Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name Macroh2a2
Plot displaying the genomic locations of a parental gene (in chr10) and its retrocopy(ies). Each line represents a retrocopy.
Specie Mus musculus
Full Name macroH2A.2 histone
Also known as H2afy2
Coordinate chr10:61574419-61620383
Strand -
Gene summary Histones are basic nuclear proteins that are responsible for the nucleosome structure of the chromosomal fiber in eukaryotes. Nucleosomes consist of approximately 146 bp of DNA wrapped around a histone octamer composed of pairs of each of the four core histones (H2A, H2B, H3, and H4). The chromatin fiber is further compacted through the interaction of a linker histone, H1, with the DNA between the nucleosomes to form higher order chromatin structures. This gene encodes a replication-independent histone that is a member of the histone H2A family. It replaces conventional H2A histones in a subset of nucleosomes where it represses transcription and may participate in stable X chromosome inactivation. [provided by RefSeq, Nov 2015]

Retrocopy(s) from Macroh2a2

Retroname Coord Strand Genomic Region ENSG
Macroh2a2P2 chr15:62089430-62091318 - Intergenic
ENSMUSG00000101167 UCSC
Macroh2a2P1 chr8:96648549-96649094 + Intergenic
ENSMUSG00000110506 UCSC

Expression

Transcript Sequences

>NM_207000.2
CGGCGGCACGCGGGCCGAACCTGCGGCCGGGATTGGCGCGCACTAGGCCACCGGGCGCCCGGAGCCCGCGGTGCAGCACCAGtATTGTGTAGGTGCCAAGAGACCACTCTGTCAGCAAGCTGAGAGGAAAATCGAGGCAAGATGTCAGGCCGGAGCGGGAAGAAGAAAATGTCCAAGCTGTCCCGGTCAGCCAGGGCCGGCGTCATCTTTCCAGTAGGCCGGTTGATGCGCTACTTGAAAAAGGGAACCTTCAAGTACAGGATCAGCGTAGGTGCTCCCGTCTACATGGCTGCGGTCATTGAGTACCTAGCAGCGGAAATCCTGGAGTTGGCTGGGAACGCTGCGAGGGACAACAAGAAGGCACGGATAGCCCCCAGACACATCCTGCTGGCCGTTGCCAACGACGAGGAACTCAACCAGCTACTGAAAGGAGTGACTATCGCCAGTGGGGGTGTCCTGCCGAGAATCCACCCCGAACTGCTGGCCAAGAAGCGAGGGACCAAAGGCAAGTCAGAGAcgatcctctccccacccccagagaaaagaggaaggaaggccgCATCAGGCAAGAAGGGGGGTAAGAAATCCAAGGCCACCAAGCCACGGACGTCCAAGAAGTCTAAAGCAAAGGACAGCGATAAAGAAGGAACATCAAATTCCACCTCGGAGGATGGGCCGGGAGATGGCTTCACCATCTTGTCTTCGAAGAGCCTCGTTCTGGGGCAGAAGCTATCCCTGACCCAGAGTGACATCAGCCATATTGGCTCCATGAGGGTGGAGGGCATCGTCCACCCAACCACAGCCGAGATCGACCTCAAGGAAGAGATAGGGAAAGCCTTGGAAAAGGCTGGGGGTAAAGAGTTCTTGGAAACAGTGAAGGAGCTTCGCAAGTCCCAAGGCCCTTTGGAAGTCGCTGAAGcTGCCGTCAGCCAATCCAGTGGACTCGCAGCCAAATTTGTCATCCACTGTCACATCCCCCAGTGGGGCTCCGACAAATGTGAAGAACAGCTGGAAGAGACCATCAAAAACTGCCTGTCTGCAGCAGAGGACAAGAAGCTTAAATCCGTCGCCTTCCCACCGTTCCCCAGTGGCAGAAACTGCTTCCCCAAACAGACGGCCGCCCAGGTGACCCTCAAGGCCATCTCGGCTCACTTCGACGACTCGAGCTCGTCCTCGCTGAAGAATGTGTACTTCCTGCTCTTCGACAGCGAGAGCATCGGCATCTACGTGCAGGAGATGGCCAAACTGGACACCAAGTAGCTCTCTCCAGTGGCGGCGAAGGAGGAGGATCGGCGTGACGTCACAAGAGCGggggttttattttttacaagGATTGCAGAAGGGTGACGGGGCATGGGAGCGGAGGGTGGCTGAGAGGGTGAACGGAGGCAGCGGGAACAGGTCCTGCCTGCCTGGTGAAGGGGTCCGGTGCATTTTATATTCTCTttacaaagggcctctcttccacaGTTAACCAGGTCTCCACCAGGGCTTTCTTTCcatgtgtttttcttcttgttgttttagaactttttcaaaaacaaacaagacaaacaaacataaaaataggcCTTCTTTAGATTTATAGCAGTGACTtttacacactctcacacacacacacacacacaaaatctgttCACAGTTTCTGTGTCTTTGGGTTCCTCCTTTTTCCAAGAGAAAAGGATGTGACTGCCCATCCTAGGTATACTGGCTGTCTCCCTCAGTGGAGAAGATGAGAAGAACATCTTGGGGTGCTTTTCTGTTATAGGGTCCCCTCCCTGACGCCTAAAATATTTGTAACTACACCTAAAAGGGTTTTGCTTcgggatttttgtttgttcggtttttttgtttttttaaagaaaaagaaaaatgagaagaaaaaaataaaagctccaGCGTCTTTCTTA