Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name Rcn1
Plot displaying the genomic locations of a parental gene (in chr3) and its retrocopy(ies). Each line represents a retrocopy.
Specie Rattus norvegicus
Full Name reticulocalbin 1
Also known as Rcn
Coordinate chr3:95404863-95419110
Strand -
Gene summary Predicted to enable calcium ion binding activity. Predicted to act upstream of or within camera-type eye development and in utero embryonic development. Predicted to be active in endoplasmic reticulum. Orthologous to human RCN1 (reticulocalbin 1). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Rcn1

Retroname Coord Strand Genomic Region ENSG
Rcn1P1 chr4:166623003-166624143 - Intergenic
N/A UCSC
Rcn1P2 chr6:30689654-30690717 + Intergenic
N/A UCSC
Rcn1P3 chr7:1701938-1702923 + Intragenic
N/A UCSC
Rcn1P4 chr7:20373932-20375815 + Intragenic
N/A UCSC
Rcn1P5 chr7:20967139-20968360 + Intergenic
N/A UCSC
Rcn1P6 chr7:23095488-23097144 + Intragenic
N/A UCSC
Rcn1P7 chr7:252868-253947 - Intergenic
N/A UCSC
Rcn1P8 chr9:105926717-105927758 + Intergenic
N/A UCSC
Rcn1P9 chr9:12101238-12102283 + Intergenic
N/A UCSC
Rcn1P10 chr9:1423831-1426875 - Intragenic
N/A UCSC
Rcn1P11 chr9:551089-552192 + Intergenic
N/A UCSC
Rcn1P12 chr9:8390933-8391426 + Intragenic
N/A UCSC
Rcn1P13 chr11:39232327-39233471 + Intergenic
N/A UCSC
Rcn1P14 chr14:94346517-94347659 - Intragenic
N/A UCSC
Rcn1P15 chr16:39043627-39044777 - Intergenic
N/A UCSC
Rcn1P16 chr16:66244982-66245481 + Intergenic
N/A UCSC
Rcn1P17 chr16:82409-83898 - Intergenic
N/A UCSC
Rcn1P18 chrX:22775734-22776983 + Intergenic
N/A UCSC

