Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name Smim1
Plot displaying the genomic locations of a parental gene (in chr5) and its retrocopy(ies). Each line represents a retrocopy.
Specie Rattus norvegicus
Full Name small integral membrane protein 1 (Vel blood group)
Also known as RGD1564257
Coordinate chr5:171306836-171312109
Strand -
Gene summary Predicted to enable protein homodimerization activity. Predicted to be located in cell surface and plasma membrane. Orthologous to human SMIM1 (small integral membrane protein 1 (Vel blood group)). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Smim1

Retroname Coord Strand Genomic Region ENSG
Smim1P1 chr3:4268521-4268820 + Intergenic
N/A UCSC
Smim1P2 chr4:32309068-32309383 + Intergenic
N/A UCSC

Expression

Transcript Sequences

>XM_006239508.3
ccgcccttcagaccctgccccctcccccgcctcggccccgcccccgTCACCCCAGGGGGCTGGAGACGAGTCCCTGGCTTGCGAGCGGCCCTAGCAAGAGGCACAGGCTCGAGGGACCAACCTTACCTCACATCCTGGCTTGCCCTGCTGGGGAAAGGTGGGGTCCGCTGGCCAGACCCTGACAACCTTCCCGAGCCCCGGAGGTTTCAGCCCTACCACGACTCGCTTTTATTAGGGTGAAGGAAGCCTAGACGAGCCTGGTCCAAGGACCTCCCTGCTTTCTGGCGGCCTGTTCAGCCAAAGACAGTCGACAAATAACAGGATTCCACTGCTTCAGGCTTGAACAAACGGGGGAGACTCTCCTCATAACCCAGTCTACAAGTGGGCAGACCCTCCCTTAGCGGGAGCTTCTGTGAGTCTGATCTGATACCTGCCTCATCTCCATTGTGAATTGCTGTAGCTCCACCCCAGGCCTACAGCATGCAGTCCCAGGAGAGTGGCGTTCACTACAGCAGGTGGGACAGCAGCAGCCGGGATGAAGTCAGCATGTCCGCCATGTCCAGCTCAGAGGAGGCCTCATGCTATAAGAGGATCTCCCAGAAGCTGTGCTCTGGCAAGCTGGGGATAGCCATGAAGGTGCTGGGTGGAGTGGCCCTCTTCTGGATCATCTTCATCTTGGGCTACATCACTGGCTACTACGTGCACAAGTGCAAATAAATGCTGGCCCACTCCCATCCCGGGGGATTCCCTCTCATGTACACAGACATCTGTGCAGACCCTCATCCATACAGACCCCAGAGCATATGAAGACGCCAGTGTGCACTGTCAACATGGCTCCCCACCTCCAGCATCCACGGTGGACCCAAGACTGAAACCCTAGCCCGGGCAGCCACCAGAGGCACACAGGCTGGAGACTAGGCTCGGCTCCAGCAGGGCAGCAGGGGACCTCCCCAGGCTCAGCTCTGCACCCAGGATGCCCAGATCCTTTGGCCGATGCTAGGTGGTATCTTCCCCAGCCTAGGGCGTAGCCCCATCTATAGCTGAGGTTGGGATGAGGGGTTTGGGCAGAGGCGTGCGTGGCAGCCCTCAGGGGTGAGCTTCTCCCTGTGGGCTGGGCTCCTGGTTTGTTAGGCTTTCCAGATTCCTGATTGTGCAGGGAGAGCCCTGAATGATGATTGTAGCTCTTACCTATTTTTTCCAGGGGACACGGACAGAGCCACAGAGACAGGACCTTTCTGTGCAGGGCTCAAGAGAGGTCTTCTCATCTCAAACACAACATTGCTTTCTTTAACAAACAGGGCATGCACTCCATGGCTTACCACCTCAGGAATGGCCCTGTGAGAAGCTGGGTGCCCTATCGGCTGCCTCCCCACCAGCCCCCACTCACGGAGAGTAGACAAATCACTGCTGAAGAGCAGTGGGTGACAGTGCTGTCCAGCCAGGCGTGACTTGTTCCAGGCCTGACCCTCCTCCACAGCTCCTCCTGGTCTTGGAATGTGCCCCTCCTGGCTGGCCCTCTCCCAAGAACACAGAGGGCCCAAGGGTCAGGATGTGGCTGGACCTGTTCCCTCCTTACTGGACCACGTGAGGACGAGGCCCTGAACACTTAAGGGTACTGTGGCTTGATGGGGACTTTGGTCCCCTCTCCAGTGGCCTAGGTAGGACTTTCCTGGATCACACCTTGCTCCCAGGGAGATGGTGCCAGGCTTGCAGGCTGTGACCTGAGGGTGGAGGGCACAGCGGCTGCACCCATCAGTAGCCAGAGAAGGGAGGCCAGAGGTCAACCCCTGTCGCTCCCTGGCCAGAGAGGCTGGTATGGCTGGCCTCCTCATCTCAAGGGGTTCCTGGTTTGGACTGTCGTAAGCTTCAGTGGTCCTCGTGTGGGAGTTGGCAGTGGAACTACTCCAACTGGCCTGGACCTCTGTAGAAATCTGGGCTTCAAGTCTAAGACTGCTCTGCCCCCACTCACAAATGAGGTAGCCTGAGCTACCTCAAGGCAGGCATTGTGGAGAGGTCCCGGCAATGGACCCCTTAAGGCCTAGTGGAGCCCTTGTCAAGAGGCAGTCCTTGGAGCAGGAGCAGATGTATGGTGGGACAGGGAGAAGGTGTGTTCCATGCAAGGGGCAGAACGTGAAAGGAAAGGGAGTGTTCCGAGTCTCCTACAGTCCTGTACTCCTGGGCTGACAGCCACAGGCAGGCATCTAGCCACATCCTGTACCCCACAGGGTCAGGTGCTTCCAGTCCACTCCTGGCAACTGTGCAGTAACCTTTGGGGAGCTGCTCAGTGACCCCAGGGTCATCAACACCCCGGTGGAGGTTCAGGCTGCTTTCCTATGTATGGTGTCTGCTACACCAGAGGACTGGTGGACTGAACACTGTCCCTGGGAGACGCACATGCTAAGGCTGCTAATGCAGGGATTGTTACCAAGGGTTTTTTATTAGTTTTATTAGAACAAAGAGGCattctgcttgcaatgtaaaaacagttccaaaaatctcaatgagtctcacaccggggctgtgctggatggaggtTTGGGAGAGCAGGAACTGGGGAGAAACAGGGTGGGCACAGGGCAGCTCCACCCTAAACGCTTAGGTAAGTTTTTGCCACAACCACCAGCTTTGTCCAGGGTCTGCCATGAGGGGCCTGGAGCCTCACTAGATCTGGCAGCTAAAGGCTCTCGCATACCCTTAGAACAGAATAGAACCCGGAAACAACCCCAACAGTCGTTCTTTTACAGAAGATAGAAATTGTCCTTTGAGGTCAGAGACCACCACTGAGGTCTGGTAAGGCATGGGGCCACCAAGTCCTTTCTGCAGCTGGCTGGGTCCTTAGGATCAAGCACTGTGGCTCCAGGAATGGCAGCTGTGTGCTGGGTACACACCAGCACATGCACAGAGAGACAGGCTGTGTTGAGCCTGCAGGGCCTGGTGGGCGGCACTCCTTCCTCAGCTACCGTATGACAGTCCACACACCAGCCTTCCCACCCACTCACAGACCACTGGCTGGCTACACAGGACTACATGGGCATGGCTGACTTCTGTGGCCCCGGCACAGATGTGCCAACAATGACCAGCACTCCAGTTGGAAGCACAGCTGTGGAAGGCAGATGCTGCCCGAGGACCATGGCAGCAGCACTGTGCCCAGAAACAAGCTCTAAGACTATGATCACAACATGATGCTCTCAACTGTCTTTGCACAGCTGATGTTGAAAAAAAATGCTATTAACATGTTGTAGAAAAATAAATACCGTTCAATAGA