Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name Hmgn5
Plot displaying the genomic locations of a parental gene (in chrX) and its retrocopy(ies). Each line represents a retrocopy.
Specie Mus musculus
Full Name high-mobility group nucleosome binding domain 5
Also known as GARP45|NBP-45|Nsbp1
Coordinate chrX:108048143-108056986
Strand -
Gene summary Enables chromatin binding activity. Acts upstream of or within chromatin organization; glutathione metabolic process; and regulation of transcription by RNA polymerase II. Located in nucleoplasm. Is expressed in several structures, including 1st branchial arch; genitourinary system; gut gland; hemolymphoid system gland; and musculature. Orthologous to human HMGN5 (high mobility group nucleosome binding domain 5). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Hmgn5

Retroname Coord Strand Genomic Region ENSG
Hmgn5P1 chr4:27867148-27867745 - Intergenic
ENSMUSG00000082674 UCSC
Hmgn5P2 chr9:80896502-80899074 - Intergenic
ENSMUSG00000099085 UCSC

Expression

Transcript Sequences

>NM_016710.2
TATCGTGCTGCAATTAGTTCATTGAAAACTCAGTCGCTCGCGGAGCGGTCAGGCAGAGACTCCTCTCGGCTTTTTTCCCTCCTGCCTAAGGATCTCCAACGGAGAGCTGCAACAATGCCCAAAAGAAAGGCTGCAGGTGATGTGAGCCAGGAGCCAAAGAGAAGATCAGCCCGACTGTCTGCTATGCCTGTGCCCTTTACACCGGAGTTGAAACCTAAAAGAGCATCAACTTCAAGGAAAACCAAGACCACAAATGTCgtggaagaaaacaaagatgcaAGTACCATACCAATTCCTGAAACCAAGCCAGAAGATGTTAAAGACGAATGCAACATGGAAAATGCTGAAAATGGAGAAGCCAAGATTATGGAGGCACCCATTCCTAAAATGGAAGCTGAGGAAGTAAAAGAACAGATAAATGAAGACActgaagaagatggaggagaaaagaaagaagcagtGGCAGCAGAAGCCAAAGATGATGAGCTAAAAGCAAACAttcaagatgtggagaaagatgaagatGGAAAAGAGCACAAAGATACAGGTGAGGAGGTGGAAGAcggaaaaatagaagaagaaggccTAAACGAGAAACCAGGTACAGCCAAAAGTGAAGATGCAGAGGTGTCcaaagatgaagaagagaaaggagacaatGAAAAAGGAGAAGATGGCAAAGAAGAAGgtgatgagaaggaagaagagaaagatgacaAAGAGGGGGACACTGGAacagaaaaagaagtaaaagaacaaaacaaggaaGCCGAGGAGGATGATGGGAAATGCAAAGAGGAGGAAAACAAGGAAGTTGGAAAGGAAGGTCAGCCTGaggaagatggaaaggaagaTCTGCATGaggaagttggaaaggaagatcTGCATGAGGAAGATGGAAAGGAAGGTCAGCCTGAGGAAGATGGGAAGGAAATTCATCATGAGGAAGATGGAAAGGAAGGTCAGCCtgaagaagatggaaaggaaTATCTGCatgaggaagatggagaggaaggtCAGCCTAAGGAAGATCAAAAGGAAGGTCAGCCTGaggaagatggaaaggaagaTCAGCCTGAGGAAGATGGAAAGGAAGGTCAGTGTAaggaagatgggaaggaaggTCATCATGAGGAAGGTGGAAAGGAAGATCTGCATGAggaagatggaaaggagaaagatggTGGAAAAGAGgatagaaaggaagaaggagagcaaGAGGTTGCTGTAGATGAAGGGAGTGATGAAAacaaggtggaggcagaagaagaaggagCCGAAAACAAAGACTTCAAACAAGACGGAGAGAAAGAGGAGCCTCTGAGTATTGTCTAAAACTGCCCTCTGTGAGATCATAATTCGGTAACACGTACCTTCCTGTTGTAATGTTAATAgagataaatatttttatcagatattttataAACAGTGCTTTTCTTTAGCATCATTCAATCttagatcatcatcatcatacaGGTTATTAGTTGCAAAATGCCTAACATGACACCTTTATACATTTTGTGATTATAGTAgtgcaaaatataaaatgtatacttGCAACTTTGTGAATTTCATCATGTGTAAGTTATGTATTAAATCTTTGAGTTTCAATTTTATTCTTATACGTGGTAAATTTGCAGAGTAGGAGAATTCCAAAAGAAAGAGTTTGGCACAACTTTGATGTAGTTCTCTAGGTTGCTTTTATAAAGAAGGTCAACTATTTTCAGGTAATGCTAAGAGTCGGAATTGACATTACCAAATACAACTGTATTAGTAGCTTGGaaagtataaaattttaatttcatttttgaagAAATTTGAATGTTTATTTCAGGAGGGCAGTTTTgattatatgtgtatgcacaaagTTTTGCTGGATTTATCATAATAAAAGAGTTCCACAAATA