Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name Cks2
Plot displaying the genomic locations of a parental gene (in chr17) and its retrocopy(ies). Each line represents a retrocopy.
Specie Rattus norvegicus
Full Name CDC28 protein kinase regulatory subunit 2
Also known as RGD1562047
Coordinate chr17:13587664-13593423
Strand -
Gene summary Predicted to enable several functions, including cyclin-dependent protein serine/threonine kinase activator activity; histone binding activity; and ubiquitin binding activity. Predicted to be involved in regulation of mitotic cell cycle. Predicted to act upstream of or within several processes, including meiosis I; mitotic cell cycle phase transition; and regulation of transcription by RNA polymerase II. Predicted to be part of SCF ubiquitin ligase complex and cyclin-dependent protein kinase holoenzyme complex. Orthologous to human CKS2 (CDC28 protein kinase regulatory subunit 2). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Cks2

Retroname Coord Strand Genomic Region ENSG
Cks2P1 chr3:109812379-109812959 - Intergenic
N/A UCSC
Cks2P2 chr4:142969740-142970317 - Intragenic
N/A UCSC
Cks2P3 chr8:64296402-64296910 - Intergenic
N/A UCSC
Cks2P4 chr9:79831550-79832032 - Intragenic
N/A UCSC
Cks2P5 chr16:4162587-4163065 - Intragenic
N/A UCSC
Cks2P6 chr17:24898806-24899408 + Intergenic
N/A UCSC
Cks2P7 chr17:77568348-77568777 + Intergenic
N/A UCSC

Expression

Transcript Sequences

>NM_001126083.1
GCCTGCGGTCGTTGGCCTCATTCGAGTCGTTGCCCCGGCCTTAGGCGGACGTGGAGCTCCTTGTGCCCCGTTTCCTTGTCCCGGTTTTTTCCTTCGCACGCCAGCAGGATGGCCCACAAGCAGATCTACTACTCAGACAAGTACTTCGACGAGCACTACGAGTACCGGCATGTCATGTTACCCAGAGAACTTTCTAAACAAGTACCCAAAACTCATCTGATGTCCGAAGAGGAGTGGAGGAGACTTGGTGTTCAACAGAGTCTAGGATGGGTTCATTACATGATCCATGAGCCAGAACCGCATATTCTTCTCTTTAGACGGCCTCTTCCAAAAGAACAACAAAAATGAAGTACAGCTGGGATCATCTAATAATCTTTTTCAAATTTAATGTATATGTGTATATAAGGTAGTATTCAGTGAATACTTGAAAAATGTACAAATCTTTCATCCATACCTGTGCATGAGCTGTATTCTTCACAGCAACAGAGCTCGGTTAAATGCAACTGCAAGTAGGGTTATTTTAAGTTGTTAAAGATAAATTTTCTTGTAGTTTTTTTCTTAATATAAATGCCTGTTTTACTTTACCTGTTTTGTTAAATAAAGTTTGTATATTGCA