Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

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Summary

Gene Name HMGB1
Plot displaying the genomic locations of a parental gene (in scaffold_m16_p_10) and its retrocopy(ies). Each line represents a retrocopy.
Specie Molossus molossus
Full Name N/A
Also known as NULL
Coordinate scaffold_m16_p_10:98973146-98978966
Strand +
Gene summary N/A

Retrocopy(s) from HMGB1

Retroname Coord Strand Genomic Region ENSG
HMGB1P3 scaffold_m16_p_2:98221068-98221711 + Intergenic
 N/A UCSC
HMGB1P4 scaffold_m16_p_3:107555534-107555912 - Intergenic
 N/A UCSC
HMGB1P6 scaffold_m16_p_3:48249040-48250487 + Intergenic
 N/A UCSC
HMGB1P16 scaffold_m16_p_8:27081333-27081663 - Intragenic
 N/A UCSC
HMGB1P23 scaffold_m16_p_18:20156081-20157818 - Intergenic
 N/A UCSC
HMGB1P24 scaffold_m16_p_19:16565782-16566139 + Intergenic
 N/A UCSC
HMGB1P25 scaffold_m16_p_20:12262338-12263320 - Intragenic
 N/A UCSC
HMGB1P26 scaffold_m16_p_20:30065593-30065761 + Intergenic
 N/A UCSC
HMGB1P27 scaffold_m16_p_21:17081904-17083056 + Intragenic
 N/A UCSC
HMGB1P1 scaffold_m16_p_1:147562077-147562466 + Intergenic
 N/A UCSC
HMGB1P2 scaffold_m16_p_1:43626127-43626284 + Intergenic
 N/A UCSC
HMGB1P5 scaffold_m16_p_3:33859025-33859425 + Intergenic
 N/A UCSC
HMGB1P7 scaffold_m16_p_4:40098458-40099033 + Intragenic
 N/A UCSC
HMGB1P8 scaffold_m16_p_4:79140431-79140902 + Intergenic
 N/A UCSC
HMGB1P9 scaffold_m16_p_5:32848598-32848961 - Intergenic
 N/A UCSC
HMGB1P10 scaffold_m16_p_5:3509719-3510293 - Intergenic
 N/A UCSC
HMGB1P11 scaffold_m16_p_5:79598529-79599075 - Intergenic
 N/A UCSC
HMGB1P12 scaffold_m16_p_6:48364048-48364571 - Intergenic
 N/A UCSC
HMGB1P13 scaffold_m16_p_7:68922141-68922730 + Intragenic
 N/A UCSC
HMGB1P14 scaffold_m16_p_7:88702756-88703103 - Intergenic
 N/A UCSC
HMGB1P17 scaffold_m16_p_10:15614743-15615139 + Intragenic
 N/A UCSC
HMGB1P18 scaffold_m16_p_12:16834324-16834863 + Intergenic
 N/A UCSC
HMGB1P19 scaffold_m16_p_12:72521710-72522410 - Intergenic
 N/A UCSC
HMGB1P21 scaffold_m16_p_13:47211656-47212211 - Intergenic
 N/A UCSC
HMGB1P22 scaffold_m16_p_14:56679874-56680361 - Intragenic
 N/A UCSC
HMGB1P15 scaffold_m16_p_8:1781628-1781931 - Intergenic
 N/A UCSC
HMGB1P20 scaffold_m16_p_12:7881313-7881685 + Intergenic
 N/A UCSC

