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Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name RPL10A
Plot displaying the genomic locations of a parental gene (in chr6) and its retrocopy(ies). Each line represents a retrocopy.
Specie Homo sapiens
Full Name ribosomal protein L10a
Also known as CSA19|Csa-19|L10A|NEDD6
Coordinate chr6:35468401-35470781
Strand +
Gene summary Ribosomes, the organelles that catalyze protein synthesis, consist of a small 40S subunit and a large 60S subunit. Together these subunits are composed of 4 RNA species and approximately 80 structurally distinct proteins. This gene encodes a ribosomal protein that is a component of the 60S subunit. The protein belongs to the L1P family of ribosomal proteins. It is located in the cytoplasm. The expression of this gene is downregulated in the thymus by cyclosporin-A (CsA), an immunosuppressive drug. Studies in mice have shown that the expression of the ribosomal protein L10a gene is downregulated in neural precursor cells during development. This gene previously was referred to as NEDD6 (neural precursor cell expressed, developmentally downregulated 6), but it has been renamed RPL10A (ribosomal protein 10a). As is typical for genes encoding ribosomal proteins, there are multiple processed pseudogenes of this gene dispersed through the genome. [provided by RefSeq, Jul 2008]

Retrocopy(s) from RPL10A

Retroname Coord Strand Genomic Region ENSG
RPL10AP14 chr10:38231171-38231518 - Intergenic
N/A UCSC
RPL10AP5 chr1:242365179-242365848 + Intragenic
ENSG00000235467 UCSC
RPL10AP7 chr1:40364764-40365120 + Intergenic
ENSG00000213172 UCSC
RPL10AP1 chr14:103412097-103412792 - Intragenic
ENSG00000244691 UCSC
RPL10AP15 chr16:85815845-85816567 - Intergenic
ENSG00000214259 UCSC
RPL10AP8 chr1:81208538-81209240 + Intergenic
ENSG00000235089 UCSC
RPL10AP16 chr18:34573991-34574305 - Intragenic
ENSG00000267585 UCSC
RPL10AP6 chr3:61742424-61743137 - Intragenic
ENSG00000226360 UCSC
RPL10AP9 chr4:15731028-15731661 - Intragenic
Intragenic
ENSG00000214846 UCSC
RPL10AP11 chr5:138620348-138620981 + Intergenic
ENSG00000232174 UCSC
RPL10AP10 chr5:86884230-86884912 - Intergenic
ENSG00000242477 UCSC
RPL10AP12 chr8:18383260-18383948 - Intergenic
ENSG00000244593 UCSC
RPL10AP3 chr8:34322970-34323672 - Intergenic
ENSG00000215264 UCSC
RPL10AP2 chr8:47157086-47157799 + Intergenic
ENSG00000188873 UCSC

Expression

Transcript Sequences

>NM_007104.5
AGTCTCTTTTCCGGTTAGCGCGGCGTGAGAAGCCATGAGCAGCAAAGTCTCTCGCGACACCCTGTACGAGGCGGTGCGGGAAGTCCTGCACGGGAACCAGCGCAAGCGCCGCAAGTTCCTGGAGACGGTGGAGTTGCAGATCAGCTTGAAGAACTATGATCCCCAGAAGGACAAGCGCTTCTCGGGCACCGTCAGGCTTAAGTCCACTCCCCGCCCTAAGTTCTCTGTGTGTGTCCTGGGGGACCAGCAGCACTGTGACGAGGCTAAGGCCGTGGATATCCCCCACATGGACATCGAGGCGCTGAAAAAACTCAACAAGAATAAAAAACTGGTCAAGAAGCTGGCCAAGAAGTATGATGCGTTTTTGGCCTCAGAGTCTCTGATCAAGCAGATTCCACGAATCCTCGGCCCAGGTTTAAATAAGGCAGGAAAGTTCCCTTCCCTGCTCACACACAACGAAAACATGGTGGCCAAAGTGGATGAGGTGAAGTCCACAATCAAGTTCCAAATGAAGAAGGTGTTATGTCTGGCTGTAGCTGTTGGTCACGTGAAGATGACAGACGATGAGCTTGTGTATAACATTCACCTGGCTGTCAACTTCTTGGTGTCATTGCTCAAGAAAAACTGGCAGAATGTCCGGGCCTTATATATCAAGAGCACCATGGGCAAGCCCCAGCGCCTATATTAAGGCACATTTGAATAAATTCTATTACCAGTT