Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name Dppa5a
Plot displaying the genomic locations of a parental gene (in chr9) and its retrocopy(ies). Each line represents a retrocopy.
Specie Mus musculus
Full Name developmental pluripotency associated 5A
Also known as Dppa5|Esg1|ecat2
Coordinate chr9:78274334-78275481
Strand -
Gene summary Enables mRNA binding activity. Acts upstream of or within regulation of gene expression. Located in cytoplasm. Is expressed in several structures, including early conceptus and reproductive system. Orthologous to human DPPA5 (developmental pluripotency associated 5). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Dppa5a

Retroname Coord Strand Genomic Region ENSG
Dppa5aP1 chr1:13132164-13132755 + Intergenic
ENSMUSG00000069620 UCSC
Dppa5aP4 chr14:55043062-55043407 - Intragenic
ENSMUSG00000115626 UCSC
Dppa5aP6 chr17:78484839-78485420 - Intergenic
ENSMUSG00000037064 UCSC
Dppa5aP2 chr5:29743096-29743691 + Intergenic
ENSMUSG00000078182 UCSC
Dppa5aP8 chrX:8520703-8521241 + Intergenic
ENSMUSG00000082496 UCSC
Dppa5aP7 chrX:110209612-110210154 + Intergenic
ENSMUSG00000062226 UCSC
Dppa5aP3 chr11:107422626-107423078 - Intergenic
ENSMUSG00000083996 UCSC
Dppa5aP5 chr16:94159625-94160124 - Intergenic
ENSMUSG00000089814 UCSC

Expression

Transcript Sequences

>NM_025274.3
CGCCCACACAGGTACTAAAActtcctgaacctggagctgtGGGCCGTGCGTGGTGGATAAGCTTGATCTCGTCTTCCCTGAAGTCTGGTTCCTTGGCAGGATGATGGTGACCCTCGTGACCCGTAAAGATATCCCCCCGTGGGTGAAAGTTCCTGAAGACCTGAAAGATCCAGAAGTATTCCAGGTCCAGTCGCTGGTGCTGAAATATCTGTTTGGCCCACAGGGATCTCGAATGTCTCACATCGAGCAGGTGAGCCAGGCCATGTTTGAGCTGAAGAACCTGGAATCTCCCGAAGAACTTATCGAGGTCTTCATTTACGGCTCTCAAAACAACAAGATTCGGGCtaaatggatgcttcagtccatGGCTGAGAGGTACCACCTGCGCCAGCAAAAAGGAGTGCTGAAGCTGGAGGAATCCATGAAGACCCTGGAGCTAGGCCAGTGTATCGAGTGAAGCCAGTTTCCAGTCCTTGTGTCTCCGACCTGGATGCAGGTTAAGCTGTGGCCAGTGTTTGGTTCTGGCGGGATTTTTAGCTTTGTTACATCCTAGCAAGATATTCCTGGATCCCTGCTGCGCATTCTGATGTGAATCCCAAGGTTACCactctaaataaaaaataaaattgaagtgaTTAAAA