Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

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Summary

Gene Name Lims1
Plot displaying the genomic locations of a parental gene (in chr20) and its retrocopy(ies). Each line represents a retrocopy.
Specie Rattus norvegicus
Full Name LIM zinc finger domain containing 1
Also known as Pinch1|RGD1560732
Coordinate chr20:27895981-28004767
Strand +
Gene summary Predicted to enable protein kinase binding activity and zinc ion binding activity. Predicted to be involved in several processes, including positive regulation of cell-substrate adhesion; positive regulation of signal transduction; and regulation of gene expression. Predicted to act upstream of or within several processes, including cell-matrix adhesion; negative regulation of apoptotic process; and negative regulation of cell population proliferation. Part of protein-containing complex. Orthologous to human LIMS1 (LIM zinc finger domain containing 1). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Lims1

Retroname Coord Strand Genomic Region ENSG
Lims1P1 chr1:43726692-43729557 + Intragenic
 N/A UCSC

Expression

Transcript Sequences

>XM_006256387.3
CTGATAAGTGGATAGTagacagaatcttactgtataactcaggctgggctttattgctgtggagcccatggtggctttaaattctaaatccgtctacctcagcctctcaagggctggtattactggcatgcatcaccactcctagcAGCTCTTTCAGAGTTAAAGTATGATTGGAatatagctcagcagtttcacttttcagcatttcttaaggagaaggataaatctacatttacatagaagcctctacacaatttttatttgtaatagcctaaaactatgacctatttaaatcttcagtgagtaaatgatttgaccacatatacattaatactgctgtatattatacagcaacacaagatcaaactgcatatatgtgtatagcaacctggacagatctcagtggcatgatactgacttaaacaaagccaacctttggccaccatgtatgatagggttccacaaatgacactttctacaggtgaaaaacagattagtTAGGAGTGCAGTAAGATTTCTATGGGCAGAGATCATTGTCCTGCTTGATTGGTGGCCACAGTAGCCACACACTTGATGCCACTAGAATATATACCACTGTCAGGCTCCCAACTTTGCTACTCTAGTTCCCCTTCTTCATGGAGGAAACTGAAGGAGTGGCAAATGTTCCATCATCAAGAAATTGATCACCTGATTCTGTCTTTCCTCTGTTTTACTTTGCCCTTAAGAAAAGAAACCAAAACCAAGAGCATATAGATAAATGCAAAGGGTAACGTTTGCACAGGGAAGCTGACTTCTAGTGCTTTCCCTCTCCTATCCTCAGTTTGGAGTCTCAGCAGGTGTAGGGCTGCAGTCTTGGAATTCCTCATCATTTTCATTGCTTTGGACTCAAAGTAGGGAGATGCGATCTCATTTCCTGCATCTGATCCCATTTTGTACCTGCCACATACTGATTTTGAGTTCCTGTTTTATTTCCCAGTGATTCTATTCAGCCATTTTCTCTCATAGAAGTTATAGCTTAGCCCTGTCACTTATTATTCAGTCTCTTTGTGGCCTTGGTTTTCTCATTTGTGAGTAACACCTGTTTCATAGAGGATATGGTGATGAGATAGAAGACAAGTGCCAACTCTCCTATGTCCCCATTCACTGTTTCTCAGGCTATATGGTGCTTGTCTTTCAAGGCCTCATGGCTCTCCTATTATCAGTATGGCCTGCAGTGCCCCACACTATGCCTTGTGAGCACTATGCTCACAAGTAGTGCCTTGAGGTGCTTGTTCTGGGTAGGATGGCTTACTGGACTAGAGAATGGAACAGCAGAACCCCAAACCCTTGTGTTGCCTCATGCCACAGTGTTGCTATTATCATCATGATGAACAAAATTACAAAACAGTAGTTTGCCCTAAATATAGCAGGAATGCCATGAAGAATTGGTGACTCTCCTGTTACAGGATTAGCAGGATTAAATCAAAGAGTTACAATTAAACTCCAGTTCTTTCTGGTTCATTGAAGCTTTTACTGTTTCGTTTCTTGTATCAAGAGCAAAGATAATAAAAGACTACATAGAGCTTCATTTCAGGGGCTCACAAGTCCTCATTGGAGCTTGTCAAGCTTTTCAAATATTTCTGTGCACACCCAAATGGAGATTCACTCAGACACAAATTGTCACTGCCCTGTGAAATGACTTTGAAAGCTTCTAGAAGTCATAATCCGGACTGCTGTGCCGCCGAGCTCTTAACATGAAAAGTCAGGAGTGACCCTGGCAGCTGGGTGACGCATGCGGGAACAGTGGGAGTGACCCTGGCTGGGAAACAGGAGGCCTGGATATTGTTTCTCTTCTCTGTATCCTGCTGGGCATCGCAGGGCTCTGAACTCTGGAGCTTGTACAATGGCCTTCCCAGGACGGGCACGCCCGAGCACTATCCCAGAGAATGAAGAAATCCCCCAGACAGCCCTTAACAGTGTCCTCGAAGCTAATGGGAATGAAGACGAGAGGGCTGTGTCGAACCTGCAGCGCAGGCACAGTGATATAAAAGTCTACAAGGAATTCTGTGATTTCTATGCGAAATTCAACATGGCCAATGCTTTGGCCAGTGCCACGTGTGAACGCTGCAAGGGGGGCTTTGACCCTGCTGAGAAGATCGTGAACAGTAATGGTGAGCTGTACCATGAACAGTGTTTCGTGTGTGCTCAGTGCTTCCAGCAGTTCCCAGAAGGACTCTTTTATGAGTTTGAAGGAAGAAAGTACTGTGAGCATGATTTCCAGATGCTCTTTGCTCCCTGCTGCCACCAGTGTGGTGAATTCATCATTGGCAGGGTTATCAAAGCCATGAACAACAGCTGGCATCCTGAGTGCTTCAGATGTGACCTCTGCCAGGAAGTGCTGGCAGACATAGGGTTTGTCAAGAATGCTGGCAGACACCTGTGTCGCCCATGTCATAATCGTGAAAAGGCCAGAGGCCTTGGAAAATACATCTGCCAGAAATGCCATGCCATCATTGATGAACAGCCTTTGATTTTCAAGAACGACCCTTACCACCCAGACCACTTCAACTGTGCCAACTGCGGGAAGGAGCTAACTGCTGATGCTCGGGAGCTGAAAGGGGAGCTATACTGTCTGCCATGTCATGATAAGATGGGGGTCCCTATCTGTGGCGCCTGCCGGAGGCCCATTGAAGGGCGAGTAGTGAATGCCATGGGCAAGCAATGGCATGTGGAGCATTTTGTTTGTGCCAAATGTGAAAAACCATTTCTTGGACATCGCCATTATGAGAGGAAGGGCTTGGCCTATTGTGAGACTCACTATAATCAGCTATTTGGTGATGTTTGTTTCCATTGCAACCGTGTCATAGAAGGTGACGTGGTCTCTGCCCTCAACAAGGCCTGGTGTGTGAGCTGCTTTGCCTGTTCCACTTGCAATACCAAACTAACACTCAAGAATAAATTTGTGGAGTTTGACATGAAACCAGTCTGTAAGAAGTGCTACGAGAAATTTCCTTTGGAGCTGAAGAAAAGACTTAAGAAACTATCTGAGACCTTAGGAAGGAAATAACTTTTGGTGTCTTTTTTCTCTTTCTTTTAACCAATATTACTTAACCTGATCCACCCTCATCTACTTTTGCTTAAAACTGTATCAAAGCATTAGAGAGAATGGTTCTCTTCATTTCTCTTTTCTCATTTAAAATGAAAGAACATGTTTATTTCCATGTAAAACACAGATGAAATCAGGACTTTCATTTCTTTAGCCATATTAGTAGTAGGCATTAATAGTATATAGCCAAAAAGCAAAACAAACAAAAAAAGTTGAAGGGTAGTTTTAATTAAGCCCTCCAAAATATAAATTTAACTCTTCAGAATTAAACACCCTGCTCTATGGACCAACagaagcacttgctgccaaacctagtggactccttgagaaagtatctgtggccatgtccatgtgggtcatgtggagcgagaactcactcccacagttgtcctctaagctccacagacggccgtggtgcattgcgctgacacacataATTCATAAACGTAATAAACAACCACTGTTCTAAAGAGTCAGCTCTTACATGACTCCCATTTTAAAGGACTCTAAGCTTTGCTTTCCTTTATAGCATAAGAAAATAATTTCCTATTCATATGCTGGGAGAGGAGATAAGTAAACTACCAAAATAGCTCCTATGTATAATCATGTGTTTATCCAGTTAGCACTGTAAAAGGAACATACATATTACTAAGAAGCAAAAAATTTTCAGAGTATTTTGATTTTTTTAATTAAATCACTATGCTTAATCTTCTATTTTGTTCTCCTTATAAATTTTTCCTTCATAAATTACTTAACATACTTATAGCTACTAATGAGTCTTTTACATTTTTTGAGCAAAACAAAACAAATTGTCAGGAAAATATTGCATACATTGTGATACTGATGAAATGAAGCATTTTAAAAATATATTACACAATTGTGCTTCTAAACTTAATGTAAAATGCATAGTATTCAAGTGGGACATGAAATGCACTATTATGCAGCTTGAAATGTATCGATTTCCAAAGTGAGTGTGagccgggtgcagcggcactaggcgtcgatcccggcactctggaggcagaggcaggcagatctctgagtcctaggccagccagggttgcggattaaaaccttgACCGTATCTCATATTACCTTTGTGCTAATATCTACATAATCTAACTTGCCTTAGAAAACTGCATCTTCTAATCAGGAATTCTAGATATTCCTATAATACCAAATTAAGTATTTTGACTGAGATTCATAAATTTAGAATCATTTGCCACTGATTAAAACTTTAAAAATTCTTTTCTCAGGAAGCCAATGAAAGTTAACTTCTATCCTATTATTAGAACTATGCAGATATATTAAAACATTTTAATGAAGGCTTTTTCATTTCAAATGTATAACTGGGTTTTATTTACTATAAAGTAATAAAACTATATAAATGATACTTTTAGATTGAAAGAGGGTAGTAAGAGTAGCAAATCCTAAGTTACAGTGTGAGATGCTATCTCCCAAAACATCCTCACAAACAAAAACACTAGTGTATCATTTCACCATAAAGAATAcctcaggagcctaggacaaaactcagtaatggagtcacaccagccttaggacctgagtttgaacttggagacaagttgttctctggatttacaaggtagccaactcagcctaactagcgagccccagatccaagggctcaatcctgtatcaaaaaaagcaaggtggatggctcctgaggaatgacagccaagactgacatctggcttccacatccacacacacatatgcacaCATTCAGAAATATAGATGTATACACAAAAAAGATATCTCAGGATGCTGTTACTCTGCCATTAAAAGTTTGCAATCGTGAATTTTTAAAATACTTGGTTATGCACATTGTAGAATACATTTCTGTTCATATAACTAACTTGTAACCAATCTTAATAGTCTTTCTTAATAGTCTTTGGGAATTAAGAGAGTCATAGGTGATTAAAATGTATATGCTTTGTATTTGTGTTTAGCATTTTAAATCTGTCTTTACTTCTGATAATAAGAACCCACATTTCTTCGGTGTGCCTTTGTCAGCTAAGAATGTCAAGCAGTGATTACCTTAAAAGTATTTATGAACTATTGTACGTGCATTTAGGCAAATAGAGTTTGTAGCCCAGGGTCCTGGTGCTAAATTCTTACATGCCTCACTAGAAGTATGGAGCAGAAAAGCAGGCGTTCCTGTGCTTTCCCCATCTCTTTAGATGTGCGTGGCCTTGCCTGACTGCCTTTGCTTGTGTGACATCACTTAGCCAGAGTCCCCACTGCTGGCTTTGCTCACTTCTCTTTAGACAATATTCCAGTAAGCTTGATCTCATAATTATGTAGTAATTCATCTAGAGATGGTGCCTTTCACTGTGGGGTATAACATTAGAGCCCTTAGTAAGGAAGGAGATGGAGGTCTAAATGGGGCCAAGACAAAGACTTTATCTAGTTCCTATTAATTGTAGGCTTTCACTGGCTGCTGGCATTTGTCATTGAACATCTCTGAGTTTCTGAGAACAATCTGAAGTAATTCATTGTGCTTATGAAATTTCTAAGTGCCCTTTTTGTCCTTAGTTACCATAATGTAACATGGAAAATGGATACACAAAAAATATTTTGTGTGTCATATTCAAAGCCTTATTAATACTTTGCCTGAAATAGGACATTTTGCCTCATTCATTTGCCAAAGTAGCCAATTCCAAAATAAGGAAACTTTGATGTGGGCTGACAATATTCTTGTGTTTTATTTTAGATTGTAAACTTGATGGTAAGAAATTATATCAATAATTGTGCTTTTTATGTACCAACCATTGCTGTGTACTTTTGGTGCTTAATAAATATTCATAATTATTATAGTGA