Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

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Summary

Gene Name Pms1
Plot displaying the genomic locations of a parental gene (in chr9) and its retrocopy(ies). Each line represents a retrocopy.
Specie Rattus norvegicus
Full Name PMS1 homolog 1, mismatch repair system component
Also known as -
Coordinate chr9:53120656-53206520
Strand +
Gene summary Predicted to enable ATP hydrolysis activity and enzyme binding activity. Involved in response to xenobiotic stimulus. Predicted to be located in nucleus. Predicted to be part of mismatch repair complex. Human ortholog(s) of this gene implicated in Lynch syndrome; dermatomyositis; pancreatic ductal carcinoma; and polymyositis. Orthologous to human PMS1 (PMS1 homolog 1, mismatch repair system component). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Pms1

Retroname Coord Strand Genomic Region ENSG
Pms1P1 chr8:6311772-6313356 - Intergenic
 N/A UCSC

Expression

Transcript Sequences

>NM_001009535.1
GTAGGGCCTGCTGCTCCGGGTCTACTGAGTGCCTGCAGCGGTGGGTGGTGAATCTCATAACCTCTCACGAGCTAGAAGGCTAGGATGAAACAGTTGCCTGCAGCGACAGTTCGCCTCCTGTCCAGTTCTCAGACAATCACTTCAGTGGTCAGTGTTGTGAAAGAGCTCATTGAAAACTCCTTGGATGCCGGAGCCAACAGCATTGATGTTAAACTGGAGAACTATGGGTTTGATAAAATTGAGATTCGGGACAATGGTGCGGGCATCAAGGCTGTGGATGTCCCTGTCATGGCAGTAAAGTACTACACCTCCAAGATCAGCAGTCATGAAGACCTTCAAACTCTCACAACCTATGGTTTCCGTGGTGAAGCCTTGGGGGCAATATGCAATGTTGCAGAGGTGGTAGTGACAACAAGGACAGCTGCTGATGACTTTAGCACCCAGTATGTTTTAGATGGCAGTGGCCACATACTTTCTCAGAAGCCTTCACATCTTGGTCAAGGTACAACTGTAACGGTTCTAAAGTTGTTTAAGAATCTTCCTGTAAGGAGACAATTTTATTCAACCCCAAAAAAGTGTAAAGATGAACTAAAAAATGTACAGGATCTTCTCATAAGCTACGCTGTCCTGAAACCTGACCTAAGGATTACTTTTGTACATAATAAGGCAGTTATTTGGCAGAAAAGTAGAGTTCCAGATCACAGGATGGCTCTAATGTCGGTTCTGGGAACTGCTGTCATGGGCAACATGGAGTCTGTTGAGCGGTACTGTGAAGACTCTCAGATTCACCTACGTGGATTATTTCCAAAGCATGATGCAGACCACAATTCCACAAGTCTTTCAACCCCAGAGAGAAGTTTCATCTTTATTAATAGTCGACCAGTACATCAAAAAGATATACTAAAGTTAATCCGACATTATTATAACCTGAAGTGCCTAAAGGAATCTACCCGCTTGTACCCCATTTTCTTTCTGAAAATTGATGTTCCTTCAGCTGAGGTGGATATAAATCTAACACCAGATAAAAGTCAAGTGCTATTACAGAATAAGGAATCTGTTTTAATTGCTCTTGAAAATCTGCTGATGACCTGTTATGGACCACTACCCACTACAGAGTCTTATGAAAATAACAGAGTAGATGTTTCCTCAGCTAATGTTGTCATTAGTGAAACAACAGAAACAGATGTGCTTTTTAATAAAATGGAATCATCCGGAAATAAATACCCAAATGCTGATACTTTGGCTATTCCCTTCCAAAATGATGAATCTAGAAAAAACACTGACCATCATTTAAACGAACAGATAAATATAGGTCACTGTGATGGTCATTTTAGTGGTGAATATTCTCACATTAATAAGGACACGTTTCAAAATATCCCTAGGAATAATTTATCATCAGAGGCTAATCAGAGTAAACACAGTGAGACTCATTCTGCAGGTTCTATTGAGCATATCCAAGGAGAAAATGGCAGGAGTGGTACAGGAGAAAATGGGGAAGATGGAAAAAAAACACTTCCTGAGAAAGCTCTGGAAATCTGTGTAGACGACTGGAGCAAGGGAAATGTGTTTAATTCAATGGGAGAGAATATCGAACCTGTGAAAATTTTAGTGCCACAAAAGAGCTTATCATGTAAAGTGACTAATAGTCACCCAAACCCTGAACCAGAGAATCTCAGTGTTGGTCCTGGTAGCAGAACATCAAATGTTATTGATAACAGGCCTGGGCAGCTTACAGCCTATGACTTAATTAGCAGTCGAGCAGTAAGAAAGCCCATGTCAGCTTTGGCCCTGTTCATCAAAGACCACCGCAATNCATTCCTCGCAGAGAATCCCAAGACTGGTTTGGAGGATGTGACAGCACAAATTAAAGCACAGTGGGAGACACTGAGTGAAGAGGAAAAACACAAATATGAGGAAAAGGCTAAAAAAGACTTGGAACGATACAATAACCAAATGAAGAAAGCCATTGAACAGGAAGCACAAGTGTCATTAAAAGATGGCAGGAAAAAGCTAAGAGCCACTGGTGCGTGGGGCTGCACACAGAGACACAAGGTGAAAGACTTGTCTAACCAGCCAAAACTGGACGAGCTCTTCCAGTCCCAGAATGAAAAGAAGAGTGAAAATATTAAAATAACAAAGATCCCCTTTTCTATGGAAAACTTAAAAGTGAACTTTAACAAACAAAAGGAAGTTGACTTAGAGGAGAAGGATGAGATTTGCCTGATCCACAGTCTCAAGTTTCCTGATGCATGGCTGGTCACATCCAGAGCAGATGTCATGTTGCTGAACCCATACAGAGTGGAGGAAGCCCTGCTATTTAAAAGACTTCTTGAGAATCATAAATTCCTTGCAGAACCGCTAGAAAAGCCAATCGTATTAACAGAGAGTCTTTTTAATGGGTCTGATTATTTAGAAGTTTTACATAAAATGTCGACAGTTGAGGAAAGATGCCGTGGATCAGTTTACCTGTGTGACCCTCGTCTCACAGCAAATGGCTTCAAGATCAGATTGACACCAGGAGTTTCCAGTGCTGAGAACTACTTGGAAATAGAAGGCATGGCTAAGTGCCTCCCGTTCTATGGAGTAATGGATCTAAAGGAAATTCTTAATGCTATAGTAAACAAAAACGCAAAGGAGATTTATGAATGTAGACCTCGAAAAGTGATAAATTATCTGGAGGGAGAAGCCGTCCGCCTATCCAGACAGCTACCCATGTACTTACCGCAAGAGGATGTCCAGGATCTTATCTATAAAATGAAGCACCAGTTCGGAAAAGAAATTAAAGGGTGTGTTCATGGTCGCCCATTTCTTCATCATTTGATCCATCTTCCAGGAACTTCATGATTAAGTTTATGACCATTAGTTACTATGGAAATTGATGTGGCTCTCAAACTTGTACTAAAATGATTATTTGTATACTGGAAAAGATTTTTTAAAGTTGTAAAATATGTATAAATAAACGACGTGGACTATAAAA