Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

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Summary

Gene Name Cwc22
Plot displaying the genomic locations of a parental gene (in chr3) and its retrocopy(ies). Each line represents a retrocopy.
Specie Rattus norvegicus
Full Name CWC22 spliceosome associated protein
Also known as RGD1565385
Coordinate chr3:64731145-64780127
Strand -
Gene summary Predicted to enable RNA binding activity. Predicted to be involved in mRNA splicing, via spliceosome. Predicted to be located in cytosol and nuclear speck. Predicted to be part of U2-type catalytic step 1 spliceosome; U2-type catalytic step 2 spliceosome; and U2-type precatalytic spliceosome. Orthologous to human CWC22 (CWC22 spliceosome associated protein homolog). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Cwc22

Retroname Coord Strand Genomic Region ENSG
Cwc22P1 chr4:166488014-166488231 + Intergenic
 N/A UCSC
Cwc22P2 chr7:74746069-74748290 - Intergenic
 N/A UCSC
Cwc22P6 chrX:82844529-82846804 + Intergenic
 N/A UCSC
Cwc22P3 chr9:7312445-7312662 - Intergenic
 N/A UCSC
Cwc22P4 chr13:4255641-4255858 + Intergenic
 N/A UCSC
Cwc22P5 chrX:73224613-73224830 + Intergenic
 N/A UCSC

