Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

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Summary

Gene Name Atpsckmt
Plot displaying the genomic locations of a parental gene (in chr2) and its retrocopy(ies). Each line represents a retrocopy.
Specie Rattus norvegicus
Full Name ATP synthase c subunit lysine N-methyltransferase
Also known as Fam173b|RGD1560629
Coordinate chr2:84678892-84694152
Strand +
Gene summary Predicted to enable protein-lysine N-methyltransferase activity. Predicted to be involved in peptidyl-lysine trimethylation; positive regulation of sensory perception of pain; and regulation of proton transport. Predicted to be located in mitochondrial crista. Predicted to be active in mitochondrion. Orthologous to human ATPSCKMT (ATP synthase c subunit lysine N-methyltransferase). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Atpsckmt

Retroname Coord Strand Genomic Region ENSG
Fam173bP1 chr10:64018970-64019175 - Intragenic
 N/A UCSC
Fam173bP2 chr16:3190150-3191206 - Intergenic
 N/A UCSC

Expression

Transcript Sequences

>NM_001109178.1
CCAAACTTAGAAGGCAGCGTCTAGAACACAAATGCAAATACTAGACCTAATCCAGTCACCGATTCAAGGATTTGGGTTTTGAATTTTTCTGAATGCAGAGTTGCAGCGGGGAGCTAATTTCCTTAAGACATTTTTCTTTTCCTTTATTGCCACCCCGCCTCTGAGACGTTGGTAGATTCCACTTCCGGTCTCCCCGGAAATTTCGCGCGATGGAAAGAGGAGAAACGCCTGAGGAAGAAAGGCAGTCGGGATGTGTTCTTCCTACAAGTCCGGAATCTGACAGTTTGAAGACAAGCAATTGGGGGTTCTTGATTACTGGGGTCATTGGTGGTGCCCTGGTGACAGTGTATGCTGTGACTACGCCATTTATCGCTCCAGCCCTCCGGAAAGTTTGTTTACCATTTGTACCTGCAACTTCGAGGCAGGTTGAAAATGTTGTCAAGATGTTGCAACACAGAAGAGGACCTCTGGTGGACATTGGCAGTGGTGATGGACGGATTGTGATTGCAGCTGCAAAGGCAGGCTTCCCAGCCGTCGGGTATGAACTGAATCCGTGGCTGGTTTGGTACTCCAGATACCGTGCTTGGAGGGAAGGCGTGCATGGCTCTGCCAAGTTTTACATTTCAGATCTATGGAAGGTCACCTTTGCACAGTACTCGAATGTCGTTATTTTTGGTGTGCCCCAGATGATGCCACAGCTGGAGAAGAAACTTGAGTTTGAACTTGAGGATGGTGCTAGAGTTATTGCCTGTCGGTTCCCTTTCCCACACTGGACTCCAGACCACACCACTGGAGAGGGTATCGACACTGTGTGGGCCTACGACATGAGTGCTTGTAGAACACAAGGAAAGAGGGCCTGATTGTGATCAGCTCGGCCAGTAGAACTTGGCAGAGACAGTGGACTGTGGGCTTCCTCATCTGAGACGCAGAGCCAGCTCCTTGACACTGAATGACAAGTCACCGCTGCTCTCCTTGAGAAAATGAACAGAAGCTCAGAGAAACATTTAAGTTTAAACTCTGCTGCtttttaaagggcagtttcacacagcctgggttggccttgagtttgctgatgaccttgaacttctgatccttccacttttacctccccagtAAAATGTGCTTTTAGTGGAACATTCTGGATGGGCTCACTACCTTTGCATATACTAGGGTGCATGAACATAAAAGTAAGTGACAGTCTGTGGGTAAGAAGACTGTCATCTCAGCAGCATGGTTTGATGGCTTGGGTGAAGAGGACGGGGCACTTATGCAAACATCTGCATTTCCTGTAGTTTTGTTCATGACTGAGATTTATCTCCTTTGTGTAGTTTGCAGTTAAATTAATTTTCTGTAAGATTCAGAGAGTGACATTTAGATT