RCPedia: Genes

Summary

Gene Name	alphaTub84B	Plot displaying the genomic locations of a parental gene (in chr3R) and its retrocopy(ies). Each line represents a retrocopy.
Specie	Drosophila melanogaster
Full Name	alpha-Tubulin at 84B
Also known as	1t\|ALPHA 84C\|Alpha-Tubulin84B\|AlphaTub84B\|BEST:LD32507\|CG1913\|DM1alpha\|DTA1\|DmelCG1913\|T\|TBA1_DROME\|Talpha1\|Tub\|Tub 84B\|Tub1C\|Tub84B\|Tuba84B\|Tubalpha1\|Tubulin84B\|a-tub84B\|a1t\|aTub84B\|alpha-Tub\|alpha-T
Coordinate	chr3R:7086599-7088839
Strand	+
Gene summary	Predicted to enable GTP binding activity. Predicted to be a structural constituent of cytoskeleton. Involved in lysosome localization. Located in astral microtubule; centrosome; and perinuclear region of cytoplasm. Is expressed in several structures, including adult; embryonic/larval fat body; gonad; imaginal disc; and neuromuscular junction. Human ortholog(s) of this gene implicated in keratoconus; lissencephaly; lissencephaly 3; microcephaly; and visual epilepsy. Orthologous to several human genes including TUBA3D (tubulin alpha 3d). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from alphaTub84B

Retroname	Coord	Strand	Genomic Region	ENSG
alphaTub84BP1	chr3R:7531248-7532610	+	Intergenic	FBgn0003885	UCSC

Expression

Transcript Sequences

>NM_057424.4
TCATATTCGTTTTACGTTTGTCAAGCCTCATAGCCGGCAGTTCGAACGTATACGCTCTCTGAGTCAGACCTCGAAATCGTAGCTCTACACAATTCTGTGAATTTTCCTTGTCGCGTGTGAAACACTTCCAATAAAAACTCAATATGCGTGAATGTATCTCTATCCATGTTGGTCAGGCTGGTGTCCAGATTGGAAACGCCTGCTGGGAGCTCTACTGCTTGGAGCACGGCATCCAGCCCGATGGCCAGATGCCGTCTGACAAGACCGTGGGCGGAGGTGATGACTCGTTCAACACCTTCTTCAGCGAGACTGGAGCTGGCAAGCACGTGCCCCGCGCCGTGTTTGTGGATCTGGAACCCACTGTGGTCGATGAGGTCCGTACCGGAACCTACCGTCAGCTGTTCCACCCCGAGCAGCTGATCACTGGTAAGGAGGATGCGGCCAACAACTACGCCCGTGGCCACTACACCATCGGCAAGGAGATCGTCGATCTGGTTCTGGACAGGATCCGCAAGCTGGCCGATCAGTGCACCGGTCTGCAGGGCTTCCTCATCTTCCACTCGTTCGGTGGAGGTACCGGCTCCGGCTTCACCTCGCTGCTGATGGAGCGTCTCTCCGTGGACTACGGCAAGAAGTCCAAGCTGGAGTTCGCCATCTACCCAGCCCCCCAGGTGTCCACTGCCGTGGTCGAGCCCTACAACTCCATCCTGACCACCCACACCACCCTGGAGCATTCCGACTGCGCCTTCATGGTCGACAACGAGGCTATCTACGACATCTGCCGCCGCAATCTGGACATTGAGCGCCCCACGTACACCAACCTGAACCGTCTGATTGGCCAGATCGTGTCCTCGATTACCGCCTCTCTGCGATTCGATGGTGCCCTTAACGTGGATCTGACTGAGTTCCAGACCAACTTGGTGCCCTACCCACGTATTCACTTCCCTCTGGTGACCTACGCCCCCGTTATCTCCGCCGAGAAGGCCTACCACGAGCAGCTGTCGGTGGCTGAGATCACCAACGCCTGCTTCGAGCCGGCCAACCAGATGGTCAAGTGCGATCCCCGTCACGGCAAGTACATGGCCTGCTGCATGCTGTACCGCGGTGATGTTGTGCCCAAGGACGTCAACGCCGCTATTGCCACCATCAAGACCAAGCGCACCATTCAATTCGTCGACTGGTGCCCCACTGGCTTCAAGGTTGGCATCAACTACCAGCCACCCACCGTGGTGCCTGGAGGTGATTTGGCCAAGGTGCAGCGTGCCGTGTGCATGTTGTCCAACACCACGGCCATCGCCGAGGCCTGGGCCCGTCTGGACCACAAGTTCGATCTGATGTACGCCAAGCGTGCCTTCGTCCACTGGTACGTTGGTGAGGGTATGGAGGAGGGAGAGTTCTCCGAGGCCCGTGAGGATTTGGCTGCCCTCGAGAAGGACTACGAGGAGGTCGGCATGGACTCCGGTGACGGCGAGGGTGAGGGCGCTGAGGAGTACTAAGCGTCACGCCACTTCAACGCTCGATGGGAGCGTCATTGGTGGGCGGGGTAACCGTCGAAATCAGTGTTTACGCTTCCAATCGCAACAAAAAATTCACTGCAACACTGAAAAGCATACGAAAACGATGAAGATTGTACGAGAAACCATAAAGTATTTTATCCACAAAGACACGTATAGCAGAAAAGCCAAGTTAACTCGGCGATAAGTTGTGTACACAAGAATAAAATCGGCCAGATTCAGTGTTGTCAGAAATAAG