Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name Tgif2
Plot displaying the genomic locations of a parental gene (in chr3) and its retrocopy(ies). Each line represents a retrocopy.
Specie Rattus norvegicus
Full Name TGFB-induced factor homeobox 2
Also known as RGD1560115|RGD1564927|Tgif2l1
Coordinate chr3:152906961-152924380
Strand +
Gene summary Predicted to enable DNA-binding transcription factor activity, RNA polymerase II-specific and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Predicted to be involved in negative regulation of transcription by RNA polymerase II. Predicted to act upstream of or within several processes, including nodal signaling pathway; positive regulation of neuron differentiation; and regulation of gastrulation. Predicted to be located in centrosome and nucleoplasm. Orthologous to several human genes including TGIF2-RAB5IF (TGIF2-RAB5IF readthrough). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Tgif2

Retroname Coord Strand Genomic Region ENSG
Tgif2P1 chr17:49516312-49519045 + Intergenic
N/A UCSC

Expression

Transcript Sequences

>NM_001134983.1
GAGGCGGGCGCGATGGGAGGAGAGGGGATCTGACGTCAGGTCGCGAGGTGCTTTCCAGCCGCGAGCTGTCAGGCGGGTGTCAGACCCGGCAGGTACCCGGCGCGTTCCCCCTGCGCCCCCCCGTCCCGGCCCGGTCGTCCCTCACCCCACAGAGGCCGCGTGGGCCGGAAAGCCGCCGGGGAAGGCTGCCCAGAGGTCCAGCTTAGTCCCCAAGCACCATGTCGGACAGCGATCTAGGCGAGGATGAAGGTCTTCTGTCACTGACTGGCAAGAGGAAGCGCAGGGGGAACCTGCCCAAGGAGTCAGTAAAGATTCTCCGAGACTGGCTGTATCTGCACCGCTACAACGCCTACCCCTCTGAGCAGGAGAAGCTAAGCCTCTCTGGACAGACCAACCTCTCCGTGCTGCAGATATGTAACTGGTTCATCAATGCCCGCCGCCGCCTTCTCCCTGACATGCTTCGGAAGGATGGCAAAGACCCTAATCAGTTCACCATCTCCCGGCGCGGGGGTAAGGCCTCAGATGTGGCTCTCCCCAGGGGCAGCAGCCCCTCTCTGCTGGCTGTGTCTGTTCCAGCCCCCACCAACATGCTCTCCTTGTCTGTGTGTTCCATGCCACTCCACTCAGGCCAAGGTGAAAAGCCAGCAGCGTCCTTCCCACAAGTGGAGCTGGAGTCCCCCAAGGCCCTGGTGACCCCTGGGAGCACACTCACCCTGCTGACTAGGGCAGAGGCTGGAAGCCCCACAGGTGGACTCTTCAATACGCCACCACCCACACCCCCAGAGCAGGACAAGGACGACTTCAGCAGCTTCCAGTTGCTGGTGGAGGTGGCGCTGCAGAGGGCTGCTGAGATGGAGCTTCAGAAGCAGCAAGATCCAGCGCCACCCTTACTACACACTCCGCTCCCTCTAGTCTCAGAAAATGCCAAGTAGGCACTGCTCCCAGGCGGCTTGAGGTCCAGGCCAGCTGTCCCAGGTTTCTGGTTCACTTCCCTTTCATACAGAGGGTTATCTATGTACGGATCACTGCCGAGCATCAGGATCATCTGTCCAGCGGGCCTCAGCAGAAAGAGGCCACTGATGTCGCTGCACTGCACCGGTAACAGGGCCTGTACTCTGCTGAGTGCCATTCCTTCAAGCGTCCTCTCCGAGGAGACCAAGGCACCAGAGCCAGGTGtggtgctgctgctgctgcttctCCAGAGAGCCCTGGGACACCTGCACTCCAGCCTGCTTTCTGACGCAGGCTCAGGAAACCTGCCAAGTTCAGACTTGAGCTGGGTCCAAGCCGCCCCTAAGCTGTGCCTCTTGGTCGAGCCAGGTGCACACATTCCAGCCTATTCAAAGGACAAAGGAAAATGCCCAGCAGATGTCACAGAACCGACTCCAGTTGAATGTTTAGATTTTTGCTAAATTGTTTTATTTTCCTTTTGCTGTGGTTTGTGTTAATGGCAGTAGGTAGCCCAGAAGCACAGGTGTGGGGAGAGAGCACCTTACGTGATGGATGGGGCTTGATGAATGGGGTAATCTACGGCTGCTCAGGATGACTGTATAAGGGACCAGCAGATTCTCTATAGTGCTGAATTCAGACTATGGTGATTGTTTAAGTCTTGGTTTGGTTTACCCTGTTATAAAAGACAGAAGGAAAATATCCACAGGTGGTGGATTATTTGCACCAGACACAGGCGGGGAATAAAGCCACAACCAAGTCCAAGCAAACCAGACAGCCATTTAGACACAGCAGAGACAGATGATAAAGTCAGAGACACACTTGTTTCTATTGTAGTTTGGGGTGGTTAAGCTAGACTGAAACAGTTTTGTTTTTCTCTCTGTTCTGGGTAGCTTGTTTCAGACTTATTCCAGCGTCTCCTGCTTGGGGAAGAGTGAGCCATCTGCTGGTCAGGAGGCCCTTCAGACATGCCGCTTGTTCCTTACCTAGGCAGTTGGAGCCTTCCTAGAGGAGAGGCTAGTGCGGCTACAGCCTGGCCCAGCCGCCTGGGAGCTGTGTCTGTTCACCTCCCTTCAAGTTGGGATTGCAAGGGGCCTGCCTAGATTTCCCGGGAAACAGACCACACTTGGTCTTAATCTTCCTTCCCCCTGTTTACTTTGCTTAGTTTTCAGCAGCACTGTACCCCATCTTTATATATCCTAAGAAACACTAACCCTAGGTTTTTATTAATCAAAATATTTGTGTTCTGAATAACCAGAAGATGTGAGGAGCCCTGACTGTAATTTCCTGGGGTCTACCAGGTTGTGCGCACAGATGGGGCTCTTGGATGTTGACTGACTTGGAGTGCCTGTCCCAGAGGAAGGCAGAAGACCACTCGCTCTGGCCTTTCTGGGAGCCCCTGATGTTTACCAGGCTTCCATACCTCTCCTGAGTGGCTGTGCCCCATTCGTTGCTGTGCAAGTGGAATGGGAGATTTGCTGTTTGTAGGGACTGCTCTCCTAGGCTGTCTCGTGCCCCCCTCTGGCTTCCTGTACTGCAGGAGACCCAGCAACCTCACCTGTGACCTGGAGGCACTCCTGGGAAGGGCATGGTGGGTTCACTGAGTTTGGTTTGCCCACTTCTACCCCACCTGTCTGAGAGCTCCCATGGCTGTGTAGGATGCTCCAGTAGGGGTGATACTAGGATGAGGGATTTTCCCCCCACAGTGCACTGAGCAGGGGGAGGAGGGAAGGAGCCATGCTGCTGACATATTCTGGCACCCCCTCCTGGAGTGAAACGGCGTCTGCAGGGTAGAGCAGTCTCTGCTTGTAAGATAAATCTGGAGAAGCGCAGTTGTCCCATTGAACAATATTTGAGCAAAAAAACTACTGTAAATAACTGGTTTTTGTCTTTTGTCAAATAAAATTGTTTTGGTTTTGTTTATGTTTAAAGTCAAA