Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

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Summary

Gene Name Ctdsp1
Plot displaying the genomic locations of a parental gene (in chr9) and its retrocopy(ies). Each line represents a retrocopy.
Specie Rattus norvegicus
Full Name CTD small phosphatase 1
Also known as -
Coordinate chr9:81672613-81677979
Strand +
Gene summary Predicted to enable RNA polymerase II CTD heptapeptide repeat phosphatase activity. Predicted to be involved in protein dephosphorylation and regulation of transcription by RNA polymerase II. Predicted to act upstream of or within negative regulation of G1/S transition of mitotic cell cycle; negative regulation of cell differentiation; and negative regulation of protein phosphorylation. Predicted to be located in nucleoplasm. Orthologous to human CTDSP1 (CTD small phosphatase 1). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Ctdsp1

Retroname Coord Strand Genomic Region ENSG
Ctdsp1P1 chr2:205698920-205699886 + Intergenic
 N/A UCSC
Ctdsp1P2 chr11:80533644-80534581 - Intergenic
 N/A UCSC

Expression

Transcript Sequences

>NM_001128079.1
CGCGGGGATCCCTCCCTCCCAACCTTCCCTCCCCCCCGCGCCCCGATTccggcccgagccgggggggaggccgggcgccggggccagagtccggccggagcggagcgcgccgggccCCATGGACAGCTCGGCCGTCATTACTCAGATCAGCAAGGAGGAGGCGCGGGGCCCGCTGCGGGGCAAAGGTGACCAGAAGTCAGCAGTTTCCCAGAAGCCCCGGAGTCGGGGCATCCTCCACTCTCTCTTCTGCTGTGTCTGCCGAGATGATGGGGAGCCCCTGCCTGCCCACAGTGGGGCTCCCCTGCTGGTGGAGGAAAATGGCGCCATCCCTAAGCATACCCCAGTCCAGTACCTGCTTCCCGAGGTCAAGGCCCAGGACTCAGACAAGATCTGCGTTGTCATCGACCTGGACGAGACCCTGGTGCACAGCTCCTTCAAGCCAGTGAACAACGCTGACTTCATCATCCCGGTGGAGATTGATGGAGTGGTTCACCAGGTCTATGTACTGAAACGGCCCCACGTAGATGAGTTCCTACAGCGAATGGGCGAGCTCTTTGAGTGTGTGTTGTTCACTGCCAGTCTTGCCAAGTACGCAGACCCTGTAGCTGATCTGCTGGACAAGTGGGGAGCCTTCCGTGCCAGGCTGTTTCGAGAGTCCTGTGTCTTCCATCGGGGAAACTACGTAAAGGACCTGAGCAGGCTGGGCCGAGACCTGCGGCGGGTGCTAATCTTAGACAACTCACCCGCCTCATACGTCTTCCATCCAGACAATGCCGTTCCAGTGGCCTCGTGGTTTGACAACATGAGTGACACTGAGTTACACGATCTCTTACCCTTCTTTGAGCAACTCAGCCGCGTCGACGACGTATACTCAGTGCTCAGACAGCCTAGGCCCGGGAGCTAGTGAGGTGTCTTGGGGCCAGGACCTGCCCCTCGGCAAGGCCCACCACACCTCTTGCCAGCAGACTGTGCTGTTAACAAAACCCGAGGGCTATGTCATGTTCATGGCCCTGGGGAAGAGGTGTCTCCCCTGTCATGTTGCATGGAGGACAGTGAGCCCTTGGGTCCCTATGTCAGTGCCTTCAAATTTCTTCCCCTCTTCTCAGGGGACCTGGGGGGCCTGGCCTGCTGCTCCCCACTTCTGTCTTCTCTTCTCCACACCGCCAGGTTTCTCTGCTGCCAAATTGGGCCTCTTAGCCCCAGTTCTGCTTTGGGGGGGGGAGGGATAGGGTTTTTGCTGCCCCTTCCCTGTCTGGGAACAGTGGACACCCAAGTGCCTTGTATAGAACCCTCTTTACTGGTCAGCTTTTCCCAGATCTAGGCTGACCTGAGAGGAACCAATtcctccccttcctctcctccctctTGGGTTGATGGTGCCCCGCCAGTGTCTACATGGGAGGGAGAAGAAGAAAGTCTATTACAGTACACTTGTACAAGAGCTGGGGACCTTCATCAGGGAGGAATGCTCCCGGTCCAGCTTCTCCAAGGCTGCTCCATATATCCCTTAAGCCCCGTCTCCCCAAAGCCCTGGGGCTTGGCAGGACGCCCCCACGGTGCCATATAAATATGTATATGTGTATATAGATTTTTAAGGGAAGGAGAGAGGAAAGGGTGGGAACATTCTTCCCTTGACCCTTCCCTGGGCCCAGAAATTGGGGGAGGGAGGGAAAGGATTTTTACATTTTTAAAATGACTATTTTCTGAATGGAACAAGCTGGGCTAAGGGGTCAGGCCCGGTCTTCTGTCTGCTCCCAACCCTTTTACtttattcattcaaaaaacatttattgagtaccttcggtgcccagcagtgagctagTCCCACCGGCTTAGTGGGAGGAGGGTCTCTGCTTCATCATTGGTGCCTCATCCCTAAACCCCACACTTCACGTGCCTTTAGAGGATCGACAGGAGGTGGAACCTTTTTGTGGGCCTCAGGAGGTCTCCAAACTTTACCAAGCTGGCTCCTCCTGTCCCAACTCATCCTCCTTCCCTGTACTCCGTGCAGCCTCCTCCATGGCCCCCTGCTGGCTGGGGGCAGCTCCCAGGTCTCTGCCAACTCTGACTTCTCTGTTTTTAAAGCCCCTCCCCATACCTGCTGAGTCTGGAGTTCAAGCCCTTAGGCTCTCTCCCCAGATTATGAGGGTTAAGTGGACCCACAAACAAGTGCCAAGGGAGTTGGTGAAGGGAGAGGATATGGTTGGCCGGGATTAGATGACCTTCCTAATTAAGTGCCTTCTCTGTGACCGAGCACCTCCGTGTGATAAGAACTAAAGAGAAAGCTAGACCCCCTAC