Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name Lin28a
Plot displaying the genomic locations of a parental gene (in chr5) and its retrocopy(ies). Each line represents a retrocopy.
Specie Rattus norvegicus
Full Name lin-28 homolog A
Also known as Lin28|RGD1566408
Coordinate chr5:152230343-152247873
Strand -
Gene summary Predicted to enable RNA binding activity; polysome binding activity; and translation initiation factor binding activity. Predicted to be involved in several processes, including RNA metabolic process; positive regulation of intracellular signal transduction; and regulation of translation. Predicted to act upstream of or within several processes, including miRNA metabolic process; negative regulation of glial cell differentiation; and regulation of gene expression. Predicted to be located in several cellular components, including cytoplasmic ribonucleoprotein granule; nucleolus; and rough endoplasmic reticulum. Predicted to be part of polysome. Orthologous to human LIN28A (lin-28 homolog A). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Lin28a

Retroname Coord Strand Genomic Region ENSG
Lin28aP1 chr4:96995033-96996490 - Intergenic
N/A UCSC

Expression

Transcript Sequences

>NM_001109269.1
CCTTTGCCTCCGGACTTCTCTGGGGCCAGCAGCCGCCCGACCTGGGGCCCGGGGCCACGGGCTCAGCCGACGACCATGGGCTCGGTGTCCAACCAGCAGTTTGCAGGTGGCTGCGCCAAGGCAGCGGAGAAGGCGCCAGAAGAGGCGCCGGCTGACGCGGCCCGAGCGGCAGACGAGCCGCAGCTGCTGCACGGGGCCGGCATCTGTAAGTGGTTCAACGTGCGCATGGGGTTCGGCTTCCTGTCTATGACCGCCCGTGCCGGGGTCGCGCTCGACCCCCCGGTGGACGTCTTTGTGCACCAGAGCAAGCTGCACATGGAAGGTTTCCGAAGCCTCAAGGAGGGTGAGGCAGTGGAGTTCACCTTTAAGAAGTCTGCCAAGGGTCTAGAGTCCATCCGCGTCACTGGCCCTGGTGGCGTGTTCTGTATTGGGAGTGAGCGACGGCCAAAGGGGAAGAGCATGCAGAAACGAAGATCCAAAGGAGACAGGTGCTACAACTGTGGTGGGCTAGACCACCATGCCAAGGAATGCAAGCTGCCACCCCAGCCCAAGAAGTGCCACTTTTGCCAAAGCATCAGCCATATGGTGGCCTCATGTCCACTGAAGGCCCAGCAGGGCCCCAGTTCTCAGGGAAAACCTGTCTACTTCCGGGAGGAGGAAGAAGAGATCCACAGCCCTACCCTGCTCCCAGAAGCCCAGAATTGAGGCCCAGGAGTAGGGGTTATTCTTTGGCTAATGGGGAGTTTCAGGGAGGAGGCATCAATCCGCAGAGTGGAGAAAGTGGGAATCGGGTGGGTTGCGTGGGTAGCTTGCACTGTCATATGACATCTCAGGCCGGGGTTCCCAGTGTCACCCTGTCTTTCCTTGGAGGGAAGGAAAGGGTGAGGCAAAGGAACTCCTACCACGCTCCATCTAGAAGCAAGTGAAAGCTTTTGTGGGGAACCACCCTAGAATCTGCATGCTTTATCTGAGGCTCTAATGGGCTCTGCTGAGTGGCTGTTACAGGGGAGAAGCCCTTCTGTAGAAGGCTGTGTGACAGTTCCCTTGCTAGACAGGATGTGAAACAAGTGTCAAACCAAGATTAATGAACCTAACCCTCCAGCTTCTATGTTCTGTAGAAGAGACTCTCAGGTTATTTCCACAGGGCGCTTCCTCATAACCCAGTCCTGCCATGCTGTGCTGGGAAGAGTCCCTAGCAACGGGTTGTGATCACAGGCAAAGAGGGTGGTTGGGGGGACAACTGCAGACCTGCTGCTCCCACCTCACTCCCAGCCCTTTCTGGGCCAATGGGATTTTAATTTATTTGCTCCCTTGGGTAACTGCACCTTGGGTCCCACTTTCTCCAGGATGCCAACTGCACTATCTATGTGCGAATGACGTATCTTGTGCGTTTTTTTTTCCTTAATATAAATATTGGGTTTGTATTTTTGTATATTTTAATCTTAAGGCCCTCATTCCTGCACTGTGTTCTCAGGTACATGAGCAATCTCAGGGATAAGTCCGTAGCAGCTCCAGGTCTGCACAGCAGGAATACTTAACTTTGTTTTGATCACCATGGAGACCAACCATTTGGAGTGCACAGCCTGTTGAACTACCTCATTTTTGCCGATTACAGCTGCCTTTTCTGCCATAGCGTCCTTGAAAAATGTCTCACAGGTTTTGATTGAGCTGCCCCGAGACTTGATCTGGTTTTGGCAAAACATAGGAAATCAGTCTAAACCGGAAAGGGTGGTACAGAGACATTAAAAAGCCGGGCCAgggattggggatttagctcagtggtagagcgcttgcctaggaagcgcaaggccctgggttaggtccccagctctggaaaaaaaagaaCCaaaaaaaaaaaaaaaaaaaaaaaaaGCTGGGCCAGTGAAAGGCGCAAGAGTAACTTTCCATACCAAATTCATCCTTTTGCCAGATTAATCTAAGCCTGCCATGCACAGCAGGgtgtgtttgtgtgtgtgtatgtTGATTTTTTTTCAATGCAAATTTATGAGGAAGAGGtgtttttttattgtttgattgctttttttatactggggattgaaccatgggcttcatttatgctaggaagtaccctgccactgagttaTCCTGGTAAGGATGCAATTTAAGACCAATATCTTATTCCCACATTGTGCTGTCCAGGTATGGGAACATGAGGCAAGGACTCAAATCCTTAGCCTTTCACAATCTTGGCTTCCAGAGAGACTCAACGAGTGTGGGCCTCTGTGGCAAGTGTCCTGCCCTGCTGTAGTGTGATGGTTGATAGCTAACGAGGGGGGGGGGGTAAAGTTTCGTTTACGTACTTAGAGATCACCACAAACCTACCTCACTGTGTTGAAACGGGACAAATGCAATAGAACACATTGGGAGGTGTGTGTGTGTCTGATCCTGGTTTCTTGTTTCCCCCAAATGCTGCCCCCACCCCTAGTTAATTGTATTCGTCTGGCCTTTGTAGGACTTTACTGTCTGAGTTGGTGACTGCTAGGTGGTCTAGTTGTGTAAATATAAATGTGTTGGTCTTCATGTTCTTTTGGGGTTTTATTGTTTACAAAACTTTTGTCGTATTGAGAGAAAAATAGGCAAAGCATCTTTGACAGAAAGTTCTGCACCAGACTACACCATCTGAAACCGAAATGTGGGGTCCTCTTCCCAAAGTGAGCATCTGGGAACCAATGGCTTTCCCTCCTGTGATCCTTCTGTCTCCCACTCTGGACCACAATGACCTTACAACCAGCCCCTCTTCTCCCTCATAAGAAAACTCAGGCTCAGTTACTTCTTTGAGCTTCTCTACAGCTTTTGAAAGACCTATGTAAAAGTTCTGAAGAAGCCATGAACTTCATACTCTCTCCCCCTTGTTCCCTAACTCAGTGAGGAGTTTTGGTTGGTGCTTTTGAGACCGGGTCTCAGGTTCCTGGCTATCCTCCGGCCTCAGACTCCTCTGTGCAGGGACTGCAGGTGAGCCCCTTCTCCCTGGCAAGACCATTTCATGGTGTGATTTACCTTTGGACAGATCCAACCAACGTAATCTGTCACCCTTAGGTAGAGAGAAGCAGTTGTGGGGCCTTCCATGTAGAAGGTGGAATTCAAAGTTCAGGAAGGGACTATGAATGTACGTAAAGTTGAGACACTCAGGAACTTAATGCCGGTGCAAGAAACTTATGTCAAAGTGGCCACAAGATTGTTACTAGGAGACGGACGAATGTATCTCCATGTTTACTGCTAGAAACCAAAGCTTTGTGAGAAATCTTGAATTTATGGGGAGGGTGGGAAAGTGTGTACTTGCCTGTCCTTTCCCTGATATCTTTCCTGAACTGCAGGAGACTAAGCCCCCTGGGGCTTTGGTGACCCCACCCCTGGGGTGTTTTATTTCATGGTTGAGTTTTGCTGTCCCCGGGTACTTATATTCCTATCGTATAATCATTTTGTAACACATGCTGACTTTACCTTCCCTTCTCTTCCCTGGGAAAAATAAAGACTTATTGGTACTCCAAAATTGGTACTG