Summary

Gene Name	Hdac1
Specie	Mus musculus
Full Name	histone deacetylase 1
Also known as	HD1|Hdac1-ps|MommeD5|RPD3
Coordinate	chr4:129409897-129436439
Strand	-
Gene summary	Enables several functions, including E-box binding activity; Krueppel-associated box domain binding activity; and promoter-specific chromatin binding activity. Involved in several processes, including animal organ development; histone deacetylation; and regulation of gene expression. Acts upstream of or within several processes, including negative regulation of signal transduction; negative regulation of transcription by RNA polymerase II; and nervous system development. Located in heterochromatin; neuronal cell body; and nucleus. Part of NuRD complex and transcription repressor complex. Is expressed in several structures, including brain; early conceptus; embryo mesenchyme; genitourinary system; and sensory organ. Orthologous to human HDAC1 (histone deacetylase 1). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Hdac1

Retroname	Coord	Strand	Genomic Region	ENSG
Hdac1P2	chr12:77669825-77671800	-	Intergenic	ENSMUSG00000112003	UCSC
Hdac1P3	chr13:36176541-36177286	+	Intergenic	ENSMUSG00000114340	UCSC
Hdac1P4	chr14:7428467-7428885	+	Intergenic	ENSMUSG00000114542	UCSC
Hdac1P5	chr17:58048784-58050600	+	Intergenic	ENSMUSG00000117082	UCSC
Hdac1P6	chr17:78798993-78800970	+	Intergenic	ENSMUSG00000061062	UCSC
Hdac1P7	chr18:85865014-85866871	-	Intergenic	ENSMUSG00000118241	UCSC
Hdac1P1	chr3:76729369-76729744	+	Intergenic	ENSMUSG00000103702	UCSC
Hdac1P9	chrX:12780138-12781315	+	Intergenic	ENSMUSG00000083760	UCSC
Hdac1P8	chrX:113107714-113108863	+	Intergenic	ENSMUSG00000079963	UCSC

Expression

Transcript Sequences

>NM_008228.2

GCCGGGCGGCGAGCAAGATGGCGCAGACTCAGGGCACCAAGAGGAAAGTCTGTTACTACTACGACGGGGATGTTGGAAACTACTATTATGGACAAGGGCACCCCATGAAGCCTCACCGAATCCGCATGACTCACAATTTGCTGCTCAACTATGGTCTCTACCGAAAAATGGAGATCTACCGTCCTCACAAAGCCAATGCTGAGGAGATGACCAAGTACCACAGTGATGACTACATTAAATTCCTGCGTTCTATTCGCCCAGATAATATGTCTGAATACAGCAAGCAGATGCAGAGATTCAATGTTGGTGAGGACTGTCCGGTGTTTGATGGCTTGTTTGAGTTCTGTCAGTTGTCCACGGGAGGCTCTGTCGCAAGTGCTGTGAAGCTTAATAAGCAGCAGACGGACATCGCTGTGAACTGGGCCGGGGGCCTGCACCATGCAAAGAAGTCTGAAGCTTCTGGCTTCTGTTACGTCAATGACATcgtcctggccatcctggaactgcTAAAGTACCACCAGAGGGTGCTCTATATTGACATTGATATTCACCATGGCGATGGCGTGGAAGAGGCCTTCTATACTACAGACCGGGTCATGACTGTGTCCTTTCATAAATACGGAGAGTACTTCCCAGGAACTGGGGACCTACGGGACATTGGGGCTGGCAAAGGCAAGTACTATGCTGTGAACTACCCACTGCGAGACGGCATTGACGACGAATCCTATGAAGCCATCTTTAAGCCAgtcaTGTCCAAAGTAATGGAGATGTTCCAGCCTAGTGCAGTGGTCTTACAGTGTGGCTCAGATTCCCTGTCTGGGGACCGGTTAGGTTGCTTCAATCTGACCATCAAAGGACACGCCAAGTGTGTGGAGTTCGTGAAGAGTTTCAACTTGCCCATGCTGATGCTGGGAGGAGGTGGCTACACCATCCGGAATGTTGCTCGCTGCTGGACTTACGAAACAGCGGTGGCCCTGGACACAGAGATCCCTAATGAGCTGCCCTACAACGACTACTTTGAATACTTTGGACCGGATTTCAAGCTTCACATCAGCCCTTCCAACATGACCAACCAGAACACTAACGAGTACCTGGAGAAGATCAAGCAGCGTCTCTTTGAGAACTTGAGGATGCTGCCCCATGCCCCTGGGGTCCAGATGCAGGCCATCCCTGAGGATGCCATCCCCGAAGAGAGTGGGGATGAAGATGAGGAGGACCCTGACAAACGCATCTCCATCTGCTCCTCTGACAAACGCATTGCCTGTGAGGAAGAGTTCTCGGACTCAGATGAGGAGGGAGAAGGTGGTCGCAAGAACTCTTCTAACTTCAAAAAAGCCAAAAGAGTTAAAacagaggatgagaaagagaaagatcctGAAGAGAAAAAAGAAGTCACAGAAGAAGAGAAAACCAAGGAGGAGAAGCCAGAAGCCAAAGGGGTCAAAGAAGAGGTCAAGTTGGCCTGAGCAAGGTCTGCAGCCCCATCTTCTCCCCAAGTTCCTCACTTCtcagattttatattttctattcctctgtgtatttatataaaatatattaactatAACGTCCCCAGGGACCAGAGCACAGGGCAGTGGTGCTAGGAGGGCTCTTCCCAGAGCGACCTTGTCCATCctgccacccccctccccccatttgcgtggaaagaaaacaaccagaagagaaaaatcctGAACTGCCAAGTGCCTGCTTAGGAGCTCTGCTAAGATGCCCCTGTTAAACTTTTTAGGAGGGGTCTGGGTCTCCTAGGACCCCTTTTCAGGCTTGGGTAATAGCAGCCATTTTTAGATTGGTTCTGTTTATACCTTCCCACCCATCTTgggcaaacaaaaaaacttatatTGCCTGTCTTCCCCCAATTCTGTAGGTGGAGGTTGATAGCCTAGCTTCCTTTTtgagatattttcattttgtgaaacTCTTTGTAATAAAACAGCTCATTTCTATACCCTC