Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name Gtf2h5
Plot displaying the genomic locations of a parental gene (in chr1) and its retrocopy(ies). Each line represents a retrocopy.
Specie Rattus norvegicus
Full Name general transcription factor IIH subunit 5
Also known as RGD1560991
Coordinate chr1:46978345-46985032
Strand +
Gene summary Predicted to be involved in nucleotide-excision repair, preincision complex assembly; phosphorylation of RNA polymerase II C-terminal domain; and transcription by RNA polymerase II. Predicted to act upstream of or within cellular response to gamma radiation and nucleic acid metabolic process. Predicted to be located in nucleolus. Predicted to be part of transcription factor TFIID complex; transcription factor TFIIH core complex; and transcription factor TFIIH holo complex. Human ortholog(s) of this gene implicated in photosensitive trichothiodystrophy 3. Orthologous to human GTF2H5 (general transcription factor IIH subunit 5). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Gtf2h5

Retroname Coord Strand Genomic Region ENSG
Gtf2h5P1 chr6:28557536-28558031 + Intergenic
N/A UCSC

Expression

Transcript Sequences

>XM_006227894.2
GGCGCGATGACGTACGACGACGCAGGCGCAGTGAGTAGGCGACGCTGGGACGGCCCTGGTTGTGTCGGGGGCGGAACTCTGCTGGCTTTGAGCGCCTTCAAACAAATTCTTGAAGTCATCCGCACTGTCTGCCTGAGGAAAGATGGTCAACGTCTTGAAAGGAGTGCTTATAGAATGCGATCCCGCCATGAAGCAGTTTTTGCTGTACTTGGATGAGTCCAATGCCTTGGGGAAGAAGTTCATCATTCAAGACATTGATGACACACATGTCTTTGTCATTGCGGAACTGGTTAATGTTCTCCAGGAGCGAGTAGGGGAACTGATGGACCAGAATGCCTTTTCTCTTACCCAGAAGTGAGAGCTCTAGTGTTAAGCACTTGGCAATCCCAACCACAGACAGGAGAGAGGCCTGCTTAGTGTCTCCTGGAGTTTAGACTTGTTACAAGCATTTGGTGGGAAAGGCTGCTGCAGGGTCATTCACTCAGATGTAAGCTCCCAACTGATTTTGATGGACCATTAAAAAAATCTTTGTAAAGAAGAATTTTAACAACTGGCTGCAATTTGGCTTTTACTGTTTGTTATTAAAATATAATCATAGCTGTgctggtgggatggctcagttggtaaaggcccttgccactaagccagacaccctgaccacactacaaggtgagaactctgcaggttgtcctctgaccctcGTGTGTGTAGCTCCCTCCTGCACAAATAAGTAAATGTAATAAAATGTAATCATAAATGTTTTCCCTGCCTTTTTAAAACACCAATTAAATACACCAGAAAAATA