Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

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Summary

Gene Name Yju2
Plot displaying the genomic locations of a parental gene (in chr9) and its retrocopy(ies). Each line represents a retrocopy.
Specie Rattus norvegicus
Full Name YJU2 splicing factor
Also known as Ccdc94
Coordinate chr9:11098914-11108806
Strand -
Gene summary Predicted to enable metal ion binding activity. Predicted to be involved in RNA splicing. Predicted to be part of U2-type catalytic step 1 spliceosome. Orthologous to human YJU2 (YJU2 splicing factor homolog). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Yju2

Retroname Coord Strand Genomic Region ENSG
Ccdc94P1 chr6:103716242-103718678 - Intergenic
 N/A UCSC
Ccdc94P3 chr16:22851291-22853032 - Intragenic
 N/A UCSC
Ccdc94P2 chr9:18215479-18216638 + Intergenic
 N/A UCSC

Expression

Transcript Sequences

>NM_001109673.1
ATTTCTTCTCTTGTTCGTTGAACAGGAAGCGAAGATGTCGGAACGGAAAGTTTTAAACAAATACTACCCACCTGACTTTGACCCATCGAAGATCCCGAAACTCAAGTTACCCAAGGACCGGCAGTACGTGGTGCGGCTGATGGCCCCATTCAACATGAGGTGTAAGACATGTGGAGAATACATCTACAAGGGGAAGAAGTTCAATGCACGAAAGGAAACAGTCCAGAATGAGGCATACCTGGGCTTGCCAATCTTCCGTTTCTATATCAAGTGCACACGCTGCTTGGCCGAGATCACCTTTAAGACAGACCCAGAGAACACAGACTACACCATGGAGCATGGGGCCACGCGCAACTTCCAGGCTGAGAAGCTTCTGGAGGAGGAGGAAAAGCGCATGCAGAAGGAGCGTGAGGATGAGGAGCTGAACAACCCCATGAAGGTCCTAGAGAACCGTACAAAGGACTCTAAGCTGGAGATGGAAGTGCTAGAGAACCTACAAGAGCTAAAAGACCTGAACCAGCGGCAGGCCCACGTGGACTTTGAGGCCATGCTGCTACAACACCGCCTATCTCAGGAGCAGTGGCAACAGCAGCAGGAAGAGGAAGACGAGCGTGAGACAGTGGCCTTGCTGGAGGAGGCTCGTTATCGAAGGCTTCTGGATGACTCTGACTCAGAGGATGAGGCTCCACCTTCCCAACCACAGGCAGCTGCAAGACCCAACCCCACAGCCATTCTTGATGAGGTACCAAAGACCAAGAGGAAGGCAGAGGGCCTGTGCAGGAAAGCCCAGTTGGCAGGCTTGGTTATACCAAAGAAGGCAAAGACGGAAGCCAACCGGGTTTCAGAGCAGGTCCGGGTGCCCACCACTGGTGCCCCCGAGAGCAGGAAGGTGGCCAACCCTGCACCCCAGACACCTGGTGCCTCCTCCCTGAGCCAGCTCGGTGCATATGGGGACAGTGAGGACAGTGACAGCTGAGCATCAGTGATGCTCACCGTGGCATCATAGACCAAGAAATGAAGATGGTATCAAGCAAACACCTTCAGCCAAGCCTCAGGACCATTCTACCATGGGTGGGCAGGGTGTGGAGAAGCACTGTCCCCAGGCACCCCAGGACAGACAGCCTGGTCCAGTCCTTCAGTCCTTGATGTGTGAAGCCTGTTAACTGATCCCTTCCTGCAGCAGATGTGAACACTGTCTGACATAGGATGGGGGCAGGGACCCTGGGCAGCATCTGCCAACCATACGCAAGGCCTGGGGCTCCACCCACATGCAACACAGTAGTACTGTAAAAACAAGAAGAATAGAAAATCAGCTGAAGCTTTTGGACCGGAAGACAGTGGAGACAAAATGAACAGGACTCCAAAGGACTTGTCCAGGATTCCACAGTGACTCAGAAGCAAGCCCAGTGAGTCAATGTCCTGACCAATCTGTGGCCCACTGTGTGCCAGTTCACGACATTCGGTCTCCAGTGTGGAGGAAAgtgacccatcccagtaaatgcagcacccaggagctggacatagaatctgagtacaaagccatccttggctataaggctttcgtggcacaacccaggcCTGTCTAAACCTCGGAAGGCTTGTTTGCTACTTTCAAACAAGAACACCAAAGTCTGGTTGCAACAGGAACTTCACAGTCGAAAAAGCTTAAAATGTAGCCTGGGCCTGGGCTTGTCCACCTCAATACAGCAAACTTTTGACAGCCCCTCACTGTGGAATGACACCACAGACATTTCACACCTAATATAAAGCTGGTGGGAGCAACACCACTGTACCCTCAGAGACTGGTTCTCCCTCAAAACTGTCACTGCTAAACAGGTAAGAGTGTTCGCAGCAGGGTTGGGGGAGGGGTCAAGCAAATGTCATTCCACAGCCTGGAAATCCTAATCTTCCTTTAATAAGAGTTAACCTCCTCCTAAGGTTTTCCTCATTGTATACTAAAAGCAAGTGTTCGTTACCTCGGTGAAATCTGCCGGAACTAGCATGTATTTGCCACTGGAACAAACAATGGGTTTTTCTTAATTAATAAAACATTAACATGAAAATGTCAAAAAA
>XM_006244336.3
ACGGCTGAGGAAGTGGCGACACTGAGGCTCCTGATCCGAGAAACTCCACGAGGACTAAGAGAACAATTTCTTCTCTTGTTCGTTGAACAGGAAGCGAAGATGTCGGAACGGAAAGTTTTAAACAAATACTACCCACCTGACTTTGACCCATCGAAGATCCCGAAACTCAAGTTACCCAAGGACCGGCAGTACGTGGTGCGGCTGATGGCCCCATTCAACATGAGGTGTAAGACATGTGGAGAATACATCTACAAGGGGAAGAAGTTCAATGCACGAAAGGAAACAGTCCAGAATGAGGCATACCTGGGCTTGCCAATCTTCCGTTTCTATATCAAGTGCACACGCTGCTTGGCCGAGATCACCTTTAAGACAGACCCAGAGAACACAGACTACACCATGGAGCATGGGGCCACGCGCAACTTCCAGGCTGAGAAGCTTCTGGAGGAGGAGGAAAAGCGCATGCAGAAGGAGCGTGAGGATGAGGAGCTGAACAACCCCATGAAGGTCCTAGAGAACCGTACAAAGGACTCTAAGCTGGAGATGGAAGTGCTAGAGAACCTACAAGAGCTAAAAGACCTGAACCAGCGGCAGGCCCACGTGGACTTTGAGGCCATGCTGCTACAACACCGCCTATCTCAGGAGCAGTGGCAACAGCAGCAGGAAGAGGAAGACGAGCGTGAGACAGTGGCCTTGCTGGAGGAGGCTCGTTATCGAAGGCTTCTGGATGACTCTGACTCAGAGGATGAGGCTCCACCTTCCCAACCACAGGCAGCTGCAAGACCCAACCCCACAGCCATTCTTGATGAGGTGCCCCCGAGAGCAGGAAGGTGGCCAACCCTGCACCCCAGACACCTGGTGCCTCCTCCCTGAGCCAGCTCGGTGCATATGGGGACAGTGAGGACAGTGACAGCTGAGCATCAGTGATGCTCACCGTGGCATCATAGACCAAGAAATGAAGATGGTATCAAGCAAACACCTTCAGCCAAGCCTCAGGACCATTCTACCATGGGTGGGCAGGGTGTGGAGAAGCACTGTCCCCAGGCACCCCAGGACAGACAGCCTGGTCCAGTCCTTCAGTCCTTGATGTGTGAAGCCTGTTAACTGATCCCTTCCTGCAGCAGATGTGAACACTGTCTGACATAGGATGGGGGCAGGGACCCTGGGCAGCATCTGCCAACCATACGCAAGGCCTGGGGCTCCACCCACATGCAACACAGTAGTACTGTAAAAACAAGAAGAATAGAAAATCAGCTGAAGCTTTTGGACCGGAAGACAGTGGAGACAAAATGAACAGGACTCCAAAGGACTTGTCCAGGATTCCACAGTGACTCAGAAGCAAGCCCAGTGAGTCAATGTCCTGACCAATCTGTGGCCCACTGTGTGCCAGTTCACGACATTCGGTCTCCAGTGTGGAGGAAAgtgacccatcccagtaaatgcagcacccaggagctggacatagaatctgagtacaaagccatccttggctataaggctttcgtggcacaacccaggcCTGTCTAAACCTCGGAAGGCTTGTTTGCTACTTTCAAACAAGAACACCAAAGTCTGGTTGCAACAGGAACTTCACAGTCGAAAAAGCTTAAAATGTAGCCTGGGCCTGGGCTTGTCCACCTCAATACAGCAAACTTTTGACAGCCCCTCACTGTGGAATGACACCACAGACATTTCACACCTAATATAAAGCTGGTGGGAGCAACACCACTGTACCCTCAGAGACTGGTTCTCCCTCAAAACTGTCACTGCTAAACAGGTAAGAGTGTTCGCAGCAGGGTTGGGGGAGGGGTCAAGCAAATGTCATTCCACAGCCTGGAAATCCTAATCTTCCTTTAATAAGAGTTAACCTCCTCCTAAGGTTTTCCTCATTGTATACTAAAAGCAAGTGTTCGTTACCTCGGTGAAATCTGCCGGAACTAGCATGTATTTGCCACTGGAACAAACAATGGGTTTTTCTTAATTAATAAAACATTAACATGAAAATGTCAAAAAATGAA