Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name HMGB1
Plot displaying the genomic locations of a parental gene (in chr25) and its retrocopy(ies). Each line represents a retrocopy.
Specie Canis familiaris
Full Name high mobility group box 1
Also known as HMG1
Coordinate chr25:9542952-9670011
Strand +
Gene summary N/A

Retrocopy(s) from HMGB1

Retroname Coord Strand Genomic Region ENSG
HMGB1P16 chr22:59644905-59646088 - Intergenic
ENSCAFG00845021167 UCSC
HMGB1P1 chr1:106016564-106017637 + Intragenic
Intragenic
N/A UCSC
HMGB1P2 chr1:6822202-6822979 + Intergenic
N/A UCSC
HMGB1P3 chr2:33147090-33148310 + Intergenic
N/A UCSC
HMGB1P4 chr3:76179720-76180851 - Intergenic
N/A UCSC
HMGB1P5 chr5:46302386-46303581 - Intragenic
N/A UCSC
HMGB1P6 chr6:68576366-68577691 - Intergenic
N/A UCSC
HMGB1P7 chr9:36016451-36017043 + Intergenic
N/A UCSC
HMGB1P8 chr11:26622923-26623126 + Intergenic
N/A UCSC
HMGB1P9 chr11:52353406-52354814 - Intergenic
N/A UCSC
HMGB1P10 chr12:2308391-2308961 + Intergenic
N/A UCSC
HMGB1P11 chr12:37856548-37857235 + Intergenic
N/A UCSC
HMGB1P12 chr12:40762987-40763550 - Intragenic
N/A UCSC
HMGB1P13 chr12:47859378-47860533 + Intragenic
N/A UCSC
HMGB1P14 chr12:50658764-50659438 - Intergenic
N/A UCSC
HMGB1P15 chr22:50452507-50454114 - Intragenic
N/A UCSC
HMGB1P17 chr23:28802073-28802745 + Intragenic
N/A UCSC
HMGB1P18 chr38:12774899-12775598 + Intragenic
N/A UCSC
HMGB1P19 chr38:3390386-3392431 - Intergenic
N/A UCSC
HMGB1P20 chrX:18222186-18223417 - Intergenic
N/A UCSC
HMGB1P21 chrX:77411235-77412105 - Intergenic
N/A UCSC

Expression

Transcript Sequences

>NM_001002937.2
CTGGCTGGAGAGTAATGTTACAGAGCGGAGAGAGTGAGGAGGCTGCGTCTGGCTCCCGCTCTCACAGCCATTGCAGTACATTGAGCTCCATAGAGACAGCGCCGGGGCAAGTGAGAGCCAGACGGGCACTGGGCGACTCTGTGCCTCGCTGAGGaaaataattaaacatgGGCAAAGGAGATCCTAAGAAGCCGAGAGGCAAAATGTCATCATATGCATTCTTTGTGCAAACTTGCCGAGAGGAGCACAAGAAGAAGCACCCAGATGCTTCAGTCAACTTCTCAGAGTTTTCTAAGAAGTGCTCAGAAAGGTGGAAGACCATGTCtgctaaagagaaaggaaaatttgaagACATGGCTAAGGCGGACAAGGCCCgttatgaaagagaaatgaaaacttatatccCCCCtaaaggggaaacaaaaaagaagttcAAGGATCCCAATGCACCCAAGAGGCCTCCctcggcctttttcttgttttgttctgagTATCGCCCAAAAATCAAAGGAGAGCATCCCGGCCTATCCATTGGTGATGTTGCAAAGAAACTGGGAGAGATGTGGAATAACACTGCTGCAGATGACAAGCAGCCTTATGAAAAGAAGGCTGCTAAgctgaaggaaaaatatgaaaagGATATTGCTGCGTACCGAGCTAAAGGAAAGCCTGATGCGGCAAAAAAGGGAGTTGTCAAGGctgaaaagagcaagaaaaagaaggaagaggaggaagacgaggaggatgaagaggatgaggaggaggaagaagatgaagaagatgaagatgaagaagaagatgatgatgatgaataagTTGGTTCTAgcgcagttttttttttcttgtctataaagCATTTAACCCCCCTGTACACAACTcactccttttaaagaaaaaaattgaaatgtaaggctgtgtaagatttgtttttaaactgtacAGTGTCTTTTTTTGTATAGTTAACACACTACCGAATGTGTCTTTAGATAGCCCTGTCCTGGTGGTATTTTCAATAGCCACTAACCTTGCCTGGTACAGTATGGGGGTTGTAAATTGGCATGGAAATTTAAAGCAGGTTCTTGTTGGTGCACAGCACAAATTAGTTATATATGGGGATGGTAGTTTTTTCATCTTCAGTTGTCTCTGATGCAGCTTCTACGAAATAATTGTTGTTCTGTTAACTGAATACCACTCtgtaattgcaaaaaaaaaaaaaagttgcagctGTTTTGTTGACATTCTGAATGCTTCtaagtaaatacaattttttttattagtattgtTGTCCTTTTCATAGGtctgaaatttttcttcttgagggGAAGCTAGTCTTGCTTTTGCCCATTTTGGATCACATGGATTATTACAgtgtttatcttttcatataGTTAGCTGATAGAAAGCTTTTGTCTGCACCCTGCATATTCATGATGAGGGTAATAAAAGTCGAATTGAGACAGTTTTCATCCATAACTGAAACTCAAATCTTGATCAATTGATACCAGATCTCACATAGCCCGGTCACATTTATAAAGTGAAGAGTAACCAGTCTATTCACAGCATGGGATTAGTAGAATCAATCATTTTGAAAGTCTGTCCTTGAAGGACTAAGAAAAGTATGTTCTAATCTTTACATGAGGACTCTACATTCTTTAACTCCCATTACCATGTAATGGCAGTTATATTTGCAGTTCCCACATTAAAGAAGACCTGAGAATGTATCCCCAAAAGCGTGAGCTTAAAATACAAGACTGCCATATTAAATGTTTTGTTGACATTAGTCCCAGCAAAggctctggaaaacagaaaaaaaaaaaaaaaagtgctggctGTAAATGTCTTCTATTTATCTAAATGTGGATTTCTAAGGAAACTTGACTCTCCattaaaggtatttttaattaattgggCCAACTTCTAAAATGTATGCCACATTTAAAATCAGGTATATTTTCCTATATTAGAGTTTGCTCCTTTAAGTCAAATAGACGTAAAGGAAGAAGACCCTTAAAACTTGGTATTTCAGTATGATTTATCTgatttgaatttgatttttcttacaAAACCCAAACTCATTCATTAGAGTCATGTTTATCTACTTAGCAGTTTAGGGAACAATTTGGCAATTTTGTGGTTTTTTGAGATTATCGTTCTCTTAAAGTGCCAGTGTTTTAAAATAGCGTTCTTGTAATTTTACACGCTTTTGTGATGGAGTGCTGTTTTGTTATATAATTTTGACTTGGATTCtttccatttgcatttgtttATGTAATTTCAGGAAGAATACTGAACATCTGAGTCCTGGATGATACTAATAAACTAATAATTGCAGAGGtttta