Expression

Transcript Sequences

>XM_006234425.3
ATACCTGTCAATTCACTATCAGTTTTTCACTAATTTCTCCCGCTGCCTTCACCCGGGAAAGGGAACTGATACACTTCCGGTGTGATGGCGGCGCGGTGGAGCTTTAGGTGACGTGTGGAGACAGAAAACTGACAAGGAACTCAGACCATTGAGTACGTGTCACTTAGAAAAACCTGAAGAATCTGGTTTATCGGGTCAGCCGACAGCAGAAAATGAAAAGTAGTATGGCACACATGAAATCCTCTGGTCACGACAGAAGGGAGAGCCACAATTCATACCACCGGAGGAGCTCCTCCCCAGAAGACAGATATACAGAGCAAGACCGGTCCCCCCGGGATAGAGACTATTCTGATTACAGCCGGTCAGACTATGAGCGATCCAGAAGAGGATACTCTTACGATGACAGCATGGAATCACGAAGCAGGGACCgagagaaacgcagagagagagagagagaCGCAGACCATCGGAAACGGTCCCGGAAATCCCCGTCTCCGGAAAGGAGGAGCCCAGACCGAGGAGTGAGCCAGAGTTCTACTCAGGAAGAACCGACATCGAAGAAGAAGAAGGATGAGCAGGACCCGCTGCTCACCCGCACTGGGGGAGCGTATATCCCTCCTGCAAAGCTCAGGATGATGCAGGAGCAGATCACGGATAAAAACAGCTTAGCATACCAGAGGATGAGCTGGGAGGCTCTGAAGAAATCCATCAATGGTCTCATCAACAAGGTCAACATCTCAAATATAAGCATCATTATCCAAGAGCTCCTTCAAGAGAACATCGTTAGAGGGAGAGGATTGCTGTCCAGATCTGTTCTGCAAGCACAGAGCGCTTCTCCCATTTTCACTCATGTTTATGCAGCTTTGGTGGCGATAATCAACTCAAAGTTCCCACAGATTGGAGAACTGATCCTCAAGAGACTAATTCTCAATTTTCGGAAAGGATACCGAAGGAACGATAAGCAACTTTGCCTGACTGCTTCAAAATTTGTGGCACATCTTATTAACCAAAATGTGGCACATGAGGTTCTGTGCCTGGAGATGCTCACTTTGCTGCTAGAGAGACCAACCGATGACAGTGTTGAAGTAGCTATCGGCTTCCTCAAGGAGTGTGGTCTCAAATTAACCCAGGTGTCACCAAGGGGAATCAATGCAATCTTTGAACGCCTGCGAAACATTCTGCATGAGTCCGAGATTGACAAAAGAGTCCAGTACATGATTGAAGTGATGTTTGCTGTACGGAAGGATGGATTCAAGGACCACCCTGTTATTCTGGAAGGACTTGACTTAGTGGAAGAGGATGATCAGTTTACACACATGCTCCCCTTGGAGGATGACTACAATCCAGAAGATGTTCTTAATGTTTTCAAGATGGATCCTAATTTTATGGAGAATGAAGAGAAGTACAAGGTTATTAAAAAAGAAATCCTTGATGAAGGAGACAGTGACTCAAACACAGACCAGgaagcaggaagtagtgaagatgaggaggaggacgaggaagaggaagaaggtgaagaagaggaaggagGACAGAAAGTAACTATTCATGATAAAACAGAAATCAACCTAGTCTCGTTTCGCCGTACAATATATCTTGCTATTCAGTCAAGTTTAGATTTTGAAGAATGTGCACACAAGTTGCTGAAAATGGAGTTTGCTGAGAGCCAAACAAAAGAACTCTGCAACATGATACTTGATTGCTGTGCCCAACAAAGAACCTATGAAAAATTTTTTGGCTTGTTAGCTGGGCGGTTTTGTATGCTGAAAAAAGAGTACATGGAATCATTTGAAAGTATATTCAAGGAACAGTACGACACCATCCACCGCTTAGAGACAAACAAATTGAGAAATGTTGCTAAGATGTTCGCTCACCTTTTATACACAGACTCACTTCCGTGGAGTGTTCTCGAGTGTATAAAGCTGAGTGAAGAGACGACGACATCATCCAGTAGGATTTTTGTCAAGATCTTCTTCCAGGAGCTGTGTGAATACATGGGTCTTCCTAAACTGAATGCGAGGTTAAAGGATGAAACTCTTCAGCCATTCTTTGAAGGACTGTTACCCCGAGACAACCCACGCAACACCCGGTTTGCCATCAACTTCTTCACTTCCATAGGTCTCGGAGGATTGACGGATGAACTTCGAGAACATCTGAAAAATACGCCCAAGGTCATTGTAGCCCAGAAACCAGATGCTGAGCAGAAGAAACCGGTCCTAACATCTTCATCTTCAGAGTCTTCCTCGGGGTCTGATTCCTCTGACTCAGATTCTGACAGCAGCGAGAGCAGCTCAGAGTCCTCCAGTGAAGCGAGCGACTCCTCCTCCTCCAGCAGTCAGAGCTCTGCCTCAGCTAAAGGTTCAAGAAAGAAAAGACAAGGAAAGGCCAGAGGTGAAGAAGTAGATAAGTTAGCCAGGAGCCACCAGGCACGTGACAGGCGGCGAGAAGGAGGCAGAGAGGACCAAAGGCATCAGGAAGGGAGGACTGAGAGAGCAAGGTCTGAAAGACACAGAGCTCAGCACTCACGAGATGCAGACTGGCGAGATCCCCCAGCAAAGCACATGGAGGACAGAAGTCATGAGAATAGTTACAACAGAGTTGGCAATGGCCGAGAACAAGGCTCGCACAGAGAGCCAGAAGACAGGCATGGCGAGCCAAGGAAGAAGCGGCGAGAGAGAAGAGATTCTTTTTCTGAAAATGAGAAGCAAAGAGCCCGAAATCAGGACAGTGATAATGTTAGAAGAAAAGATGGCTCCAAGTCAAGAGAGAGGAGTAGGAAGCATTCTGGTCATAAAGGAGATGATGACGACAGGTATCAGAACGGTGCCGAGAGACGCTGGGAAAAACCTAGCAGATACGCTGAACATTCTAGAGAATCGAAGAGAAGTCAGGACCGGAGGAGAGAAAAGTCTCCAACAAAACACAAATAACTCTAATGACAACTGGACTCGCCTTACATTCAGTTCAATGTCCTTTTTACATTGATGGATTTTATAGAGAACTCTGTATAAAGTACCTGTTTGTAAATTTTAAAGATTTTTTTTGACATGTTTTATAATTGATATATCTCAAGGTTCTTTGTGTAAAATCATAAAGAAAAGGGACTCAACAAAGGGGTAAATCTTATGTTTTGTGAATAAAAGGAACAAATGTTCATTGAATCATT
