Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

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Summary

Gene Name CalpA
Plot displaying the genomic locations of a parental gene (in chr2R) and its retrocopy(ies). Each line represents a retrocopy.
Specie Drosophila melanogaster
Full Name Calpain-A
Also known as CG18152|CG7563|DmelCG7563|EST C|calpA
Coordinate chr2R:19425113-19430564
Strand +
Gene summary Enables calcium-dependent cysteine-type endopeptidase activity. Involved in several processes, including myoblast fusion; neuron remodeling; and protein autoprocessing. Located in actin cytoskeleton and neuronal cell body. Is expressed in several structures, including blastoderm embryo; ectoderm; ectoderm anlage; extended germ band embryo; and gut section. Human ortholog(s) of this gene implicated in autosomal dominant limb-girdle muscular dystrophy; autosomal recessive limb-girdle muscular dystrophy type 2A; muscular dystrophy; and stomach cancer. Orthologous to several human genes including CAPN9 (calpain 9). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from CalpA

Retroname Coord Strand Genomic Region ENSG
CalpAP1 chr3L:9890971-9891261 + Intragenic
 N/A UCSC

Expression

Transcript Sequences

>NM_057700.4
ATTTGTAGTGAGTAAATATCTCCGTGCGGTGAAGGTGCGTGGTTCCGTTACTTTATTGTTGTGCTGTGATTTTGGGGAGTGAAAGTGCGTGATTCGATTCGGAAATCGTTCTCTCGACCAATCAAGATATCTGCACGATGGACGACTTGAGGGGATTCTTGAGGCAAGCGGGACAGGAGTTCCTCAATGCAGCTGGTGAGGCTGCAATGGGAGCGGCCAAGGATGTGGTCGGATCGGTGATCAACGAGATCTTCATCAAGAAGGAGGCCGACACCAAGAGGGTTCTGCCCAGCATCAAGAATATGAGAGTTCTGGGAGAGAAGAGCTCGAGCCTGGGACCCTATTCCGAGGTGCAGGACTATGAGACAATATTGAACAGCTGCCTGGCCAGTGGTTCCCTTTTCGAAGATCCACTTTTTCCGGCTTCGAACGAGTCTCTTCAGTTTTCCCGGCGTCCAGATCGTCACATCGAATGGCTGAGACCTCATGAAATTGCCGAGAATCCCCAGTTTTTTGTGGAGGGTTATTCGCGTTTTGATGTTCAGCAAGGCGAGCTTGGTGACTGTTGGCTCTTGGCTGCCACAGCCAATTTAACTCAGGAATCCAACCTTTTCTTTCGGGTAATTCCAGCGGAACAGAGTTTCGAGGAGAACTATGCTGGTATCTTCCATTTCCGCTTTTGGCAGTATGGTAAATGGGTTGATGTAATCATTGATGACCGTTTGCCCACTTATAATGGAGAGCTGATGTACATGCACTCCACGGAGAAGAACGAGTTCTGGAGCGCCCTGCTGGAGAAGGCTTATGCCAAACTTCATGGATCCTACGAGGCACTAAAGGGAGGCAGCACTTGCGAGGCCATGGAGGACTTTACTGGCGGCGTATCCGAGTGGTACGATTTAAAAGAAGCACCCGGCAATCTATTCACCATTCTGCAAAAAGCAGCTGAACGCAATTCCATGATGGGATGCTCGATTGAGCCTGATCCAAATGTCACGGAGGCAGAAACTCCTCAGGGCTTAATCCGTGGTCACGCTTACTCCATAACCAAGGTTTGCCTTATTGACATAGTAACGCCAAATCGTCAGGGAAAGATCCCTATGATAAGAATGCGAAATCCTTGGGGCAATGAAGCCGAGTGGAATGGACCATGGAGTGATAGCTCACCAGAATGGCGCTATATACCCGAGGAACAGAAGGCGGAGATTGGACTAACATTCGACAGAGACGGAGAGTTCTGGATGTCCTTCCAAGATTTTCTTAACCACTTCGATCGCGTGGAGATTTGCAATTTGTCGCCGGACTCACTGACCGAGGACCAACAAAACAGTGGCAAGCGAAAGTGGGAGATGTCCATGTATGAGGGAGAATGGACACCCGGTGTTACAGCTGGTGGTTGCCGCAATTTCCTGGATACCTTCTGGCACAACCCCCAGTATATTATCACCCTAGTCGATCCTGATGAGGAAGACGAAGAGGGACAGTGCACCGTCATCGTGGCCTTAATGCAAAAGAATCGCAGATCGAAGCGCAATATGGGAATGGAGTGTCTGACCATTGGTTTCGCTATCTATAGCCTTAATGATCGCGAACTGGAAAACCGTCCCCAGGGTCTGAACTTTTTCAGATACAAGTCTTCTGTGGGAAGATCGCCGCACTTTATCAACACCCGCGAAGTGTGTGCTCGCTTCAAATTGCCTCCTGGTCACTACCTGATTGTGCCTTCAACTTTCGATCCAAACGAGGAGGGAGAGTTCATCATTCGAGTGTTCTCAGAAACTCAAAATAACATGGAGTGCGTACAAGTAGACAATGACAATGAGTTTGTATATTAGAAATAATGAGGGGTTTCTATAACTAAAAGCTTCTTACGTGCAATATGTGGTATGTTGTGACTATAGTATTCTTTAATCTCTAGTGCTAGTAAATGTTTGACTAGATTTGTTTCTTTACCCTCTACACATTCCTGACAGATAAGTTGGTTATGCCATTTTTTAATCACTCCTCTTATATATATTTTTACCTGAGATTAACGCCTGCAGTATTCCAGAAACTCGAAATATATTTCTTCTAGATAAATTCAAATGTAATGTCGGTCTGTCTGTTACATGTTAAGAATAATTCTGATCAATATGAAGTTCAATTTTCTTAATTTATCAGTTATAAAAAGGGTGGCGGCAGCAACATAGTGAAATCTATTAACAAAGTTAAATTTTTCGGTTTATTTTTAACCCTTGTTTAAATTGTATTTTTGTCATGTAACGAGATATTTATTAAAGTAATAATAAAGGAAACTTCCAC