Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name Ybx1
Plot displaying the genomic locations of a parental gene (in chr5) and its retrocopy(ies). Each line represents a retrocopy.
Specie Rattus norvegicus
Full Name Y box binding protein 1
Also known as Byb1|Cbfa|Dbpb|Ef1a|Msy1|Nsep1|Yb1
Coordinate chr5:138319754-138336721
Strand -
Gene summary Enables nucleic acid binding activity and p53 binding activity. Involved in several processes, including negative regulation of apoptotic process; negative regulation of insulin receptor signaling pathway; and regulation of transcription by RNA polymerase II. Located in several cellular components, including dendrite; neuronal cell body; and perinuclear region of cytoplasm. Part of messenger ribonucleoprotein complex. Biomarker of myocardial infarction. Orthologous to human YBX1 (Y-box binding protein 1). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Ybx1

Retroname Coord Strand Genomic Region ENSG
Ybx1P1 chr1:108010686-108011959 - Intergenic
N/A UCSC
Ybx1P2 chr1:109091918-109093310 + Intergenic
N/A UCSC
Ybx1P3 chr1:112085731-112086355 - Intergenic
N/A UCSC
Ybx1P4 chr1:186635074-186636441 - Intergenic
N/A UCSC
Ybx1P5 chr1:281924990-281925388 - Intergenic
N/A UCSC
Ybx1P6 chr1:81602470-81603961 - Intergenic
N/A UCSC
Ybx1P7 chr1:82957769-82959260 - Intergenic
N/A UCSC
Ybx1P8 chr2:13666330-13666806 + Intragenic
N/A UCSC
Ybx1P9 chr3:148883693-148884673 - Intragenic
N/A UCSC
Ybx1P10 chr3:55355441-55356710 + Intergenic
N/A UCSC
Ybx1P12 chr5:6705542-6706854 + Intergenic
N/A UCSC
Ybx1P13 chr6:132652786-132654051 + Intergenic
N/A UCSC
Ybx1P14 chr6:37143417-37143635 - Intergenic
N/A UCSC
Ybx1P15 chr6:40687475-40688440 + Intergenic
N/A UCSC
Ybx1P16 chr7:24215823-24217093 + Intragenic
N/A UCSC
Ybx1P17 chr8:86362241-86367787 - Intergenic
N/A UCSC
Ybx1P18 chr9:119685573-119686952 + Intragenic
N/A UCSC
Ybx1P19 chr10:40380379-40381886 - Intergenic
N/A UCSC
Ybx1P21 chr11:12726822-12727891 + Intergenic
N/A UCSC
Ybx1P22 chr13:62289114-62289290 - Intergenic
N/A UCSC
Ybx1P23 chr14:114776787-114777355 + Intergenic
N/A UCSC
Ybx1P24 chr14:17010059-17011621 - Intragenic
N/A UCSC
Ybx1P25 chr17:53564951-53566230 + Intragenic
N/A UCSC
Ybx1P27 chrX:28544350-28545590 + Intragenic
N/A UCSC
Ybx1P11 chr4:117379641-117380760 + Intragenic
N/A UCSC
Ybx1P20 chr10:43841396-43843335 - Intergenic
N/A UCSC
Ybx1P26 chr19:20845187-20846707 + Intergenic
N/A UCSC

