Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Advanced Search

Summary

Gene Name S100a11
Plot displaying the genomic locations of a parental gene (in chr2) and its retrocopy(ies). Each line represents a retrocopy.
Specie Rattus norvegicus
Full Name S100 calcium binding protein A11
Also known as -
Coordinate chr2:193863185-193868646
Strand +
Gene summary Predicted to enable several functions, including S100 protein binding activity; calcium-dependent protein binding activity; and protein homodimerization activity. Predicted to be involved in positive regulation of smooth muscle cell migration. Predicted to be located in nucleus and ruffle. Predicted to be active in cytoplasm and extracellular space. Orthologous to human S100A11 (S100 calcium binding protein A11). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from S100a11

Retroname Coord Strand Genomic Region ENSG
S100a11P1 chr1:185353997-185354267 + Intergenic
 N/A UCSC
S100a11P2 chr3:145893928-145894422 + Intergenic
 N/A UCSC
S100a11P3 chr6:101395401-101395723 - Intragenic
 N/A UCSC
S100a11P4 chr8:25268779-25269147 - Intragenic
 N/A UCSC
S100a11P5 chr12:38339837-38340332 - Intergenic
 N/A UCSC
S100a11P6 chr13:71039653-71040111 - Intergenic
 N/A UCSC
S100a11P7 chr14:110370433-110370806 - Intergenic
 N/A UCSC
S100a11P8 chr17:2165856-2166353 + Intergenic
 N/A UCSC
S100a11P9 chrX:100621175-100621669 - Intergenic
 N/A UCSC

Expression

Transcript Sequences

>NM_001004095.1
ATGCCTACAGAGACTGAGAGATGCATCGAGTCCCTGATTGCTGTTTTCCAGAAGTATAGTGGGAAGGATGGAAATAGCTGTCATCTCTCCAAAACTGAGTTCCTTTCCTTCATGAACACGGAGCTGGCCGCCTTCACGAAGAACCAGAAGGACCCCGGTGTCCTCGACCGCATGATGAAGAAGCTGGACCTCAACAGTGATGGGCAGCTAGATTTCCAAGAGTTTCTCAACCTTATTGGCGGCTTAGCTATAGCATGCCATGAGTCCTTCCTCCAGACTTCCCAGAAGCGTATCTAA
>XM_006232805.2
cggggcgcggccggagtcgggctgaggggagggaccgggACCCGGGCTGCCACTCCTGTCCCAGCAACCGTCAGCCTCAGTCGCAGCCGGGCCTCGCTCCTCAACTTGGCAAAAATGCCTACAGAGACTGAGAGATGCATCGAGTCCCTGATTGCTGTTTTCCAGAAGTATAGTGGGAAGGATGGAAATAGCTGTCATCTCTCCAAAACTGAGTTCCTTTCCTTCATGAACACGGAGCTGGCCGCCTTCACGAAGAACCAGAAGGACCCCGGTGTCCTCGACCGCATGATGAAGAAGCTGGACCTCAACAGTGATGGGCAGCTAGATTTCCAAGAGTTTCTCAACCTTATTGGCGGCTTAGCTATAGCATGCCATGAGTCCTTCCTCCAGACTTCCCAGAAGCGTATCTAACCCTCTCCATTCCCTTCCAGCCACCAAGTCATCGCCTCCTCCACTCCTTCCCCCATCCACACCTGCACTGAGCCCACCACACCTACCACACATGCAGCCCACGCCTGACAGGGAAAATAAAACAATGTCATTTTTTAAAATGTA