Expression

Transcript Sequences

>HMGB1_x1
AGCCATTGCAGTACATTGAGCTCCATAGAGACAGCGCCGGGGCAAGTGCGAGCCGGACGGGCACTGGGTGACTGTGTGCTCGCTGAGGAAAAGTAATTAAACATGGGCAAAGGAGATCCTAAGAAGCCGAGAGGCAAAATGTCATCATATGCTTTCTTTGTGCAAACTTGCCGGGAGGAGCACAAGAAGAAGCACCCAGATGCTTCAGTCAACTTCTCAGAGTTTTCTAAGAAGTGCTCAGAGAGGTGGAAGACCATGTCTGCTAAAGAGAAAGGAAAATTTGAAGACATGGCAAAGGCGGACAAGGCCCGTTATGAAAGAGAAATGAAAACTTATATCCCCCCTAAAGGGGAAACAAAAAAGAAATTCAAGGATCCCAATGCACCCAAGCAAAAATCAAAGGAGAGCATCCTGGCCTATCCATTGGTGATGTTGCAAAGAAGCTGGGAGAGATGTGGAATAACACTGCTGCAGATGACAAGCAGCCTTATGAGAAGAAGGCTGCTAAGCTGAAGGAGAAATACGAAAAGGATATTGCTGCATACCGAGCTAAAGGAAAGCCTGATGTGGCCAAAAAGGGAGTTGTCAAGGCTGAaaaaagcaagaaaaagaaggaagaggaggaagatgaggaagatgaagaggatgaagaggaggaggaagatgaagaagatgaagatgaagaagaagatgatgatgatgaataagTTGGTTCTAGCGCAGTTTTTTTTTTTCTTGTCTATAAAGCATTTAACCCCCCTGTACACAACTCACTCCTTTTAAAGAAAAAAATTGAAATGTAAGGCTGTGTAAGATTTGTTTTTAAACTGTACAGTGTCTTTTTTTGTATAGTTAACACACTACCGAATGTGTCTTTAGATAGCCCTGTCCTGGTGGTATTTTCAATAGCCACTAACCTTGCCTGGTACAGTATGGGGGTTGTAAATTGGCATGGAAATTTAAAGCAGGTTCTTGTTGGTGCACAGCACAAATTAGTTATATATGGGGATGGTAGTTTTTTCATCTTAAGTTGTCTCTGATGCAGCTTATACGAAATAATTGTTGTTCTGTTAACTGAATACCACTCTGTAATTGCAAAAAAAGTTGCAGCTGTTTTGTTGACATTCTGAATGCTTCTAAGTAAATACAATTTTTTTTATTAGTATTGTTGTCCTTTTCATAGATCTGAAATTTTTCTTCTTGAGGGGAGCTAGTCTTGCTTTTGCCCATTTTGGATCATATGATTTATTACAGTGTTTATCTTTTCATATAGTTAGCTGATAAAAAGCTTTTGTCTACACACCCTGCGTACTCGTGATGAGGGTAATGAGAGTTGAATTGCGACGGTTTTCATCCATAACTGAAACTAAATCCTGATCAGTTGATAGAAAATTTTACATAGCCCAGTTACATTTACAAAGTGAAAAGGAACCATTCTACTCACAGCATGGGATTATTAGAATCAAACATTTTGAAAGTCTGTCCTTGAAGGACTAATAGAAAAGTATGTTCTAATCTTTACATGAGGACTCTACATTTTTTAAACTCCCATTACCATGTAATGGCAGTTATGTATGCAGTTCCCACTTAGTTTCCACATTAAAGAAGACGAGAAAGTATCCCCAAAAGCGTGAGCTTAAAATACAAGACTGCCATGTGAAGTTTCTGTTGACATTAGTCCTGGCAAAGGCTCTGAAAAAAAAAAGTGCTGACTAAATGTCTTCTTCTGTTTATCTAAACATGGATTGCTTAGGAAACTTGAGATTCCATTAAAGGTATTTTTAATTGGGCCAAATTTTAAAATTATACCACATTTAATTAAAATCAAGTATTTTCCAAATTATGGTTTGCCCCTTTATAAATCAGACATGAGGGAAGAAGACACTTAAACTTTGTTCACAGTTTGAATTGTCCAATTTATTTAAACTTGATTTTTATAAAACTCAAAACTCATTAGGGTCATATGTTTATCCGCTTAGCTGTTTAGGAAACAATTTGGCAATTTTGTGGTTTTCGACATCATTCTCTTACAGTGCCAGTGTTTTAAAATAGCGTTCTTGTAATTTTACACGCTTTTGTGATGGAGTGCTGTTTTGTTATATAATTTTGACTTGGATCTTTTCATTTGCATTTGTTTATGTAATTTCAGGAGGAATACTGAACATCTGAGTCCTCAATGATACTAATAAACTAATAATTGCAGAGGTTT
>HMGB1_x2
ATGGGCAAAGGAGATCCTAAGAAGCCGAGAGGCAAAATGTCATCATATGCTTTCTTTGTGCAAACTTGCCGGGAGGAGCACAAGAAGAAGCACCCAGATGCTTCAGTCAACTTCTCAGAGTTTTCTAAGAAGTGCTCAGAGAGGTGGAAGACCATGTCTGCTAAAGAGAAAGGAAAATTTGAAGACATGGCAAAGGCGGACAAGGCCCGTTATGAAAGAGAAATGAAAACTTATATCCCCCCTAAAGGGGAAACAAAAAAGAAATTCAAGGATCCCAATGCACCCAAGAGGCCTCCTTCGGCCTTTTTCTTGTTTTGTTCTGAGTATCGCCCAAAAATCAAAGGAGAGCATCCTGGCCTATCCATTGGTGATGTTGCAAAGAAGCTGGGAGAGATGTGGAATAACACTGCTGCAGATGACAAGCAGCCTTATGAGAAGAAGGCTGCTAAGCTGAAGGAGAAATACGAAAAGGATATTGCTGCATACCGAGCTAAAGGAAAGCCTGATGTGGCCAAAAAGGGAGTTGTCAAGGCTGAaaaaagcaagaaaaagaaggaagaggaggaagatgaggaagatgaagaggatgaagaggaggaggaagatgaagaagatgaagatgaagaagaagatgatgatgatgaataa
>HMGB1_x3
ATGGGCAAAGGAGATCCTAAGAAGCCGAGAGGCAAAATGTCATCATATGCTTTCTTTGTGCAAACTTGCCGGGAGGAGCACAAGAAGAAGCACCCAGATGCTTCAGTCAACTTCTCAGAGTTTTCTAAGAAGTGCTCAGAGAGGTGGAAGACCATGTCTGCTAAAGAGAAAGGAAAATTTGAAGACATGGCAAAGGCGGACAAGGCCCGTTATGAAAGAGAAATGAAAACTTATATCCCCCCTAAAGGGGAAACAAAAAAGAAATTCAAGGATCCCAATGCACCCAAGAGGCCTCCTTCGGCCTTTTTCTTGTTTTGTTCTGAGTATCGCCCAAAAATCAAAGGAGAGCATCCTGGCCTATCCATTGGTGATGTTGCAAAGAAGCTGGGAGAGATGTGGAATAACACTGCTGCAGATGACAAGCAGCCTTATGAGAAGAAGGCTGCTAAGCTGAAGGAGAAATACGAAAAGGTAAGGAATATGGATTTGCTTGGTGTAGTGATGAAAGGGTATGCCCAGTGTTAG