Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

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Summary

Gene Name Sptssa
Plot displaying the genomic locations of a parental gene (in chr6) and its retrocopy(ies). Each line represents a retrocopy.
Specie Rattus norvegicus
Full Name serine palmitoyltransferase, small subunit A
Also known as Ssspta
Coordinate chr6:75540132-75551545
Strand -
Gene summary Predicted to contribute to serine C-palmitoyltransferase activity. Predicted to be involved in ceramide biosynthetic process and protein localization. Predicted to be located in endoplasmic reticulum. Predicted to be part of serine C-palmitoyltransferase complex. Orthologous to human SPTSSA (serine palmitoyltransferase small subunit A). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Sptssa

Retroname Coord Strand Genomic Region ENSG
SptssaP1 chr6:44150557-44150968 + Intergenic
 N/A UCSC
SptssaP2 chr6:50505344-50507069 + Intergenic
 N/A UCSC

Expression

Transcript Sequences

>NM_001047743.1
CGCGGGAGGCGCATGGCGGGCATGGCGTTGGCGCGAGCATGGAAGCAGATGTCCTGGTTCTACTACCAGTACTTGCTGGTCACTGCGCTCTACATGCTGGAGCCCTGGGAGCGAACCGTGTTCAATTCGATGCTGGTTTCTGTGGTGGGGATGGCACTGTACACCGGCTACGTCTTCATGCCCCAGCACATCATGGCAATACTGCATTACTTTGAAATTGTACAGTGACGGAGATGTGACCAGGATCCAGAGGCTCCTGGGGAAGATCCACCTTGTGAAGTTGGGACGAGACCTCGTCACATGTGAGATGCTCTACGGATGTCAACATAACCAACCTTATAAATACAGAGACTAAACTTCATGAGTAGAACAGGAGAAATCATCCTGACTCATGTGTTGTGTTCCTTCCTTTTGATTTTAAAAGAGGCTCTTACATAGTAGCTTTTATCTATTTTAACATTGTAGTCATTTGTACTTTGATATCAGTATTTTCTTAACCTTTGTGACTGTTTCAATATTACCCAGTGAAAGCTTTTCTTAATGTAACTTTGAGTACATCTTAACTGCCTTCTATTTTTAAAACCTAAGGTCGTTAGTTGGGCTTTACTGTTCTTGCTATCGTATGGCATACACATCTGCCTGGATATATTTCTACTCGACCAAAGTTTTGTAAGAAACAATACAGAATTTGGGGATGGGAGGGAGGATATTTTGAGAAGTACTTACAAAAGATTTATCTGTAAGCTTGACCTCAGGGGTACGGTTTTAGCTCCCTAGACTCTTTAACAGCTTTTGCTCTAAAACTATTAAAGTGTTTCTTAGTGATGAAAAAGTAAAGATCTTGCTAACATTAATACAAGGAGCATTTCACCTTTTAGATATTAAATTCTTATGTGGACTTATTTCCAACTAACTTTTTCGATTCCTGTGAGGGCGGGTGACTGGTGGCCTTGTGCGATGCTGAGATGTACCATGGAGCTTTTCATAGAAGGCAGATCGGTTTCCTCTGAGGAGATACTGACAGTGGATACGCTTAAGAGTTAACTTGATGATTGTCACAGGTGCTGTGAAATGCATTTGCACATTGTGATAAGATATCATGAGATGAATTGTTCAGAACCATAGCCAAAAGAAATGTAAACTTGCTTAAAAATCCTTTCACTCTTTGTATTTTTTTAAAATGGTTTTTATTCCTTAGATGTAAAATGACTACTTAATTTTTTTTGATGTAAACTCATTAAATTCAAAGAAAAAA