>XM_342453.8
ATACCTGTCAATTCACTATCAGTTTTTCACTAATTTCTCCCGCTGCCTTCACCCGGGAAAGGGAACTGATACACTTCCGGTGTGATGGCGGCGCGGTGGAGCTTTAGGTGACGTGTGGAGACAGAAAACTGACAAGGAACTCAGACCATTGAGTACGTGTCACTTAGAAAAACCTGAAGAATCTGGTTTATCGGGTCAGCCGACAGCAGAAAATGAAAAGTAGTATGGCACACATGAAACAGTCCTCTGGTCACGACAGAAGGGAGAGCCACAATTCATACCACCGGAGGAGCTCCTCCCCAGAAGACAGATATACAGAGCAAGACCGGTCCCCCCGGGATAGAGACTATTCTGATTACAGCCGGTCAGACTATGAGCGATCCAGAAGAGGATACTCTTACGATGACAGCATGGAATCACGAAGCAGGGACCgagagaaacgcagagagagagagagagaCGCAGACCATCGGAAACGGTCCCGGAAATCCCCGTCTCCGGAAAGGAGGAGCCCAGACCGAGGAGTGAGCCAGAGTTCTACTCAGGAAGAACCGACATCGAAGAAGAAGAAGGATGAGCAGGACCCGCTGCTCACCCGCACTGGGGGAGCGTATATCCCTCCTGCAAAGCTCAGGATGATGCAGGAGCAGATCACGGATAAAAACAGCTTAGCATACCAGAGGATGAGCTGGGAGGCTCTGAAGAAATCCATCAATGGTCTCATCAACAAGGTCAACATCTCAAATATAAGCATCATTATCCAAGAGCTCCTTCAAGAGAACATCGTTAGAGGGAGAGGATTGCTGTCCAGATCTGTTCTGCAAGCACAGAGCGCTTCTCCCATTTTCACTCATGTTTATGCAGCTTTGGTGGCGATAATCAACTCAAAGTTCCCACAGATTGGAGAACTGATCCTCAAGAGACTAATTCTCAATTTTCGGAAAGGATACCGAAGGAACGATAAGCAACTTTGCCTGACTGCTTCAAAATTTGTGGCACATCTTATTAACCAAAATGTGGCACATGAGGTTCTGTGCCTGGAGATGCTCACTTTGCTGCTAGAGAGACCAACCGATGACAGTGTTGAAGTAGCTATCGGCTTCCTCAAGGAGTGTGGTCTCAAATTAACCCAGGTGTCACCAAGGGGAATCAATGCAATCTTTGAACGCCTGCGAAACATTCTGCATGAGTCCGAGATTGACAAAAGAGTCCAGTACATGATTGAAGTGATGTTTGCTGTACGGAAGGATGGATTCAAGGACCACCCTGTTATTCTGGAAGGACTTGACTTAGTGGAAGAGGATGATCAGTTTACACACATGCTCCCCTTGGAGGATGACTACAATCCAGAAGATGTTCTTAATGTTTTCAAGATGGATCCTAATTTTATGGAGAATGAAGAGAAGTACAAGGTTATTAAAAAAGAAATCCTTGATGAAGGAGACAGTGACTCAAACACAGACCAGgaagcaggaagtagtgaagatgaggaggaggacgaggaagaggaagaaggtgaagaagaggaaggagGACAGAAAGTAACTATTCATGATAAAACAGAAATCAACCTAGTCTCGTTTCGCCGTACAATATATCTTGCTATTCAGTCAAGTTTAGATTTTGAAGAATGTGCACACAAGTTGCTGAAAATGGAGTTTGCTGAGAGCCAAACAAAAGAACTCTGCAACATGATACTTGATTGCTGTGCCCAACAAAGAACCTATGAAAAATTTTTTGGCTTGTTAGCTGGGCGGTTTTGTATGCTGAAAAAAGAGTACATGGAATCATTTGAAAGTATATTCAAGGAACAGTACGACACCATCCACCGCTTAGAGACAAACAAATTGAGAAATGTTGCTAAGATGTTCGCTCACCTTTTATACACAGACTCACTTCCGTGGAGTGTTCTCGAGTGTATAAAGCTGAGTGAAGAGACGACGACATCATCCAGTAGGATTTTTGTCAAGATCTTCTTCCAGGAGCTGTGTGAATACATGGGTCTTCCTAAACTGAATGCGAGGTTAAAGGATGAAACTCTTCAGCCATTCTTTGAAGGACTGTTACCCCGAGACAACCCACGCAACACCCGGTTTGCCATCAACTTCTTCACTTCCATAGGTCTCGGAGGATTGACGGATGAACTTCGAGAACATCTGAAAAATACGCCCAAGGTCATTGTAGCCCAGAAACCAGATGCTGAGCAGAAGAAACCGGTCCTAACATCTTCATCTTCAGAGTCTTCCTCGGGGTCTGATTCCTCTGACTCAGATTCTGACAGCAGCGAGAGCAGCTCAGAGTCCTCCAGTGAAGCGAGCGACTCCTCCTCCTCCAGCAGTCAGAGCTCTGCCTCAGCTAAAGGTTCAAGAAAGAAAAGACAAGGAAAGGCCAGAGGTGAAGAAGTAGATAAGTTAGCCAGGAGCCACCAGGCACGTGACAGGCGGCGAGAAGGAGGCAGAGAGGACCAAAGGCATCAGGAAGGGAGGACTGAGAGAGCAAGGTCTGAAAGACACAGAGCTCAGCACTCACGAGATGCAGACTGGCGAGATCCCCCAGCAAAGCACATGGAGGACAGAAGTCATGAGAATAGTTACAACAGAGTTGGCAATGGCCGAGAACAAGGCTCGCACAGAGAGCCAGAAGACAGGCATGGCGAGCCAAGGAAGAAGCGGCGAGAGAGAAGAGATTCTTTTTCTGAAAATGAGAAGCAAAGAGCCCGAAATCAGGACAGTGATAATGTTAGAAGAAAAGATGGCTCCAAGTCAAGAGAGAGGAGTAGGAAGCATTCTGGTCATAAAGGAGATGATGACGACAGGTATCAGAACGGTGCCGAGAGACGCTGGGAAAAACCTAGCAGATACGCTGAACATTCTAGAGAATCGAAGAGAAGTCAGGACCGGAGGAGAGAAAAGTCTCCAACAAAACACAAATAACTCTAATGACAACTGGACTCGCCTTACATTCAGTTCAATGTCCTTTTTACATTGATGGATTTTATAGAGAACTCTGTATAAAGTACCTGTTTGTAAATTTTAAAGATTTTTTTTGACATGTTTTATAATTGATATATCTCAAGGTTCTTTGTGTAAAATCATAAAGAAAAGGGACTCAACAAAGGGGTAAATCTTATGTTTTGTGAATAAAAGGAACAAATGTTCATTGAATCATT