Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

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Summary

Gene Name Tra2a
Plot displaying the genomic locations of a parental gene (in chr4) and its retrocopy(ies). Each line represents a retrocopy.
Specie Rattus norvegicus
Full Name transformer 2 alpha
Also known as RGD1562563
Coordinate chr4:78905380-78924203
Strand -
Gene summary Predicted to enable identical protein binding activity. Predicted to be involved in mRNA splicing, via spliceosome and positive regulation of mRNA splicing, via spliceosome. Predicted to be located in nucleolus and nucleoplasm. Predicted to be part of spliceosomal complex. Orthologous to human TRA2A (transformer 2 alpha homolog). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Tra2a

Retroname Coord Strand Genomic Region ENSG
Tra2aP2 chr6:116770797-116771792 - Intergenic
 N/A UCSC
Tra2aP3 chr6:65007279-65008153 - Intergenic
 N/A UCSC
Tra2aP1 chr5:9783766-9785539 - Intergenic
 N/A UCSC

Expression

Transcript Sequences

>NM_001126296.2
CCGGCGCCATTTTGCCCGAGCGTGCGAGCTAGTGGGAGTGGAACGCACCGGCCGTTGTAGCCGTCGCCTTCTTCCTCCCCACAGTCAAACAGCGCGGTGACTAGGCCGTCGGCCCTCGAGCCGAGACATATCTCTTGTTTAGTGCTCGGGAGCGCCTGGCCAACATGAGTGATGTAGAGGAGAACAACTTCGAGGGCAGAGAGTCTCGCTCTCAGTCAAAATCTCCAACGGGAACTCCTGCTCGTGTAAAATCAGAGAGCAGGTCAGGATCTCGTAGTCCATCAAGGGTTTCCAAACATTCTGAATCCCATTCTCGATCAAGATCAAAATCCAGGTCGAGGTCACGGAGGCATTCTCATAGACGCTACACGCGATCCAGGTCACACTCTCACAGAAGACGGTCGCGAAGTAGGTCCTATACACCAGAGTACAGGCGGAGGAGGAGCCGGAGCCACTCCCCCATGTCAAACCGCAGAAGGCACACTGGCAGCAGGGCAAACCCAGATCCTAACACTTGCCTGGGAGTATTTGGCCTCAGTCTGTATACAACAGAGAGAGATCTTCGTGAAGTTTTTTCTCGATATGGACCTCTGAGTGGTGTTAATGTGGTTTATGATCAGCGAACTGGGAGGTCACGCGGGTTTGCTTTTGTGTATTTTGAGAGGATAGATGACTCTAAGGAGGCTATGGAAAGAGCAAATGGGATGGAGCTGGATGGTAGAAGAATTCGTGTGGATTATTCTATCACCAAGAGAGCACACACACCTACACCAGGCATTTACATGGGCAGACCAACTCACAgtggtggtggaggtggcggaggaggaggtggtggcggcggtggtggtggaggtggtAGACGGCGAGATTCTTACTACGATAGAGGATATGATCGAGGCTATGACAGATATGAAGATTATGATTACCGGTACAGAAGAAGGTCGCCTTCTCCTTACTACAGTCGCTACAGGTCACGATCAAGATCCCGTTCCTATAGCCCAAGACGCTATTGATACCGGAGCGATTGTGCCCCAGGACTTTGCTTCCTCTTTTTGGTTTTTGGATTTCCAAGCTTCCAATGTTTCCTTTTAAAAACAAAAAACAAAAAAACCTGGTTTATTTAACCTCTGTGTGGCCAGTTGTGTTGCTGTTCTTCACCCTTTGTTAAACTCTTAAAGGTGTAATTGTCTTTTCAGTAGTTGAACATCTCGAGTAAAGGAGCACCATGCTGTGCTTTGTGGTTCTTCTTTGCCTTACAGAGGATTAACTTCTTACGATGAGGAAAGAAACCATCTTTTGAAAGCTTTTTCTGATGGACATTGTAGTAGACATTAGAAATCTGTGGTATGACAAACTGCTTTTTAATCTTCTTTGGCAGAAGACAACACTTTGGATAGGTCAGTCCTGTCAGGCTTGTCTGGAGTGGCATGGAGCAGTTGAATAGTTGAGTGTAGAAAGTTTGAAGCTCTAGGAGAAAATATGGGACATTTCTTTTGAAGAATATAACTTTGAACGTAAAAATTAAGTCACCTTTTAGAAATTAAAAGCTTGTAATTCCTATAAGACATGTTGTATTTGAATTTACATGTTAAACCTTATTATAAACTTAAAGTGTGATTTTTATGTTAAGTTTACGGAAACTTTATTCCCTTAATCACTGAAGGACAACCTTTATTTATTACCTAGAACAATTGTATAACTTGCTGTTAGAAATTTTGGTATTGGGACATTGGTTACATGGGTTATTGTATAGGATCCTAAATAATACATGTGGGGAAGAGTAATTTCAAATAAAAGTTAATTTGAAAATGGGATTGTCTCTTTGATAACAGTGGAAAATACATATTTTATATACAA
