Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name HMGB1
Plot displaying the genomic locations of a parental gene (in chr13) and its retrocopy(ies). Each line represents a retrocopy.
Specie Pan troglodytes
Full Name N/A
Also known as -
Coordinate chr13:11547580-11553708
Strand -
Gene summary N/A

Retrocopy(s) from HMGB1

Retroname Coord Strand Genomic Region ENSG
HMGB1P27 chr8:29101377-29102741 + Intragenic
N/A UCSC
HMGB1P29 chr9:93802473-93803516 - Intergenic
N/A UCSC
HMGB1P31 chr10:45443879-45444099 + Intergenic
N/A UCSC
HMGB1P32 chr10:78085915-78086652 - Intragenic
N/A UCSC
HMGB1P1 chr1:146309510-146311729 - Intragenic
N/A UCSC
HMGB1P2 chr1:204628110-204629328 - Intergenic
N/A UCSC
HMGB1P3 chr1:44338433-44339711 + Intergenic
N/A UCSC
HMGB1P4 chr1:49183049-49184038 - Intergenic
N/A UCSC
HMGB1P5 chr1:79244312-79245472 + Intergenic
N/A UCSC
HMGB1P6 chr2A:54259232-54260766 + Intragenic
N/A UCSC
HMGB1P7 chr2A:8983055-8983417 - Intergenic
N/A UCSC
HMGB1P8 chr2B:104851056-104852615 + Intergenic
N/A UCSC
HMGB1P9 chr2B:117166338-117167501 + Intragenic
N/A UCSC
HMGB1P10 chr2B:57176279-57178526 - Intragenic
N/A UCSC
HMGB1P11 chr2B:77804080-77805188 + Intragenic
N/A UCSC
HMGB1P12 chr3:146901958-146903059 - Intragenic
N/A UCSC
HMGB1P13 chr3:22586679-22587866 + Intergenic
N/A UCSC
HMGB1P14 chr3:70981999-70982510 + Intergenic
N/A UCSC
HMGB1P15 chr3:80516476-80518647 - Intergenic
N/A UCSC
HMGB1P16 chr4:41196348-41198935 - Intergenic
N/A UCSC
HMGB1P17 chr4:51256041-51256957 - Intergenic
N/A UCSC
HMGB1P18 chr5:102399114-102400258 - Intergenic
N/A UCSC
HMGB1P19 chr5:103445416-103445860 + Intergenic
N/A UCSC
HMGB1P20 chr5:36200241-36201664 + Intragenic
N/A UCSC
HMGB1P21 chr5:37680535-37681679 - Intergenic
N/A UCSC
HMGB1P22 chr6:130224568-130225763 - Intergenic
N/A UCSC
HMGB1P23 chr6:52722401-52723733 - Intragenic
N/A UCSC
HMGB1P24 chr6:72761913-72763421 - Intragenic
N/A UCSC
HMGB1P25 chr8:105104719-105105693 - Intergenic
N/A UCSC
HMGB1P26 chr8:121153057-121154108 + Intragenic
N/A UCSC
HMGB1P28 chr8:78917172-78917449 - Intragenic
