTCcagggacagagacagacgtaaagttcgggacaaagagaagagagaaaaggagaaggataaaggcaaagacaaagAGGCGCACACCATCAAACGCGGGGATTGTGGAAACATCAAAGCTGGATTAGAACATCTGCCTCCAGCTGAGCAGGCCAAAGCCAGACTTCAATTGGTCCTTGAAGCTGCTGCAAAAGCTGATGAAGCATTAAAAGCCAaagaaaggaatgaggaagaagcaaagagaagaaaagaagaagACCAAGCCACCCTGGGAGAACAAGTAAAAAGAGTAAAAGAAATCGAAGCAATTGAAAGTGATTCTTTTGTTCAGCAGACATTCAGATCAAGTAAAGATGTCAAAAAGTCGGTAGAGCCGAGTGAGGTGAAGCATGTGACTCCAGCCTCAGGACCAGCATCAGTAGCTGCTGACCCACCCAGCACTGGAAAGGAAATAGACCCTGACAGCATCCCCACGGCTATCAAGTACCAAGATGACAATTCTCTAGCTCATCCAAATGTATTTATTGAAAAAGCTGAAGCTGAGGAAAAGTGGTTCAAGAGATTGATTGCTCTCCGACAAGAAAGATTGATGGGCAGTCCTGTGGCCTAAGCAGTAGACTTACGGTCGGATTGACAGGAAGCTTGAAAACTTAGGTTTTAAATACCAACATTAACTTTTACTCTCAAAAAATAGCTTAGCCAATTACATGAAAAAAGAAAACTCATTTCTTCCCTCGTGTTCAACTAAATATTTGGTAACTTGAATCAAACATTGTGGATAGTGAATCTGTTATAAACGTGCTGAGGCATGAACATATTATACTGTTAATAAAGCAAATAATAAAAATAACAGTGTTGAAATAAATGAATATTCAGTAGTGTTTCTCATTACAATTCTTACAAAGTCATGTTTTTGACCCACTATTGTATAATTGTATATACAAGAGCCATATTGTTTAGTTCTGCTGTGTGTTGTGAAACCCTTTTTGAACCCCTTATCTCACCTTCCTTAAGGCTTTAGGTATCATAAAGTGTGCTCTGCAAAGTCTCCACAATGGCCGTGTTGGACTTGAAGGCTGGGTGTTGTGTCCCGTGTGGTCTCAGTCCTTTAGTTGTCATTATTTGGAGGCTTAGGGGGGAGGATCCCAGTTTCAGTCTGCACTGCACATGTACCGGGACTACATGGTGAGGCCTTGTCTAGAAAAATGTTAATTTAATAAAGGAATAGTTTTCGCTTAGAGATCAATTTATATTAAGTGTTCTTTTGAAACCTGTACCTAGACCCCAGTCCTTTCCAGTAGAAATCACTTGCCCAGTATATTAGTCATCATTGCGCACTGCTGTGACAGGAGTCCTGGCCTAACTTTAGGGGAAAGGCTTATTTTATTTCGGCTTATGCTTTAAGCAATTTCAGGCCATGCTCAGCTGGCTCCACTGCTTGTAGGCCTGTGGCAGGCAAAAACACAGCAAAGGCCATAGCGTGTACTCTTCAGAGACATACTCCAGCCACCTGCTTCTAGTCTGTCCCCTACCTGCTGGCAGCTCATTCAGCTCTAAGCTCATGGTTTAGTCCATTCGTGAAGTAACAGGCCTCATgctccagtaaccctctcaataacaccaccagcacagggccaggctttaaacactgagccttttgggagacacttcatacccagacattaacaCCATGCTAGACGTATGTGAAGGACCCAATACTCATGGTGGAAAAAGAATTTCTGAGAAATAAGAGCTCTGGCAGCGCTTGCTCAGGCAATGTCTGTCCCCTCCTGAGGAAGCCACTGCCATGTGTAGAATGCCGTTCTCTAGTTGGCAAGCCATGGACATCTCCATAGTCCACACCAAATGTGCTAGAGAGAAGGGCTTGGGGCCTTGCTGTATACAATGGGATTTCAACCCCTGGTACAAACACTTTTCCTCCCATTTTTCTCTGCTTACTTTTACATTGACTCTCTGAAGACTGGGGCTGAGGGCCCAGCCTTGGGAACTCTCTGGGATGTGACACACAAGCCATTTTCCAACCTTTTTACACTTTAGAGCTACTGAAGTTCTCTGTTAAGGATAAAAACCGGACGATCCTTACACTCAGTTTCAAATGCTATAAAGAAGGTCTGTTTTAAGATGCTTGTTTTCATGTATACATTTTCTTGATCTTAGCAAAGACTGTTTTCCTTGGCTCTACAAATAAACATGGCCAGTATGAAGGCAGGTCCATGTAGTCGTTAATGTAGAAAAACAGCTACACAGTAATGAATGATTTCAGGAGGGATTATTCTCAAATATTTTGCTTTTTAATTCCTTTTCTAATTTGTAAATGGTAAGTGTGTTCTTGTGCTATTAGGAAGTATATGTCTAGGAAAGGATATGAGCTATCAGTTGGCCATGGGGAGTCTCCACTCTCCTTTCATTGTACAGCAATGGAGACTGTGATCTACTTTGTAGTACACCTCCCTCCTGTGCTTCTAGTGACAGGTACAGCAACTACAGAGGCTTCCATTGTAATGAATTTGCATCTTAAAGATAAATCTTTTGTGGAAAATAAAAAAAAAGTGAAGCTTTGCTTTGTCTTCCTTTGTTTTAAGCAAGCAAATAAATCTGGTCCTAAAGAACTCA