Expression

Transcript Sequences

>NM_031563.3
CGGGAGCGGAGAGCGGACCCCAGAGAGCCCTGAGAGCCCCACCGCCGCCGCCGGCCTAGTCACCATCACACCCGGGAGGAgccgcagccgtcgccgccggccccagtcaccatcaccgcaaccatgagcagcgaggccgagacccagcagccgcccgccgcccccgccgccgccctcagcgccgccgACACCAAGCCCGGCTCCACGGGCAGCGGCGCGGGTAGTGGCGGCCCGGGCGGCCTCACATCGGCGGCGCCCGCCGGCGGGGACAAGAAGGTCATCGCAACGAAGGTTTTGGGAACAGTAAAATGGTTCAATGTAAGGAACGGATACGGTTTCATCAACAGGAATGACACCAAGGAAGACGTATTTGTACACCAGACGGCCATAAAGAAGAATAACCCCAGGAAGTACCTTCGCAGTGTAGGAGATGGAGAGACTGTGGAGTTTGATGTTGTTGAAGGAGAAAAGGGTGCGGAGGCAGCTAATGTTACAGGCCCTGGTGGAGTTCCAGTTCAAGGCAGTAAATACGCAGCAGACCGTAACCATTATAGACGCTATCCACGTCGTAGGGGTCCTCCACGCAATTACCAGCAAAATTACCAGAATAGTGAGAGTGGGGAAAAGAATGAAGGATCGGAAAGCGCTCCTGAAGGCCAGGCCCAACAACGCCGGCCCTATCGCAGGCGAAGGTTCCCACCTTACTACATGCGGAGACCCTATGCGCGTCGACCACAGTATTCCAACCCCCCTGTGCAAGGAGAAGTGATGGAGGGTGCTGACAACCAGGGTGCAGGAGAGCAAGGTAGACCAGTGAGACAGAATATGTATCGGGGTTACAGACCACGATTCCGCAGGGGCCCTCCTCGCCAAAGACAGCCTAGAGAGGATGGCAATGAAGAGGACAAAGAAAATCAAGGAGATGAGACCCAAGGTCAGCAGCCACCTCAACGTCGGTATCGCCGCAACTTCAATTACCGACGCAGACGCCCAGAGAACCCTAAACCACAAGATGGCAAAGAGACAAAAGCAGCCGATCCACCAGCTGAGAATTCGTCCGCTCCCGAGGCTGAGCAGGGCGGGGCTGAGTAAATGCCGGCTTACCATCTCTACCATCATCCGGTTTGGTCATCCAACAAGAAGAAATGAATATGAAATTCCAGCAATAAGAAATGAACAAAGATTGGAGCTGAAGACCTTAAGTGCTTGCTTTTTGCCCGTTGACCAGATCCACTAGAACTGTCTGCATTATCTATGCAGCATGGGGTTTTTATTATTTTTACCTAAAGATGTCTCTTTTTGGTAATGACAAACGTGTTTTTTAAGAAAAAAAAAAAAGGCCTGGTTTTTCTCAATACACCTTTAACGGTTTTTAAATTGTTTCATATCTGGTCAAGTTGAGATTTTTAAGAACTTCATTTTTAATTTGTAATAAAGTTTACAACTTGATTTTTTCAAAAAAGTCAACAAACTGCAAGCACCTGTTAATAAAGGTCTTAAATAATA
>XM_008764058.2
AGCTGTGGGTCGGGCGAATTAGTCGCTAAAGGTACCAATGAGAGCACAGGAGCCGCGCAGCGTGAGCCAATAGGTGCTAGAGACCCGGTCAGGTGGTGAGATGGACAACGATGTAGGCCAATGGGAGAGGACGAGGGCGGGTCTACCGCGGGGCTTATCCCGCCCGTCCCGCCATTCTCGCTAGTTCGATCGGTAGCGGGAGCGGAGAGCGGACCCCAGAGAGCCCTGAGAGCCCCACCGCCGCCGCCGGCCTAGTCACCATCACACCCGGGAGGAgccgcagccgtcgccgccggccccagtcaccatcaccgcaaccatgagcagcgaggccgagacccagcagccgcccgccgcccccgccgccgccctcagcgccgccgACACCAAGCCCGGCTCCACGGGCAGCGGCGCGGGTAGTGGCGGCCCGGGCGGCCTCACATCGGCGGCGCCCGCCGGCGGGGACAAGAAGGTCATCGCAACGAAGGTTTTGGGAACAGTAAAATGGTTCAATGTAAGGAACGGATACGGTTTCATCAACAGGAATGACACCAAGGAAGACGTATTTGTACACCAGACGGCCATAAAGAAGAATAACCCCAGGAAGTACCTTCGCAGTGTAGGAGATGGAGAGACTGTGGAGTTTGATGTTGTTGAAGGAGAAAAGGGTGCGGAGGCAGCTAATGTTACAGGCCCTGGTGGAGTTCCAGTTCAAGGCAGTAAATACGCAGCAGACCGTAACCATTATAGACGCTATCCACGTCGTAGGGGTCCTCCACGCAATTACCAGCAAAATTACCAGAATAGTGAGAGTGGGGAAAAGAATGAAGGATCGGAAAGCGCTCCTGAAGGCCAGGCCCAACAACGCCGGCCCTATCGCAGGCGAAGGTTCCCACCTTACTACATGCGGAGACCCTATGCGCGTCGACCACAGTATTCCAACCCCCCTGTGCAAGGAGAAGTGATGGAGGGTGCTGACAACCAGGGTGCAGGAGAGCAAGGTAGACCAGTGAGACAGAATATGTATCGGGGTTACAGACCACGATTCCGCAGTGTTCATTTCAGGGGCCCTCCTCGCCAAAGACAGCCTAGAGAGGATGGCAATGAAGAGGACAAAGAAAATCAAGGAGATGAGACCCAAGGTCAGCAGCCACCTCAACGTCGGTATCGCCGCAACTTCAATTACCGACGCAGACGCCCAGAGAACCCTAAACCACAAGATGGCAAAGAGACAAAAGCAGCCGATCCACCAGCTGAGAATTCGTCCGCTCCCGAGGCTGAGCAGGGCGGGGCTGAGTAAATGCCGGCTTACCATCTCTACCATCATCCGGTTTGGTCATCCAACAAGAAGAAATGAATATGAAATTCCAGCAATAAGAAATGAACAAAGATTGGAGCTGAAGACCTTAAGTGCTTGCTTTTTGCCCGTTGACCAGATCCACTAGAACTGTCTGCATTATCTATGCAGCATGGGGTTTTTATTATTTTTACCTAAAGATGTCTCTTTTTGGTAATGACAAACGTGTTTTTTAAGAAAAAAAAAAAAGGCCTGGTTTTTCTCAATACACCTTTAACGGTTTTTAAATTGTTTCATATCTGGTCAAGTTGAGATTTTTAAGAACTTCATTTTTAATTTGTAATAAAGTTTACAACTTGATTTTTTCAAAAAAGTCAACAAACTGCAAGCACCTGTTAATAAAGGTCTTAAATAATA