>XM_017592791.1
CACCAGGAGGTTTCTGGCGGTACCGGCGCCATTTTGCCCGAGCGTGCGAGCTAGTGGGAGTGGAACGCACCGGCCGTTGTAGCCGTCGCCTTCTTCCTCCCCACAGTCAAACAGCGCGGTGACTAGGCCGTCGGCCCTCGAGCCGAGACATATCTCTTGTTTAGTGCTCGGGAGCGCCTGGCCAACATGAGTGATGTAGAGGAGAACAACTTCGAGGGCAGAGTTAATGTTCGTGAAGAAATTGAAGAGTTTTTTCCAAGAATGTGGAAGATAAATCAAGATAAAAGAAGGCTAATGAAAAGTATTAAAGATCAGAAAATTAAAATTGAATGGGGGAAAAAATTGAACAGAAGATTGGTCAGATAGAAGCACTTGAATATTTTTTTTAAGGCTATTTTGAATTGTTTGAATTGGGGAAGAATACACgaagtatgaaaaatgaaaaactcaatgaagaatgaagagaagtagaaagcaagagtgaagtagaattaaaagaatctggaagaatgaaTGGGTCCTAGGTTAAGTAAATGTATGGTTTATGTTCCAGTGTCTGTATGATCAAGTTGTAGATGAATTTGCATGATTACTTAGTTAATAGAAAATTGGTGATCTGGTTCAAGTAGGGAATTACTGAGGACAGTTAGCAGTATTAACAATGGGATATTAATGAGCTGAAATTTTTTTCTGGAGGGTATTGCCTAACCATTTGTTTTTCAGGAGCAATCAATATAAATAATTACCGTACTTTAAATGTTAGGTGTTAGGCATCTGCATGACCAGTGCCATTTGTAATACTGTCTTCTTTGTTAGGAGTCTCGCTCTCAGTCAAAATCTCCAACGGGAACTCCTGCTCGTGTAAAATCAGAGAGCAGGTCAGGATCTCGTAGTCCATCAAGGGTTTCCAAACATTCTGAATCCCATTCTCGATCAAGATCAAAATCCAGGTCGAGGTCACGGAGGCATTCTCATAGACGCTACACGCGATCCAGGTCACACTCTCACAGAAGACGGTCGCGAAGTAGGTCCTATACACCAGAGTACAGGCGGAGGAGGAGCCGGAGCCACTCCCCCATGTCAAACCGCAGAAGGCACACTGGCAGCAGGGCAAACCCAGATCCTAACACTTGCCTGGGAGTATTTGGCCTCAGTCTGTATACAACAGAGAGAGATCTTCGTGAAGTTTTTTCTCGATATGGACCTCTGAGTGGTGTTAATGTGGTTTATGATCAGCGAACTGGGAGGTCACGCGGGTTTGCTTTTGTGTATTTTGAGAGGATAGATGACTCTAAGGAGGCTATGGAAAGAGCAAATGGGATGGAGCTGGATGGTAGAAGAATTCGTGTGGATTATTCTATCACCAAGAGAGCACACACACCTACACCAGGCATTTACATGGGCAGACCAACTCACAgtggtggtggaggtggcggaggaggaggtggtggcggcggtggtggtggaggtggtAGACGGCGAGATTCTTACTACGATAGAGGATATGATCGAGGCTATGACAGATATGAAGATTATGATTACCGGTACAGAAGAAGGTCGCCTTCTCCTTACTACAGTCGCTACAGGTCACGATCAAGATCCCGTTCCTATAGCCCAAGACGCTATTGATACCGGAGCGATTGTGCCCCAGGACTTTGCTTCCTCTTTTTGGTTTTTGGATTTCCAAGCTTCCAATGTTTCCTTTTAAAAACAAAAAACAAAAAAACCTGGTTTATTTAACCTCTGTGTGGCCAGTTGTGTTGCTGTTCTTCACCCTTTGTTAAACTCTTAAAGGTGTAATTGTCTTTTCAGTAGTTGAACATCTCGAGTAAAGGAGCACCATGCTGTGCTTTGTGGTTCTTCTTTGCCTTACAGAGGATTAACTTCTTACGATGAGGAAAGAAACCATCTTTTGAAAGCTTTTTCTGATGGACATTGTAGTAGACATTAGAAATCTGTGGTATGACAAACTGCTTTTTAATCTTCTTTGGCAGAAGACAACACTTTGGATAGGTCAGTCCTGTCAGGCTTGTCTGGAGTGGCATGGAGCAGTTGAATAGTTGAGTGTAGAAAGTTTGAAGCTCTAGGAGAAAATATGGGACATTTCTTTTGAAGAATATAACTTTGAACGTAAAAATTAAGTCACCTTTTAGAAATTAAAAGCTTGTAATTCCTATAAGACATGTTGTATTTGAATTTACATGTTAAACCTTATTATAAACTTAAAGTGTGATTTTTATGTTAAGTTTACGGAAACTTTATTCCCTTAATCACTGAAGGACAACCTTTATTTATTACCTAGAACAATTGTATAACTTGCTGTTAGAAATTTTGGTATTGGGACATTGGTTACATGGGTTATTGTATAGGATCCTAAATAATACATGTGGGGAAGAGTAATTTCAAATAAAAGTTAATTTGAAAATGGGA