Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

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Summary

Gene Name Trappc2
Plot displaying the genomic locations of a parental gene (in chrX) and its retrocopy(ies). Each line represents a retrocopy.
Specie Rattus norvegicus
Full Name trafficking protein particle complex subunit 2
Also known as RGD1306925
Coordinate chrX:29550871-29562135
Strand -
Gene summary Predicted to enable transmembrane transporter binding activity. Predicted to be involved in endoplasmic reticulum to Golgi vesicle-mediated transport; regulation of transcription, DNA-templated; and skeletal system development. Predicted to be located in endoplasmic reticulum; nucleoplasm; and perinuclear region of cytoplasm. Predicted to be part of TRAPP complex. Predicted to be active in cytoplasm and nucleus. Human ortholog(s) of this gene implicated in X-linked spondyloepiphyseal dysplasia tarda. Orthologous to human TRAPPC2 (trafficking protein particle complex subunit 2). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Trappc2

Retroname Coord Strand Genomic Region ENSG
Trappc2P1 chr10:35036430-35036864 - Intergenic
 N/A UCSC
Trappc2P2 chr10:37130488-37130922 - Intergenic
 N/A UCSC

Expression

Transcript Sequences

>NM_001024965.1
CGCAGGTTCGCGAGgaaacacattccagatttctttggatgtcattgattttcctgtgaatcagcagaagacctagaggggcttgGAGCTACATATTGAAGACAATGTCTGGAAGCTTCTACTTTGTAATTGTTGGCCACCATGATAATCCAGTTTTTGAAATGGAATTTTTGCCACCTGGGAAAGCAGAATCCAAAGATGATCACCGTCATCTGAACCAGTTTATAGCTCATGCTGCTCTTGACCTTGTGGATGAAAATATGTGGCTTTCTAACAACATGTACTTAAAAACTGTGGACAAATTTAATGAGTGGTTTGTGTCAGCATTTGTCACTGCAGGGCATATGAGATTTATTATGCTTCATGATGTGAGGCAAGAAGATGGAATAAAGAACTTCTTTACTGATGTCTATGATTTGTATATAAAGTTTGCAATGAATCCATTTTATGAACCCAATTCTCCTATTCGATCAAGTGCATTTGACAGAAAAGTTCAGTTTCTTGGGAAGAAACACCTTTTAAGCTAAATGGAGAAACTCTGCAATAAGCTGTATCATCGTGGGGTGTGCTCAGGAGTGTGTGTTCTGTAAGTAATTTGAAATTGCCTGGAAAACGTTCCCTTAAAATTGTACATTGTTTTCATATTGACTGTCATTAGCATTGATATTTGCTTGTGGACAATGTTATTTACAAACAGTTCTGTACCAGTAATTTTGAACACTTTTATTTATTTAAAAGCTTGAGAAGACTCTTGCCTTTCCTAAGATAATTTGATATTAATTTATTAATTCAAAAGCATATTATGTCATAGTTAATATTTGTTAGAATGATTTAAGACTGAAAAGTTCTGGAGATGAATGAAATTGAGTTATTTACACATTTAGAGATGTTCTTTTAAAATGCATAGTACACTGCAGTACCAAGAAGCTGAAGCAGAAAGCCCATGCCAGTGCTACCCGCTTGCCTCCCTCCACCAGAGGCTGTGAATAATCACCCGGCTGTAACTCTAAACCCCTAGACCTATATATGCTGGACCAGTTCCAGGCCATGGCAAAGTATGTTGCCTCTGTCACCTTATATTCTAGTGTTTCCTTTCTCTTAGTAAACTAAAGGTTTACTTTATTTAAACTTGTTAATATCTGTATTTGAAAAAATGTTATAATACTGATTGGGTATTGCTAATAAAAGCTTGGGTTATACTGACACTTGCACTTAACTAACCTTTTTGCTATCTATATACAGGATGCGAGGTGGCAGATGTGGCCTCTTGTCTTAGATATGGTGGTGTTACAGTAGTAGATATGCATGAAAAAGCAAACCAGATTTTCATGTGTACACTGGAAAAATTTCATTCTAACATTTGAGTAAGCACTTCTAAACTTTCTTGTATTCTTTGGTGACATTGTTACTATCACTTTTTTTTATTTCTTAAATAAAGATTTATATCCAA