Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name Dcaf8
Plot displaying the genomic locations of a parental gene (in chr13) and its retrocopy(ies). Each line represents a retrocopy.
Specie Rattus norvegicus
Full Name DDB1 and CUL4 associated factor 8
Also known as RGD1308513|Wdr42a
Coordinate chr13:90532153-90587542
Strand +
Gene summary Predicted to be involved in protein ubiquitination. Predicted to be located in cytosol; mitochondrion; and nucleoplasm. Predicted to be part of Cul4-RING E3 ubiquitin ligase complex. Predicted to be active in cytoplasm. Human ortholog(s) of this gene implicated in giant axonal neuropathy 2. Orthologous to human DCAF8 (DDB1 and CUL4 associated factor 8). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Dcaf8

Retroname Coord Strand Genomic Region ENSG
Dcaf8P1 chr1:155889334-155891812 + Intragenic
Intragenic
N/A UCSC
Dcaf8P2 chr1:157350464-157352942 + Intergenic
N/A UCSC
Dcaf8P3 chr2:75135892-75136922 + Intergenic
N/A UCSC

Expression

Transcript Sequences

>NM_001014231.1
gtggacggggcggcTGGGCCTGGAACAGTTGGAGCATCCGCTGGCAGAAGGATGACCCTAGATGGGAAGCGGGCTGCCGGGCCTCGCCAGCTCCCGTGCTTGTAACTGCCCCAGCCGGACGCCCTCCCCTTGACCTACCGGTTCTTCAGCGAACCTTCAGACCAGTTTTCTCAGGATCGTGGGCCAGACTTCGGTCGGCGATAAAAACAGCAAGGCTGGCTACCATATTCAAGATGTCCAGTAAAAGGCCCAGCACAGATGGGAGAAGAGACTTGGCTAACGGAAGCCTGTCTAGCAGTCCAGAAGAAATGTCTGGAGCTGAAGAAGGGAGGGAAACATCTTCGGGGATTGAAGTAGAGGCCTCAGACCTGAGTTTGAGCTTGACTGGGGACGATGGTGGCCCCAACCGCACCAGCACAGAAAGTCGTGGCACAGACACAGAGAGCTCAGGTGAAGAAAAGGACTCTGACAGCATGGAGGACACAGGCCATTATTCCATCAACGATGAAAACCGAGTTCACGGCCACTCAGATGAAGAGGAGGAGGAGGAGCAACCTCGGCACCGAGTCCAGCGCAAACGGGCCAGCCGTGACCAGGACTCATCAGATGATGAGCGAGCCCTGGAAGACTGGGTATCTTCAGAGACAACAGCTTTACCCCGGCCTCGCTGGCAAGCCCTTCCTGCCCTTCGGGAGCGGGAATTGGGTTCAAGTGCCCGCTTTGTGTATGAGGCTTGTGGAGCAAGAGTCTTTGTACAGCGTTTCCGCCTGCAGCATGGGCTTGAGGGCCATACAGGTTGTGTCAATACTTTGCACTTTAACCAGCGTGGCACCTGGCTGGCCAGTGGCAGTGATGACCTGAAGGTGGTAGTGTGGGATTGGGTGCGGCGGCAGCCCGTACTGGACTTTGAGAGTGGCCACAAAAGTAATGTCTTCCAGGCCAAGTTCCTTCCTAACAGTGGTGACTCCACCCTGGCTATGTGTGCCCGGGATGGGCAGGTCCGAGTCGCAGAACTGTCTGCTACACAGTGCTGCAAGAACACCAAGCGTGTGGCCCAGCACAAGGGAGCATCCCACAAGTTGGCCCTAGAACCAGACTCTCCCTGCACGTTCCTGTCGGCTGGTGAAGATGCCGTTGTCTTCACCATCGACCTAAGACAAGACCGGCCAGCTTCGAAACTGGTGGTGACAAAGGAGAAGGAGAAGAAAGTGGGGCTGTATACAATCTACGTGAACCCTGCCAATACCCACCAGTTTGCAGTGGGTGGACGCGATCAGTTTGTTAGGATTTATGACCAGAGGAAAATTGATGAGAATGAGAACAATGGTGTCCTGAAAAAATTCTGTCCTCACCACTTGGTGAACAGTGAGTCCAAAGCAAACATCACCTGTCTTGTGTACAGCCACGACGGCACAGAGCTCCTGGCCAGTTACAATGATGAAGACATTTACCTTTTCAACTCTTCTCACAGTGATGGGGCCCAGTATATTAAGAGATATAAAGGTCATAGAAATAATGCTACAGTAAAAGGCGTCAATTTCTATGGCCCCAAGAGTGAGTTTGTGGTGAGCGGTAGTGACTGTGGTCACATCTTCCTCTGGGAGAAGTCATCTTGCCAGATCATTCAGTTCATGGAAGGGGACAAGGGAGGTGTGGTAAACTGTCTTGAGCCCCATCCTCACCTACCTGTTTTGGCAACCAGTGGCCTAGACCATGATGTGAAGATCTGGGCACCAACAGCAGAAGCCTCCACTGAGCTAACAGGGTTAAAGGATGTGATCAAGAAGAACAAGCGAGAGCGGGATGAGGACAGCTTGCATCACACTGACCTGTTTGATAGTCACATGCTGTGGTTCCTTATGCACCACCTGAGACAGAGACGCCATCATCGGCGCTGGCGAGAACCTGGGGTTGGGGCCACAGATGCGGACTCTGATGAGTCTCCCAGCTCCTCAGACACATCGGACGAGGAGGAGGGCCCTGACCGGGTGCAGTGCATGCCATCCTGAGGCCCCAAACTTGGGAGGGATGGGCCGGGGCTGCTGACCCGCTCCTGCCTGGGCAGCTCTTTTTCAGCCCCAGGCCCTTACATTCAACAGAAATGCACTTTGGACTTTTTGTTTAAATAAAAGAAAGCTATCTGAGGAGGACAGAGCACGGGAGGTTGAGCCAGCAGAGAACCCCTAGAAGTGAGAGATGAGACCGAGCCCTGAATGAGGTTCCATGGAAGGTGCGAAGGACTCAGAGAAGTGGGCCTTTCCCTGAAGCCTTTCGTCAACTGGCTTCTTTTTCTTCTTTTTCTTTAACCTCCCTTGTTTCTTTTGGAGGGTGGGGGGTGTAGTACCAACGGGCCAGAGAGAAGGGTAGGAAGGCCGCTCTCTTTGGTTTAGGGTTTTCACCTTTTTTTCCCTTTGTTTTTTAAGAAGTCTGACAGTTGCATTAGGGGGGtttttgtttgttttctttttttgtttttttttttttttgtttttttttGGGGGGGGGTTGCCCCTGAGCAAGCACATCCCAGGATCCTGTTTTTCTGGGAAATCCTTAAGAGCCCCCAGCCATCCCAGCACCCCCTCTCTCTCCCTCCCACAACACTTAATTCTCTGTCCTTACCACAGTACTTTGCTCTCTCTTCATCCGTCACCCTCTAAATGGGGTCTGGGATGGAGACTGGAGATGTGGGAGGGTCAAGAGGTGGAAGAACAGGAAAAGTTACCTCTTGGTTTTGTTTTTAACTGTTCAGTGGCAGCAATTTCCCTGTCCCTATCACTGTTAGAGGCCTAATTTTATATCTATAAATATATTAAAAAGCAAGTTAAACTTGGATGTATCAAGTTAAAATTATTGTCAGAAGTTTAAATACCTATATATTCTCTATGAACACAATGCAATAAAGGGGCTGGAAGACGAA