Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

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Summary

Gene Name Rtcb
Plot displaying the genomic locations of a parental gene (in chr7) and its retrocopy(ies). Each line represents a retrocopy.
Specie Rattus norvegicus
Full Name RNA 2',3'-cyclic phosphate and 5'-OH ligase
Also known as -
Coordinate chr7:23913830-23933191
Strand +
Gene summary Predicted to enable RNA ligase (ATP) activity and vinculin binding activity. Predicted to be involved in tRNA exon ligation utilizing 2',3' cyclic phosphate of 5'-exon as source of linkage phosphate. Predicted to act upstream of or within in utero embryonic development and placenta development. Predicted to be located in cytosol; endoplasmic reticulum membrane; and nucleus. Predicted to be part of tRNA-splicing ligase complex. Predicted to be active in nucleus. Orthologous to human RTCB (RNA 2',3'-cyclic phosphate and 5'-OH ligase). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Rtcb

Retroname Coord Strand Genomic Region ENSG
RtcbP1 chr7:60070299-60072070 + Intergenic
 N/A UCSC

Expression

Transcript Sequences

>NM_207614.1
ATGAGTCGTAACTACAACGATGAGCTACAGTTCTTGGACAAGATCAATAAGAACTGCTGGAGGATCAAGAAGGGCTTTGTGCCCAACATGCAGGTTGAAGGGGTGTTTTATGTGAATGACGCTCTGGAAAAGCTCATGTTTGAGGAGTTACGGAATGCCTGTCGAGGTGGTGGTGTTGGTGGCTTCCTGCCAGCCATGAAGCAGATTGGCAATGTGGCAGCCCTGCCTGGAATAGTTCATCGGTCTATTGGGCTTCCTGATGTCCACTCAGGCTACGGGTTTGCCATAGGGAACATGGCTGCCTTTGATATGAATGACCCTGAGGCAGTTGTATCCCCAGGTGGTGTCGGATTTGATATTAACTGTGGTGTCCGCTTGCTAAGAACCAATTTAGATGAGAGCGATGTACAGCCTGTGAAGGAACAACTTGCCCAAGCTATGTTTGACCACATCCCTGTCGGGGTGGGATCGAAAGGTGTCATTCCAATGAATGCCAAAGACTTGGAGGAGGCATTGGAGATGGGTGTGGACTGGTCCCTGAGAGAAGGCTATGCCTGGGCTGAGGACAAGGAGCACTGTGAGGAGTATGGAAGGATGCTCCAAGCCGACCCCAATAAGGTCTCACCCAGGGCAAAGAAAAGGGGCCTTCCTCAGTTGGGGACCCTGGGAGCAGGCAACCATTATGCAGAGATCCAGGTTGTAGATGAGATTTTCAACGAGTATGCTGCCAAGAAGATGGGCATCGACCATAAGGGACAGGTGTGCGTGATGATCCACAGCGGGAGCAGAGGCTTGGGCCATCAAGTAGCTACAGACGCACTGGTAGCTATGGAGAAAGCCATGAAGAGAGACAAGATTATAGTCAATGACCGGCAGCTGGCGTGTGCTCGGATTGCATCCCCAGAGGGACAAGACTATCTAAAGGGAATGGCTGCCGCTGGAAACTATGCCTGGGTTAACCGCTCGTCTATGACCTTCTTAACCCGTCAGGCTTTTGCCAAAGTCTTCAACACAACCCCTGACGACCTGGACCTGCATGTGATTTATGATGTTTCTCACAACATCGCCAAAGTGGAGCAGCACGTGGTAGACGGAAAGGAGCGGACGCTGTTGGTGCACAGGAAAGGGTCCACCCGAGCTTTCCCTCCTCACCATCCCCTCATTGCTGTTGATTACCAGCTCACTGGACAACCAGTGCTTATCGGTGGCACCATGGGGACCTGTAGTTATGTTCTGACTGGCACTGAACAAGGCATGACTGAGACCTTTGGAACAACCTGTCATGGAGCGGGCCGTGCTTTGTCCAGAGCAAAATCACGTCGTAATTTAGATTTCCAAGATGTCTTAGACAAGCTGGCAGACATGGGAATCGCCATCCGGGTTGCGTCCCCCAAGCTGGTTATGGAAGAGGCTCCAGAATCATATAAGAATGTGACAGACGTCGTGAACACTTGCCATGATGCTGGGATCAGCAAGAAGGCCATTAAACTGAGACCAATTGCTGTTATTAAAGGATAGATCCAAGACTGTCAGCATCTCTGAGGTGCCCATGGACTGAGATCCCTAAGACACCCACTCGAGGCCTGACAAGATCCGAATGGCAGAGCTGTCGCTATGCACACCACAATGGCTGGTGGAGAGGCTGCTGTCACACACAGGTTGGAAGATAGCCTTCCAGAAGACATGTATCTCTGTTGGGAACAGTCAAGTGAGCCTGTCCCACGGGGTTCTGTGACTCTTGGGGTGTGGGAAGGGATCAAGAAATGCCCTACTTGGTCATACAAGTCTGTAATCAGCAGAGTGGACTTCTTTACACCAAGCTCTGTAGCCCAGTAGGTATCATGAAAACATTCTATTAAATAGGTTTTTGAATGTT