Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

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Summary

Gene Name Snw1
Plot displaying the genomic locations of a parental gene (in chr6) and its retrocopy(ies). Each line represents a retrocopy.
Specie Rattus norvegicus
Full Name SNW domain containing 1
Also known as RGD1561926
Coordinate chr6:111483698-111507782
Strand -
Gene summary Predicted to enable several functions, including Notch binding activity; nuclear receptor binding activity; and transcription coactivator activity. Involved in Schwann cell proliferation. Located in chromatin and cytoplasm. Part of SMAD protein complex. Used to study sciatic neuropathy. Human ortholog(s) of this gene implicated in breast cancer and pancreatic cancer. Orthologous to human SNW1 (SNW domain containing 1). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Snw1

Retroname Coord Strand Genomic Region ENSG
Snw1P1 chr7:88282269-88282644 - Intergenic
 N/A UCSC
Snw1P2 chr18:76463605-76465193 + Intergenic
 N/A UCSC
Snw1P3 chrX:9365991-9366574 - Intergenic
 N/A UCSC

Expression

Transcript Sequences

>NM_001109279.1
TTCCCGGGCAAGAATAGCCCCGCGACGCTGTGGCCTGCGCAGGAAGAAGCGGAAGAAGATGGCGCTCACCAGCTTTTTACCTGCGCCTACCCAGCTATCTCAGGACCAACTTGAAGCTGAAGAAAGGGCAAGATCTCAGAGATCACGACAGACCTCCCTGGTCTCCTCTCGAAGGGAGCCTCCCCCATACGGATACAGGAAAGGCTGGATTCCAAGACTCTTAGAGGATTTTGGAGATGGAGGCGCTTTCCCAGAAATCCATGTGGCCCAGTATCCTCTGGATATGGGGCGAAAGAAAAAAATGTCGAATGCACTGGCCATTCAGGTGGATCCTGAAGGGAAAATTAAATATGATGCAATTGCTCGACAGGGACAGTCCAAAGACAAGGTCATTTACAGCAAATACACGGACCTGGTTCCAAAGGAGGTTATGAATGCAGATGACCCAGACCTGCAGAGGCCCGATGAGGAAGCAATTAAAGAGATAACAGAAAAGACAAGAGTTGCCTTGGAGAAGTCTGTGTCTCAGAAGGTTGCTGCGGCCATGCCAGTTCGTGCAGCTGACAAGCTGGCTCCTGCTCAGTATATCCGTTACACACCATCTCAGCAAGGAGTAGCATTCAATTCTGGAGCTAAACAGAGGGTTATTCGGATGGTAGAAATGCAGAAAGATCCAATGGAGCCTCCAAGATTTAAGATTAATAAGAAAATTCCCCGGGGACCACCATCTCCTCCTGCACCTGTAATGCACTCTCCTAGTCGGAAGATGACTGTAAAGGAGCAGCAGGAGTGGAAGATCCCTCCTTGTATTTCCAACTGGAAGAACGCTAAGGGGTATACGATTCCACTAGATAAACGGCTGGCTGCTGATGGAAGAGGACTTCAGACTGTCCACATCAATGAAAATTTTGCCAAACTGGCTGAAGCCCTATACATTGCAGATCGGAAGGCTCGAGAAGCGGTGGAAATGCGAGCCCAAGTGGAGAGAAAGATGGCTCAGAAAGAAAAGGAGAAGCATGAGGAGAAACTCAGAGAAATGGCCCAGAAAGCCAGAGAAAGGAGAGCTGGGATCAAAACCCATGTGGAAAAAGAGGATGGAGAGGCCCGAGAAAGAGATGAAATCCGTCATGACAGGCGAAAAGAGAGGCAGCATGACCGGAACCTTTCCAGAGCAGCTCCTGATAAGAGGTCCAAACTACAGAGAAATGAAAATCGAGATATCAGTGAAGTCATTGCTCTTGGTGTGCCCAATCCTCGAACTTCCAATGAAGTCCAGTATGACCAAAGGCTCTTCAACCAGTCCAAGGGTATGGACAGTGGATTTGCAGGTGGAGAAGATGAAATTTACAATGTTTATGATCAAGCCTGGAGAGGTGGCAAAGATATGGCTCAGAGTATCTATAGGCCGAGTAAAAATCTGGACAAGGACATGTATGGCGATGACCTCGAAACCAGGATAAAGACCAACAGATTTGTTCCTGATAAAGAGTTTTCAGGTTCAGATGGTAGAAAGAGAGGCCGAGAAGGACCAGTTCAGTTTGAGGAAGATCCTTTTGGTTTGGACAAATTTTTGGAAGAAGCAAAACAGCATGGTGGGTCTAAAAGACCTTCAGATAGCAGTCGCCCCAAGGAACATGAACATGAAGGCAAGAAGCGAAGGAAGGAGTAGATGGGCCTCTTGAAATTAAATCTGacgtatacagcagaggactgcctggtctggccagagtgagagaaaatggacctaaccctcaagagacttgagaccacaaagaatggggaagcctggggggtggggggtggggtggggcatcctcttggagacaggggaagaggaatttttggagagatgatggggagggggataacaactggactgtatttaaaaaaaaaATTAAAAAAAAAAACAAACCAAATCTGGGTGATAGATCCCAACACTCCTTCCATCCAGGAGATAGAGGCAATGCATATTCTATTTCGCAGTAGTTTTTATAAAGAATGGTCTGTGTTTGTGCCTCTCCAATCTTGCAGCACTTATAAAAAATACTGCCCCTGACAAAATTGAGGCTACTTCCTTGCTAATCCAGGGGTAAAATTTTCTGTAAGAACTTTATGAATTACCCCAAATGGTTAGTAGGTGGATGCTCATACACTCGAACTGTGCTGGCAGATGCATTTGCCCTGTTGGACTCTTCTACTGTGCAGTGGGGAAACCAAGTTCTTGCTTAGTGCAAACTAGTTTCaaaaaaaaaaaaaaaaaCACATTTAGAAAAA