N/A UCSC
HMGB1P30 chr10:32026121-32027218 + Intragenic
N/A UCSC
HMGB1P33 chr11:116707734-116708944 - Intragenic
N/A UCSC
HMGB1P34 chr11:20323370-20324162 + Intergenic
N/A UCSC
HMGB1P35 chr12:58616268-58617669 - Intergenic
N/A UCSC
HMGB1P36 chr13:79781163-79781386 + Intragenic
N/A UCSC
HMGB1P37 chr14:39108471-39109594 + Intergenic
N/A UCSC
HMGB1P38 chr14:48424896-48426044 + Intergenic
N/A UCSC
HMGB1P39 chr15:34782523-34783754 + Intragenic
N/A UCSC
HMGB1P40 chr15:37125207-37126439 + Intragenic
N/A UCSC
HMGB1P41 chr15:49602773-49605007 - Intergenic
N/A UCSC
HMGB1P42 chr15:63365461-63366524 - Intragenic
N/A UCSC
HMGB1P43 chr15:67692011-67693626 - Intragenic
N/A UCSC
HMGB1P44 chr17:19408498-19409642 + Intragenic
N/A UCSC
HMGB1P45 chr20:57116741-57117913 - Intergenic
N/A UCSC
HMGB1P46 chr22:9578490-9579669 + Intragenic
N/A UCSC
HMGB1P47 chrX:106893473-106895664 + Intergenic
N/A UCSC
HMGB1P48 chrX:36202971-36204154 + Intragenic
N/A UCSC
HMGB1P49 chrX:50510391-50512615 - Intergenic
N/A UCSC
HMGB1P50 chrX:93942038-93943127 + Intergenic
N/A UCSC

Expression

Transcript Sequences

>XM_001140491.6
AGTCAGAACAGAAATACATCTCAGGGCCAAACCGATAGGAAACGAGGCTGCCTCGCGGTGGCACCGCCACCCCCCAACCGGGTTCCGAGCACCGGAGCTGGCTGCTGCTCCCTCTTCGGAGCAAAGTTTTATGCAAAGAGGGTGTTTTTTGAAACTTTCGGTGCACGAAAAATAACTAAACATGGGCAAAGGAGATCCTAAGAAGCCGAGAGGCAAAATGTCATCATATGCATTTTTTGTGCAAACTTGTCGGGAGGAGCATAAGAAGAAGCACCCAGATGCTTCAGTCAACTTCTCAGAGTTTTCTAAGAAGTGCTCAGAGAGGTGGAAGACCATGTCTGCTAAAGAGAAAGGAAAATTTGAAGATATGGCAAAGGCGGACAAGGCCCGTTATGAAAGAGAAATGAAAACCTATATCCCTCCCAAAGGGGAGACAAAAAAGAAGTTCAAGGATCCCAATGCACCCAAGAGGCCTCCTTCGGCCTTCTTCCTCTTCTGCTCTGAGTATCGCCCAAAAATCAAAGGAGAACATCCTGGCCTGTCCATTGGTGATGTTGCGAAGAAACTGGGAGAGATGTGGAATAACACTGCTGCAGATGACAAGCAGCCTTATGAAAAGAAGGCTGCGAAGCTGAAGGAAAAATACGAAAAGGATATTGCTGCATATCGAGCTAAAGGAAAGCCTGATGCAGCAAAAAAGGGAGTTGTCAAGGCTGAaaaaagcaagaaaaagaaggaagaggaggacgatgaggaagatgaagaggatgaggaggaggaggaagatgaagaagatgaagatgaagaagaagatgatgatgatgaataagTTGGTTCTAGCGCAGTTTTTTTTTTCTTGTCTATAAAGCATTTAACCCCCCTGTACACAACTCACTCCTTTTAAAGAAAAAAATTGAAATGTAAGGCTGTGTAAGATTTGTTTTTAAACTGTACAGTGTCTTTTTTTGTATAGTTAACACACTACCGAATGTGTCTTTAGATAGCCCTGTCCTGGTGGTATTTTCAATAGCCACTAACCTTGCCTGGTACAGTATGGGGGTTGTAAATTGGCATGGAAATTTAAAGCAGGTTCTTGTTGGTGCACAGCACAAATTAGTTATATATGGGGATGGTAGTTTTTTCATCTTCAGTTGTCTCTGATGCAGCTTATACGAAATAATTGTTGTTCTGTTAACTGAATACCACTCTGTAATTGCAAAAAAAAAAAAAAGTTGCAGCTGTTTTGTTGACATTCTGAATGCTTCTAAGTAAATACAATTTTTTTTATTAGTATTGTTGTCCTTTTCATAGGTCTGAAATTTTTCTTCTTGAGGGGAAGCTAGTCTTGCTTTTGCCCATTTTGAATCACATGAATTATTACAGTGTTTATCCTTTCATATAGTTAGCTAATAAAAAGCTTTTCTCTACACACCCTGCATATCATAATGGGGGTAAAGTTAAGTTGAGATAGTTTTCATCCATAACTGAACATCCAAAATCTTGATCAGTTAAGAAATTTCACATAGCCCACTTACATTTACAAACTGAAGAGTAATCAATCTACTCAAAGCATGGGATTATTAGAATCAAACATTTTGAAAGTCTGTCCTTGAAGGACTAATAGAAAAGTATGTTCTAACCTTTACTTGAGGACTCTATTCTTTAACTCCCATTACCATGTAATGGCAGTTATATTTTGCAGTTCCCACATTAAAGAAGACCTGAGAATGTATCCCCAAAAGCGTGAGCTTAAAATACAAGACTGCCATATTAAATTTTTTGTTGACATTAGTCTCAGTGAAGACTATGAAAATGCTGGCTATAGATGTCTTTTCCCATTTATCTAAATATGGACTGCTCAGGAAACGAGACTTTCCATTACAAGTATTTTTAATTAATTGGGCCAGCTTTTCAAAGATGCCACATTCAAAATAGGGTATATTTTCCTATATTACGGTTTGCCCCTTTATAAATCCAAGTAGATAGGAAAGAAGACACTTAAACTTTGCGTCTCAGTATGAATTATTCAATTTATTTGAATGATTTTTCTTTACAAAACAAACTCATTCATTAGTCATGTTTATCTGCTTAGCAGTTTAGGGAACAATTTGGCAATTTTGTGGTTTTCGAGATTATCATTTTCTTAAAGTGCCAGTATTTTAAAATAGCGTTCTTGTAATTTTACACGCTTTTGTGATGGAGTGCTGTTTTGTTATATAATTTTGACTTGGATTCTTTCCATTTGCATTTGTTTATGTAATTTCAGGAGGAATTCTGAACATCTGAGTCCTGGATGATACTAATAAACTAATAATTGCAGAGGTTTTAAA
>XM_003952381.4
ggcctcggcccgggcgcggcggcggcggcggccgggcggcggggggagcggcgccgCTGCGCTCGCTGGAACATGGCTGACTCGGGCCCGGCGCTGCTGGCTGGAGAGAAAACAAggcgggcgggcgggggagctgggcgCAGCAGTTCCGAGAAAAATAACTAAACATGGGCAAAGGAGATCCTAAGAAGCCGAGAGGCAAAATGTCATCATATGCATTTTTTGTGCAAACTTGTCGGGAGGAGCATAAGAAGAAGCACCCAGATGCTTCAGTCAACTTCTCAGAGTTTTCTAAGAAGTGCTCAGAGAGGTGGAAGACCATGTCTGCTAAAGAGAAAGGAAAATTTGAAGATATGGCAAAGGCGGACAAGGCCCGTTATGAAAGAGAAATGAAAACCTATATCCCTCCCAAAGGGGAGACAAAAAAGAAGTTCAAGGATCCCAATGCACCCAAGAGGCCTCCTTCGGCCTTCTTCCTCTTCTGCTCTGAGTATCGCCCAAAAATCAAAGGAGAACATCCTGGCCTGTCCATTGGTGATGTTGCGAAGAAACTGGGAGAGATGTGGAATAACACTGCTGCAGATGACAAGCAGCCTTATGAAAAGAAGGCTGCGAAGCTGAAGGAAAAATACGAAAAGGATATTGCTGCATATCGAGCTAAAGGAAAGCCTGATGCAGCAAAAAAGGGAGTTGTCAAGGCTGAaaaaagcaagaaaaagaaggaagaggaggacgatgaggaagatgaagaggatgaggaggaggaggaagatgaagaagatgaagatgaagaagaagatgatgatgatgaataagTTGGTTCTAGCGCAGTTTTTTTTTTCTTGTCTATAAAGCATTTAACCCCCCTGTACACAACTCACTCCTTTTAAAGAAAAAAATTGAAATGTAAGGCTGTGTAAGATTTGTTTTTAAACTGTACAGTGTCTTTTTTTGTATAGTTAACACACTACCGAATGTGTCTTTAGATAGCCCTGTCCTGGTGGTATTTTCAATAGCCACTAACCTTGCCTGGTACAGTATGGGGGTTGTAAATTGGCATGGAAATTTAAAGCAGGTTCTTGTTGGTGCACAGCACAAATTAGTTATATATGGGGATGGTAGTTTTTTCATCTTCAGTTGTCTCTGATGCAGCTTATACGAAATAATTGTTGTTCTGTTAACTGAATACCACTCTGTAATTGCAAAAAAAAAAAAAAGTTGCAGCTGTTTTGTTGACATTCTGAATGCTTCTAAGTAAATACAATTTTTTTTATTAGTATTGTTGTCCTTTTCATAGGTCTGAAATTTTTCTTCTTGAGGGGAAGCTAGTCTTGCTTTTGCCCATTTTGAATCACATGAATTATTACAGTGTTTATCCTTTCATATAGTTAGCTAATAAAAAGCTTTTCTCTACACACCCTGCATATCATAATGGGGGTAAAGTTAAGTTGAGATAGTTTTCATCCATAACTGAACATCCAAAATCTTGATCAGTTAAGAAATTTCACATAGCCCACTTACATTTACAAACTGAAGAGTAATCAATCTACTCAAAGCATGGGATTATTAGAATCAAACATTTTGAAAGTCTGTCCTTGAAGGACTAATAGAAAAGTATGTTCTAACCTTTACTTGAGGACTCTATTCTTTAACTCCCATTACCATGTAATGGCAGTTATATTTTGCAGTTCCCACATTAAAGAAGACCTGAGAATGTATCCCCAAAAGCGTGAGCTTAAAATACAAGACTGCCATATTAAATTTTTTGTTGACATTAGTCTCAGTGAAGACTATGAAAATGCTGGCTATAGATGTCTTTTCCCATTTATCTAAATATGGACTGCTCAGGAAACGAGACTTTCCATTACAAGTATTTTTAATTAATTGGGCCAGCTTTTCAAAGATGCCACATTCAAAATAGGGTATATTTTCCTATATTACGGTTTGCCCCTTTATAAATCCAAGTAGATAGGAAAGAAGACACTTAAACTTTGCGTCTCAGTATGAATTATTCAATTTATTTGAATGATTTTTCTTTACAAAACAAACTCATTCATTAGTCATGTTTATCTGCTTAGCAGTTTAGGGAACAATTTGGCAATTTTGTGGTTTTCGAGATTATCATTTTCTTAAAGTGCCAGTATTTTAAAATAGCGTTCTTGTAATTTTACACGCTTTTGTGATGGAGTGCTGTTTTGTTATATAATTTTGACTTGGATTCTTTCCATTTGCATTTGTTTATGTAATTTCAGGAGGAATTCTGAACATCTGAGTCCTGGATGATACTAATAAACTAATAATTGCAGAGGTTTTAAA
>XM_509611.6
