Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

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Summary

Gene Name Scoc
Plot displaying the genomic locations of a parental gene (in chr19) and its retrocopy(ies). Each line represents a retrocopy.
Specie Rattus norvegicus
Full Name short coiled-coil protein
Also known as -
Coordinate chr19:24584435-24614167
Strand -
Gene summary Predicted to be involved in positive regulation of macroautophagy and regulation of protein complex stability. Predicted to be located in Golgi apparatus and nucleoplasm. Predicted to colocalize with endosome and trans-Golgi network. Orthologous to human SCOC (short coiled-coil protein). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Scoc

Retroname Coord Strand Genomic Region ENSG
ScocP1 chrX:155016353-155017225 - Intergenic
 N/A UCSC

Expression

Transcript Sequences

>XM_006255293.2
CGCACGCTCCGTGGGCGGGAAGGGCGGGGCTGATGCTGTCAGTTGGTCGGAGAGCCGCGGCCTGAGGCGTCCTACCTATCCCGCCTTTTCCCGGCGCCTCAAACGCAAGACCATTCATTAAAGAGTTTGCATTCGGGAGCTGAACGTCTGTTCCCCAAGATGATGAATGCTGACATGGACGCAGTTGATGCTGAAAATCAAGTGGAACTGGAAGAAAAGACTCGACTCATTAATCAGGTGTTGGAGCTCCAGCACACACTTGAAGATCTTTCTGCAAGAGTAGATGCAGTTAAGGAAGAAAATCTGAAGCTAAAATCGGAAAATCAAGTTCTTGGACAATATATAGAAAACCTCATGTCTGCTTCTAGTGTTTTTCAAACAACTGATACAAAAAGCAAAAGGAAGTAAAGGGTTCCCCTCCCTCTCTTCTGTGGATTGCTGCTTTTTTCCTTCCCCTTAAGGCTTGGATATGACCCAAAAGTTAGAGTACCTTTGTTTGCTTCCCTGAGTATTTATAAAGAGAATGTCAGATCTCGGTAATACTGATGCCTAACAGAAGAGGTAGCGTCCTGTGTATACGGTAGTCTATGAGTGTGCACTTGTAGAGACTTTATATTACAATTACAGATATTTATGAAACTTGAAGATGAATGTTTTGCCAATTTGCTTATATATATAGGTTTAGCACTGTCTTATCATATGCTTAATTAGTAAAATATACAAGAAAATAACCATGTTGTGAAAAAGTGACCAAAACCATGTACTGAATGCACAGCTTCTGTACCTTGTGCACCATCTTGTGcctctcctcctccgtctgcctcctccttcccatctccctccCTGACAGTAACTTCGTCTCCTACAAGAGTAACCTGAACTGTAATCATTGACACTTAACCAATGAGACACTTTCTTATCTATGGCTTGCCATTTGTGATATTTAGTAATAAGATAGGATTGCTGGTTTCTATTTAATCAATTGAAAATAGATTGAAGTTATAAAAAATTAAGGGTTTTCTTTGAAATGTAAACTGTTACATTGAGAAGGTAAAAACTCCCTACTGCAAAAAATAGTCCATTTGGTGTTGAAAAGATAGGAATGCTGGTGTGTGAGGAAAGATAGAAATAGGAAGGAAAACTGGATAAACAGAAATAACTAACTCCCAATGTTTTCCCTCCAGATGTGTGTTACCTCTGACCCACAGCTGCACTTTTGGGACATATATGAAAGTGGACTGAGTCTAATGTAAGTGGATTAAGAGAGACCAGTTAAGAGTTTGGTCTCAAGGTTTGTTTGTACCCAGGAGATGAACTTTTGCAAAATTAATTGAGAGTATATTAGTATAAGAATCATGAATATAAGAGAGTTTTGTATATGTGATAATTATTAACCTTAGTATTTTATCTCAGTTGTTTTCTCAGAATTTCTGTAAACTCAACTACTTAGTTTGCAGAATTTTAGTCATTCTTTTAACAAAGTTTAAAAATTGAGTTTGTAGCTTCCATTTGATAAGGAGCTGCTATCAGAAATCATAGTAAGGTCTATAACAGGAAAGACCCACTAATGCAGCTTGACTTGGATCATCTCCTGTATTAGTGTGAGCCTTGAGTGACTTAGCTATATGGACGTGTAATCCTTACATTGCAGACATTTTGCAACCCTTTTGTGACCTTGTTATAACTATTTAAAATTGTGTTCAAGTTCTGCTTTGCTGTTTAATAAAAAGCTGTTTCAGAG