Expression

Transcript Sequences

>NM_001108586.1
ACTGCAAATTGTGTTAACCGGGTTTAAATGCTCATCTCCGGGGTAGCCTTGGGCTGAGGTTTGGGCTTTCAGCTGGAAGCTGAGCGGGAGCGCTGCTTCTCTAACCGCGGAGAAGAGCTATCATCCAAAACATCTGTTGCATTTTCACAAAGTACTTCTTTCCGGTCTTGCAGAGAGCCCTCCAGTCCGCAGCCCCCATCATCTGGGCCCGCCCCTCGCAACGAGATCGCGGGGAGGGGCCGAGGCGAAACCGGAGCCCAGCGCCCACCACCCTGGCTGGCGACGTGGCTCCGCGGCCCCGGCCTCCCCCGGCGGCGCCGTGGCCAATGGGCGCGTGAGTGGGGCGGCCCGAGCCTCCCGGAGCCAGCCGGGCGCGCCCCTCGCTGGGGAGGGGACAGCGGCTGCGGCGCTACGAGCCCCCACTGCCCGGCAGCCTCCCTTTGCTCGCGACTAtggcgcgcggtggccgcctgggactcgccctggggctgctgctggcactggtgctggcgctgCGGGCCAAGCCCACGGTGCGCAAGGAGCGCGTGGTTCGGCCCGATTCAGAGCTGGGCGAGCGGCCGCCCGAGGACAACCAGAGCTTCCAGTACGATCATGAGGCCTTCCTAGGCAAGGAGGATTCCAAGACCTTCGATCAGCTAAGCCCGGACGAGAGCAAGGAGAGGCTGGGGAAAATTGTTGATCGAATCGACAGTGATGGAGACGGCCTTGTTACTACTGAGGAGCTGAAAGTTTGGATCAAACGGGTACAGAAAAGATACATCTACGATAATGTGGCTAAAGTCTGGAAGGATTATGATAGGGACAAAGACGAAAAGATCTCCTGGGAAGAATACAAGCAGGCCACCTATGGCTACTACCTGGGAAACCCTGCTGAATTCCAAGATAGCTCTGATCATCACACCTTTAAAAAGATGCTGCCACGGGATGAGAGGAGGTTTAAGGCTTCAGACCTCGATGGCGACCTGACAGCTACTCGGGAGGAGTTCACTGCCTTTCTGCACCCAGAGGAGTTTGAACATATGAAGGAGATTGTAGTTCTGGAAACCCTGGAGGATATCGACAAGAACGGGGATGGTTTTGTGGACCAGGATGAGTACATTGCGGACATGTTTTCTCACGAGGACAATGGCCCTGAGCCAGACTGGGTTTTGTCTGAACGGGAGCAGTTCAATGATTTCCGAGATCTGAACAAGGACGGGAAGCTGGACAAGGATGAGATTCGCCACTGGATCCTCCCTCAGGACTACGACCATGCACAGGCCGAGGCCCGGCATCTGGTGTATGAGTCAGACAAAAACAAGGATGAGATGCTAACCAAGGAGGAGATTCTAGACAACTGGAACATGTTTGTGGGAAGCCAAGCCACCAATTACGGGGAAGATCTGACCAAAAATCATGATGAACTTTGAAGGACACTCATCCTCATGTGGCCAACGGCCTCCGGCTTTCTGCGATGTTCTGGGTGATTGCTATAGGTGTCAAGTGTATAGCAGTTGTGTCCCTCAACAATGCTATTATACCTCAGATTGGGGTAGAAATTATTTTTCACTCCATATTTACTGGAAAATAACCATCACTATTTATTCCAGTAGGATTTTTCCTGAAGCACATTAAACTCTTGGCAAATTGCAGTTCTCTGAGGGGATACATTGCTACAGCATGATTTTCTAGACTCCTCCTCTACTTAATTAATTAATGGGCAAGAAATCATGAAAGGGTTCTGTAGCTCAAGGTGGGTGGGTGGGTGGGACACTGCACAGAATAATCACTATGTGTTTGAACTATTAAATTTTGGGTTTTTTTAGTTGCCACTGTTAAATGGTGGTGAAGGTAAGGCTTGGAGGAGTCAATATTGTATTTTCCTAGGTCAGCCAACCTTGGAATAGGCATGGTATTTCTAACTCTTTATATTTGGAGCTGTTATCATAAATGGTATATAAACTTTTGTGTGTTTTCCTTATGGGCCTGCTAATGTGCACAGTAAACCCACATCTTTGGGGTTTTGTTTTGCTTTGTTTTTAATACTAAGAAGCAATCAAAAAAAAAAAAGATAATGTGAACAAGAAAGAAATGTTAGGATTAGGAAAAAAGATGAATGCCAGGTATTTGAAAAACTGTATGACCATGGTCAACACTTTAATATACTTGAGAAATTTTTTTACATGTTAATGAACCGGGTCTGTTTTTTTAAAAAATAGTGAATAGAAATGCAGTCCCTTCCTGGCTGTGAGGCTAGGGATCCAGATGTAGTGGAATTTATTATTTGTTGAGTCCTGAACCTTTGAGCCTGCTTCTAGCACAGCTTATGCCAAGGAGACAGGGCAAGGTGATAGCTAAGCCATTGACCAAACTATCTGGAGGAATAATTACAGGTGCAATTCCACCTTGTAAATGGGAGGAGAAGAATAAAGGATGTCTTTGCGGATTTCCCCATGTGTCTTGTGTTTGATTTCATAGAAAGCGTGCTTTCTTTGTTCCTCTGGGATTAAACGTTCAACAGGGTCCGTGGTCTAGATCAAAATGGACTCAGTATTTACTAGCAAGTTCAGAATCTATCAGTAGCTGCTGATTTCATCCCTCTGTACTTCGTGTCCGTCTCTGCAGTTAGGGAACCCAGTGTCATTTCCACAGTAGAATCCGTCCTGAGACAAAATCCAGATCTTGGTATTGCCTGTGGGGCCTGCCGAACAGATCTGGTCCTGCTTCCCTTCTGAGAACTGCCTCTTTCTTTAGTCTTCTTTTTTCTCCCCCTTTCCCCACCCTTTTACCCCATCCTCCACCCTCACTGATTTTGTTGCTTAGATGAACTCCCTGGGTGAGAAATGAACAAAGCCCTAAACAGCGCCAGCCAGCGTAGTTCAGGCTGGGGAAGTAGAGAGCTTCCTGAGCTTGTGTATAGAGCGTGAGTGACGGTATACTGACAAGAACATGGTTGATCCATCCCAAAGCAGCCATGCAACAAAGTCTTTACCCAGCGTGGACTGTGTGGCTTCCTCACATCCAGAGACCAAGCCCCAAGGCCACACACtgtattgcctggttctgtgtgtca