TAGGAGCCGCGCTGGCTGGAGAGTAATGTTACAGAGCGGAGAGAGTGAGGAGGCTGCGTCTGGCTCCCGCTCTCACAGCCATTGCAGTACATTGAGCTCCATAGAGACAGCGCCGGGGCAAGTGAGAGCCGGACGGGCACTGGGCGACTCTGTGCCTCGCTGAGGAAAAATAACTAAACATGGGCAAAGGAGATCCTAAGAAGCCGAGAGGCAAAATGTCATCATATGCATTTTTTGTGCAAACTTGTCGGGAGGAGCATAAGAAGAAGCACCCAGATGCTTCAGTCAACTTCTCAGAGTTTTCTAAGAAGTGCTCAGAGAGGTGGAAGACCATGTCTGCTAAAGAGAAAGGAAAATTTGAAGATATGGCAAAGGCGGACAAGGCCCGTTATGAAAGAGAAATGAAAACCTATATCCCTCCCAAAGGGGAGACAAAAAAGAAGTTCAAGGATCCCAATGCACCCAAGAGGCCTCCTTCGGCCTTCTTCCTCTTCTGCTCTGAGTATCGCCCAAAAATCAAAGGAGAACATCCTGGCCTGTCCATTGGTGATGTTGCGAAGAAACTGGGAGAGATGTGGAATAACACTGCTGCAGATGACAAGCAGCCTTATGAAAAGAAGGCTGCGAAGCTGAAGGAAAAATACGAAAAGGATATTGCTGCATATCGAGCTAAAGGAAAGCCTGATGCAGCAAAAAAGGGAGTTGTCAAGGCTGAaaaaagcaagaaaaagaaggaagaggaggacgatgaggaagatgaagaggatgaggaggaggaggaagatgaagaagatgaagatgaagaagaagatgatgatgatgaataagTTGGTTCTAGCGCAGTTTTTTTTTTCTTGTCTATAAAGCATTTAACCCCCCTGTACACAACTCACTCCTTTTAAAGAAAAAAATTGAAATGTAAGGCTGTGTAAGATTTGTTTTTAAACTGTACAGTGTCTTTTTTTGTATAGTTAACACACTACCGAATGTGTCTTTAGATAGCCCTGTCCTGGTGGTATTTTCAATAGCCACTAACCTTGCCTGGTACAGTATGGGGGTTGTAAATTGGCATGGAAATTTAAAGCAGGTTCTTGTTGGTGCACAGCACAAATTAGTTATATATGGGGATGGTAGTTTTTTCATCTTCAGTTGTCTCTGATGCAGCTTATACGAAATAATTGTTGTTCTGTTAACTGAATACCACTCTGTAATTGCAAAAAAAAAAAAAAGTTGCAGCTGTTTTGTTGACATTCTGAATGCTTCTAAGTAAATACAATTTTTTTTATTAGTATTGTTGTCCTTTTCATAGGTCTGAAATTTTTCTTCTTGAGGGGAAGCTAGTCTTGCTTTTGCCCATTTTGAATCACATGAATTATTACAGTGTTTATCCTTTCATATAGTTAGCTAATAAAAAGCTTTTCTCTACACACCCTGCATATCATAATGGGGGTAAAGTTAAGTTGAGATAGTTTTCATCCATAACTGAACATCCAAAATCTTGATCAGTTAAGAAATTTCACATAGCCCACTTACATTTACAAACTGAAGAGTAATCAATCTACTCAAAGCATGGGATTATTAGAATCAAACATTTTGAAAGTCTGTCCTTGAAGGACTAATAGAAAAGTATGTTCTAACCTTTACTTGAGGACTCTATTCTTTAACTCCCATTACCATGTAATGGCAGTTATATTTTGCAGTTCCCACATTAAAGAAGACCTGAGAATGTATCCCCAAAAGCGTGAGCTTAAAATACAAGACTGCCATATTAAATTTTTTGTTGACATTAGTCTCAGTGAAGACTATGAAAATGCTGGCTATAGATGTCTTTTCCCATTTATCTAAATATGGACTGCTCAGGAAACGAGACTTTCCATTACAAGTATTTTTAATTAATTGGGCCAGCTTTTCAAAGATGCCACATTCAAAATAGGGTATATTTTCCTATATTACGGTTTGCCCCTTTATAAATCCAAGTAGATAGGAAAGAAGACACTTAAACTTTGCGTCTCAGTATGAATTATTCAATTTATTTGAATGATTTTTCTTTACAAAACAAACTCATTCATTAGTCATGTTTATCTGCTTAGCAGTTTAGGGAACAATTTGGCAATTTTGTGGTTTTCGAGATTATCATTTTCTTAAAGTGCCAGTATTTTAAAATAGCGTTCTTGTAATTTTACACGCTTTTGTGATGGAGTGCTGTTTTGTTATATAATTTTGACTTGGATTCTTTCCATTTGCATTTGTTTATGTAATTTCAGGAGGAATTCTGAACATCTGAGTCCTGGATGATACTAATAAACTAATAATTGCAGAGGTTTTAAA