Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

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Summary

Gene Name Cluap1
Plot displaying the genomic locations of a parental gene (in chr10) and its retrocopy(ies). Each line represents a retrocopy.
Specie Rattus norvegicus
Full Name clusterin associated protein 1
Also known as -
Coordinate chr10:11847058-11878792
Strand -
Gene summary Predicted to be involved in cilium assembly. Predicted to act upstream of or within several processes, including axoneme assembly; embryonic morphogenesis; and left/right pattern formation. Predicted to be located in ciliary base; ciliary tip; and nucleoplasm. Predicted to be part of intraciliary transport particle A and intraciliary transport particle B. Predicted to be active in centrosome and cilium. Orthologous to human CLUAP1 (clusterin associated protein 1). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Cluap1

Retroname Coord Strand Genomic Region ENSG
Cluap1P1 chr11:50450329-50451365 - Intergenic
 N/A UCSC
Cluap1P2 chr14:74058496-74060000 - Intergenic
 N/A UCSC

Expression

Transcript Sequences

>XM_006245832.3
ATTCTCGAATTCTGCCCAGGGTAGGGTATCTTCGTTCCTGTCATTCTGTGCATACTTTATGCGGCTTCGACTCCGGAGTTTAGCTACGCTTTTACAAATACAAAGGAGACTCAGTCACAAAAGGTGATAGTGCTCTCTATATATTAGTGAGTCAATGAGAGTTACAACCGGACCGGAGCCAAAAGTGCTCAACGAATGGCTATGACACTGCGCAGCTTGTGAGGTGCGAACGCCACCTGCTGGTCTGTGTCTTGCGCTTGCGCGCACCTCACCGCTTCGCTTCCTGTCTTGTTTGGCCTGGACCGCACGCTGTCCAGGGCCTCTGAGTGTTGCTATAGAGACCGGCGAGAGCTAGGCCTGAGAACTCTAAAGAGACGAGCAGCGACGCCTCAGTGGACTCTTGGGGACCACAGCGCCATGTCTTTCCGCGACCTCCGCAATTTCACAGAGATGATGAGAGCCTTGGGGTACCCACGCCACATTTCTATGGAGAATTTCCGCACACCCAACTTTGGGCTTGTCTCTGAAGTGCTTCTGTGGCTTGTGAAAAGATATGAGCCGCAGACTGACATCCCTTCTGACACTGAGACTGAACAAGACCGAGTTTTCTTCATTAAGGCAATTGCCCAGTTCATGGCCACAAAGGCACATATAAAACTCAACACCAAGAAACTCTATCAAGCAGACGGGTATGCAGTGAAGGAGCTGCTGAAGATCACATCCGTTCTTTATAACGCCATGAAGACCAAAGGCATGGAGGGCTCCAACGTCGGAGAGGAAGACATCAGCAAATTCAAGTTTGATCTGGGCTCCAAGATTGCAGATTTGAAAGCAGCCAGACAACTTGCTTCTGAAATCACTGCTAAAGGAGCTTCTCTGTATGACTTGCTGGGCAAAGAGGTTGAGCTGAGGGAACTGAGAACGGAAGCCATTGCTCGACCTCTAGAAATAAACGAGACTGAAAAGGTGATGAGAATTGCAATCAAAGATATTTTGGCACAGGTTCAGAAGACTAAAGACCTGCTCAACAATGTGGCGTCTGACGAAGCCAATTTAGAAGCCAAAATTGAAAAGAGAAAATTGGAGCTGGAAAGAAATCGGAAGCGATTGCAGACCCTGCAGAGTGTCAGGCCAGCCTTTATGGATGAGTATGAGAAGGTTGAGGAAGAGCTGCAAAAGCAGTATGACGTCTACCTGGAGAAGTTCCGGAACCTGGCTTACCTGGAGCAGCAGCTTGAGGACCATCACAGGATGGAGCAGGAACGGTTTGAAGAAGCTGAGAATACTCTGCGTCTGATGCAGAATAAGCTGAAGGAAGAGGAGAAGAGACTGCTCAAGAGTGGAAGCAATGACGACTCGGACATAGACATCCAAGAGGACGATGAATCGGACAGCGAGCTGGAGGACAGACGGCTGTCTAAGCCTCGGACAGCCATGGAGGTGCTCATGCAAGGAAGGCCCAGCAAACGCATCGTGGGCACAATGCAAGGCGGAGACTCCGATGAAGATGAAGACTCGGAGGACAGCGAAatgaacatggaagatgatgaagaagatgacgatgatttggaagatgaGAGCATTGCGCTCTCACCAGCTAAACCCAGTCGGAGGGTCCGGAAACCCGAGCCCTTGGACGAGAGTGACAATGACTTCTGACCTTCTTGCCAAGAGACCCAGACAGCTTAAGAGCGTCAGATGTATAGGTAAACAGGGACTCAGCAGGCTGGAAAGGTAACGTGTTTTGTTCACTACCCCATCTGAGCTTATCCATACTGAAACTCCAACAGAGATTTTCTTTGTCTGTCTCCTAACGCTTGGGATCCCCATACCCGTGTTCCAAGTGATTCAATCTGTAAGAAAAGCCCCTGAGGAGAAATACAGACTTGACACCATGTAAGTCTTGGCTGCTGTTATTATTAAATTAGTTTTCCTTGA
>XM_008767515.2
ATTCTCGAATTCTGCCCAGGGTAGGGTATCTTCGTTCCTGTCATTCTGTGCATACTTTATGCGGCTTCGACTCCGGAGTTTAGCTACGCTTTTACAAATACAAAGGAGACTCAGTCACAAAAGGTGATAGTGCTCTCTATATATTAGTGAGTCAATGAGAGTTACAACCGGACCGGAGCCAAAAGTGCTCAACGAATGGCTATGACACTGCGCAGCTTGTGAGGTGCGAACGCCACCTGCTGGTCTGTGTCTTGCGCTTGCGCGCACCTCACCGCTTCGCTTCCTGTCTTGTTTGGCCTGGACCGCACGCTGTCCAGGGCCTCTGAGTGTTGCTATAGAGACCGGCGAGAGCTAGGCCTGAGAACTCTAAAGAGACGAGCAGCGACGCCTCAGTGGACTCTTGGGGACCACAGCGCCATGTCTTTCCGCGACCTCCGCAATTTCACAGAGATGATGAGAGCCTTGGGGTACCCACGCCACATTTCTATGGAGAATTTCCGCACACCCAACTTTGGGCTTGTCTCTGAAGTGCTTCTGTGGCTTGTGAAAAGATATGAGCCGCAGACTGACATCCCTTCTGACACTGAGACTGAACAAGACCGAGTTTTCTTCATTAAGGCAATTGCCCAGTTCATGGCCACAAAGGCACATATAAAACTCAACACCAAGAAACTCTATCAAGCAGACGGGTATGCAGTGAAGGAGCTGCTGAAGATCACATCCGTTCTTTATAACGCCATGAAGACCAAAGGCATGGAGGGCTCCAACGTCGGAGAGGAAGACATCAGCAAATTCAAGTTTGATCTGGGCTCCAAGGAACTGAGAACGGAAGCCATTGCTCGACCTCTAGAAATAAACGAGACTGAAAAGGTGATGAGAATTGCAATCAAAGATATTTTGGCACAGGTTCAGAAGACTAAAGACCTGCTCAACAATGTGGCGTCTGACGAAGCCAATTTAGAAGCCAAAATTGAAAAGAGAAAATTGGAGCTGGAAAGAAATCGGAAGCGATTGCAGACCCTGCAGAGTGTCAGGCCAGCCTTTATGGATGAGTATGAGAAGGTTGAGGAAGAGCTGCAAAAGCAGTATGACGTCTACCTGGAGAAGTTCCGGAACCTGGCTTACCTGGAGCAGCAGCTTGAGGACCATCACAGGATGGAGCAGGAACGGTTTGAAGAAGCTGAGAATACTCTGCGTCTGATGCAGAATAAGCTGAAGGAAGAGGAGAAGAGACTGCTCAAGAGTGGAAGCAATGACGACTCGGACATAGACATCCAAGAGGACGATGAATCGGACAGCGAGCTGGAGGACAGACGGCTGTCTAAGCCTCGGACAGCCATGGAGGTGCTCATGCAAGGAAGGCCCAGCAAACGCATCGTGGGCACAATGCAAGGCGGAGACTCCGATGAAGATGAAGACTCGGAGGACAGCGAAatgaacatggaagatgatgaagaagatgacgatgatttggaagatgaGAGCATTGCGCTCTCACCAGCTAAACCCAGTCGGAGGGTCCGGAAACCCGAGCCCTTGGACGAGAGTGACAATGACTTCTGACCTTCTTGCCAAGAGACCCAGACAGCTTAAGAGCGTCAGATGTATAGGTAAACAGGGACTCAGCAGGCTGGAAAGGTAACGTGTTTTGTTCACTACCCCATCTGAGCTTATCCATACTGAAACTCCAACAGAGATTTTCTTTGTCTGTCTCCTAACGCTTGGGATCCCCATACCCGTGTTCCAAGTGATTCAATCTGTAAGAAAAGCCCCTGAGGAGAAATACAGACTTGACACCATGTAAGTCTTGGCTGCTGTTATTATTAAATTAGTTTTCCTTGA