Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name Snx12
Plot displaying the genomic locations of a parental gene (in chrX) and its retrocopy(ies). Each line represents a retrocopy.
Specie Rattus norvegicus
Full Name sorting nexin 12
Also known as RGD1565585
Coordinate chrX:70989822-71127330
Strand -
Gene summary Predicted to enable enzyme binding activity and phosphatidylinositol-3-phosphate binding activity. Predicted to be involved in several processes, including endosomal transport; negative regulation of protein metabolic process; and regulation of vesicle-mediated transport. Predicted to be located in early endosome. Predicted to be part of retromer complex. Predicted to be active in early endosome membrane. Orthologous to human SNX12 (sorting nexin 12). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Snx12

Retroname Coord Strand Genomic Region ENSG
Snx12P1 chr1:169186863-169187397 + Intergenic
N/A UCSC

Expression

Transcript Sequences

>NM_001108817.2
GCGCGCTCTTGCCTCAGGCCTCTGTCCCCCACCCCCTTCGCCGGTACCGGTCTCTTCTTCGGAAAGATGTCAGACACGGCAGTGGCTGACACTCGGCGCCTTAACTCGAAGCCCCAGGACCTGACCGACGCTTACGGGCCGCCTAGTAACTTCCTGGAGATAGACATCTTTAATCCACAGACGGTGGGCGTGGGCCGCGCGCGCTTCACCACCTATGAGGTTCGCATGCGGACAAACCTCCCCATCTTCAAACTGAAAGAATCCTGTGTACGGCGACGCTATAGTGACTTTGAGTGGCTGAAAAATGAGCTGGAGCGAGATAGTAAGATCGTAGTACCACCACTGCCTGGGAAAGCCTTGAAGCGGCAGCTCCCTTTCCGAGGAGATGAAGGGATCTTTGAGGAATCTTTCATTGAAGAAAGGAGGCAAGGCCTCGAACAGTTTATTAACAAAATTGCTGGGCACCCGTTGGCTCAGAATGAACGCTGTCTACACATGTTCCTGCAAGAGGAGGCAATTGATAGGAACTACGTCCCTGGGAAGGTCCTCGGGTTACACTGGCTGCTCTCCATGAGGTAAACTTGCAGAGTCTATAATTAAATAGAC