Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name FCF1
Plot displaying the genomic locations of a parental gene (in chr14) and its retrocopy(ies). Each line represents a retrocopy.
Specie Homo sapiens
Full Name FCF1 rRNA-processing protein
Also known as Bka|C14orf111|CGI-35|UTP24
Coordinate chr14:74713118-74738620
Strand +
Gene summary Enables RNA binding activity. Predicted to be involved in rRNA processing. Predicted to act upstream of or within endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) and endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA). Predicted to be located in nucleoplasm. Predicted to be part of small-subunit processome. Predicted to be active in nucleolus. [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from FCF1

Retroname Coord Strand Genomic Region ENSG
FCF1P10 chr7:139198493-139199140 - Intergenic
ENSG00000271537 UCSC
FCF1P7 chr1:243267620-243268165 - Intragenic
ENSG00000224727 UCSC
FCF1P6 chr1:50405187-50406062 - Intergenic
ENSG00000225671 UCSC
FCF1P3 chr3:106848655-106849750 + Intergenic
ENSG00000239997 UCSC
FCF1P2 chr3:48290733-48291368 - Intragenic
ENSG00000228638 UCSC
FCF1P8 chr4:55351545-55352426 - Intragenic
ENSG00000251111 UCSC
FCF1P1 chr7:23619307-23623117 + Intragenic
ENSG00000227436 UCSC
FCF1P9 chrX:86481550-86481882 + Intragenic
ENSG00000231478 UCSC

Expression

Transcript Sequences

>NM_001318508.2
GTAGAAGTATTGCGCCGTTGGTGATTACGGAAGAACCAGGAGTTTGGCGTGACCATGGTGAGAGAAGACGGTCCAAGAAGGGACGTTATCAGGCCACTTTTTGGGTGGAGAAGGAGGGGAAGCAAAAGAAAACAAGGAAGTATGCGACCATGAAGCGAATGCTTAGTCTCAGAGATCAGAGGCTtaaagaaaaggatagattaaaacctaaaaagaaagaaaagaaGGATCCCAGCGCATTAAAGGAAAGAGAAGTTCCCCAACACCCTTCCTGCTTATTTTTCCAATATAATACACAGCTGGGCCCACCTTACCACATCCTCGTTGATACCAACTTTATCAACTTTTCCATAAAAGCCAAACTGGACTTAGTGCAGTCAATGATGGACTGTCTGTATGCCAAGTGTATCCCATGTATAACCGATTGTGTAATGGCTGAAATTGAGAAATTGGGGCAGAAGTATCGAGTGGCTCTAAGGATTGCCAAGGATCCAAGATTTGAACGATTACCATGTACACACAAAGGAACCTATGCAGATGACTGCTTAGTACAGAGAGTAACTCAGCATAAGTGTTACATTGTGGCCACAGTTGACCGGGACCTGAAAAGAAGAATCCGTAAGATTCCTGGAGTTCCTATCATGTACATTTCTAACCATAGATACAACATTGAACGGATGCCAGATGATTATGGAGCCCCTCGATTCTAATTCTTACAAGACACAGTTCCTCTGCCTTTCTTCGACCAACTTTCTCTTGTTGCCAGTTCATTACACAAAATGTAGCgggatttttaaggaatcagagagactgatggagttcagggagatatttattatttaggtgcaccagcccagtcagattaacatccaaaggactgaaccctgaacagagttaagttaccttttaagcattttgtggggccgcgggggttggggggaatctgtgcagggggaagcatattacagaagcaagaaagacagttattcaattaactgagacatgcattacatcatttcttacttttcaaggaaaatcatgttttacgacttgagtttatctgtctagttaccttgcagctgcacagctagagaaacagggtatttacaatgcctgggaaaggaggagagataaggctcactagccacagaaaaacaggcagttaatttttaaaggactccagctctttctctttctcacggggaattggattttcttacatgcaactgaatttctgcttacacatttttaaatttcttttaattgcttttccaATGCAATAGCATGAATTATTATTCTGTTGACCTATTTGCCTTACTATGAGCTGAGGGTAGTTCAATATGCTCACTCttttttttttttttcttgagatgaagttttgctctgtcaccaggctggagtgcagtggcgtgatctgggctcactgcaacccctgcctcccatccttcaagtgattctcctgcctcagcctcccgagtagctgggattacaggtacacaccaccatgctcaactaatttttcttttttgggcggggggggtggatatttttagtagagacaaatacttttgtatttttaatacagaaaagtatgcctcggcctcccaaagtgctggaattacagacatgagccactgtgcctggccTGCTCACTTTCTGATGCTGCTTTTTTGTTGtttgtttgtttatttgtttgttttgagacggagtctcgctctgtcaccaggctggagtgcagtggcgcaatctcggctcattgcaacctccgcctcccaggttcaagcgattctcctgcctcagcctgcggagtagctgggactataggtgcgtgccaccacgtccagcCACTGATGCTGTTTTGCCACTGATGCTGTTTTGAAATTGATATTTTGTCTCATAAAAACTAggccaggcatggtggctcattcctgtaatcccagcactttgggaggccaaggtgggtggatcacctgaggtcaggagttggagatgagcctggacaacatggcaaaaccccacctctactaaaaatacaaaaaaaattagctgggtatggtgtcacgtgcctgtaatcccagccactggggaggctgaggcaggagaacctcttgaacccaggaggtggaggttgcagtgagctgagattgcgccactgcattccagcctgggtgacagagtgagactgtctcaaaaaaaaaaaaaaaTTAatgatggtcaaagggtataaaatctcagacaggaagaatatgttttatgctttttttgagttctgttgtacagtgtggtgcctatacttaataatggggtattatacatttcaaaattgatgttctcatcacagaaatgtatttgaagtattgcatatgttaactagcttgatttaactattccatattgtatccacaatttatgatatcactttgtaacccatacatttatacaattataaattgtcaatttacaataaaaAATTTTTGTTGCGTCTTTTTAGAAATCAGATATTCTGATGATTGCTCACATAATTTGGCGGTCATTGTTTTATACTGacttactcaataaacatttattaaatgtatactaggtgcttaataagagatggtcctgccctcaagacactcattatggtgggaaagaaaaacatgtaaatgaataaatgccgtaaaatagcagtgctagggtaaaagtttcagaggcatgtcatgggcacataaaggtggAATGATTTTTTTCTACTGGTTGGGATGGAGAGGGAGGAAAGGCCAGTGGTCATGTGGTTTGAGCTAATCTTAAAAATGAATAGGTGCCTCCCCAGTAAATTAGGAATGGAAGATGAAGCATAGGAAACAGTACACCATAGAAAATCCATTAACCTATGtataatcccagcactttgggagactgaggtgggcagatcacttgaggtcaggagtttgaaaccagcctggccaacatggtgaaaccccacctctactaaaaattccaaaattaactgggcgtggtggtgcaagcctgtagtcccagctacttgggaggctgaggcaggagaatcgcttgaacccgggaggcagaggttgcaacgagccgagatcacgccactgcactccagcctgggcgacagagtgaaactctgtctcaaaaacaaacaaacaaaaaaCCTATGTATTTGTGGGGATTTGGTATATTATTAAGGTGGTATTTCGTTTCTGTGGGAAAAGGAAATTTCATTAACAGGCCAAATAGtctggagtcattctgttagtgttagaatactaattccaccagttaatatctgtatgagttggacaaaccatataaccatctgttgccttccttgtttcctctttaaagtgtttaatccgcaaaacaaacctgataaagtgagattaaattgaatagtacctggcccaagtaagtgttcttcagtaaatgttagtgattattACACAATGGCAAGGTGGCTATCCATTTGAAAAAAAATTAggccgggcgtggtggctcacacctgtaatcccaacactttgggaggccaaggtgggcggatcacctgaggtcaggagcccaagaccagcctgaccaacatggagaaaccccatctctactaaaaatacaaaaaaacaattaggcaggcatggtggcaaatgcctgtattcccagctactctggaggctgaggcaggagaacgcttgaacctgggagatggaggttgtgatgagccgagatcatgccattgcactcattccagcctgggcaacaagagtgaaactctgtctcaaaaaaaaaaaaaaaaaaaGAGAGAGAgaaaaaaattagtttcctacttcacatgattcataaaaatatttcaagtggatcaaagacctaaattttttttttttttgagacagtttctcactctgtcacccaggctgcagtgcgttggcacaatcatgactcactgcagccttgaccttcccaggccctgatgatccaccccagcctctcaagtagctgggatttttgtatttcttacagagatgggattttgccttattgcccaccttggccttctaaagtattgggattatgggcatgagccactgcacccACCCTAAACTTATTTCTAAGCTATGGAAGCATTAGGAAAATAAATGTAAAGAAAAACGTGTTTATCACCTTTGGATAGAATTCTTAAGCAGAATCTAAAAAGATTGAAGAGTTTGAATATATTAAAATTATAGATTTCTGTGCAAGACACTCCCCTCCCCTAAAAAACAAGTGACTGATGAGATTTTCCAATACATGTAACAAGGGTTTAGAGAAATGAGTACTGATGTCATGCTGACAGAAGTGCAAATATTTATGGCCATTTTTTACAGCTGTTGACAAGATCCACTAAAATAAAAATTGCAGATATCCTGTGA
>NM_015962.5
GTAGAAGTATTGCGCCGTTGGTGATTACGGAAGAACCAGGAGTTTGGCGTGACCATGGGGAAGCAAAAGAAAACAAGGAAGTATGCGACCATGAAGCGAATGCTTAGTCTCAGAGATCAGAGGCTtaaagaaaaggatagattaaaacctaaaaagaaagaaaagaaGGATCCCAGCGCATTAAAGGAAAGAGAAGTTCCCCAACACCCTTCCTGCTTATTTTTCCAATATAATACACAGCTGGGCCCACCTTACCACATCCTCGTTGATACCAACTTTATCAACTTTTCCATAAAAGCCAAACTGGACTTAGTGCAGTCAATGATGGACTGTCTGTATGCCAAGTGTATCCCATGTATAACCGATTGTGTAATGGCTGAAATTGAGAAATTGGGGCAGAAGTATCGAGTGGCTCTAAGGATTGCCAAGGATCCAAGATTTGAACGATTACCATGTACACACAAAGGAACCTATGCAGATGACTGCTTAGTACAGAGAGTAACTCAGCATAAGTGTTACATTGTGGCCACAGTTGACCGGGACCTGAAAAGAAGAATCCGTAAGATTCCTGGAGTTCCTATCATGTACATTTCTAACCATAGATACAACATTGAACGGATGCCAGATGATTATGGAGCCCCTCGATTCTAATTCTTACAAGACACAGTTCCTCTGCCTTTCTTCGACCAACTTTCTCTTGTTGCCAGTTCATTACACAAAATGTAGCgggatttttaaggaatcagagagactgatggagttcagggagatatttattatttaggtgcaccagcccagtcagattaacatccaaaggactgaaccctgaacagagttaagttaccttttaagcattttgtggggccgcgggggttggggggaatctgtgcagggggaagcatattacagaagcaagaaagacagttattcaattaactgagacatgcattacatcatttcttacttttcaaggaaaatcatgttttacgacttgagtttatctgtctagttaccttgcagctgcacagctagagaaacagggtatttacaatgcctgggaaaggaggagagataaggctcactagccacagaaaaacaggcagttaatttttaaaggactccagctctttctctttctcacggggaattggattttcttacatgcaactgaatttctgcttacacatttttaaatttcttttaattgcttttccaATGCAATAGCATGAATTATTATTCTGTTGACCTATTTGCCTTACTATGAGCTGAGGGTAGTTCAATATGCTCACTCttttttttttttttcttgagatgaagttttgctctgtcaccaggctggagtgcagtggcgtgatctgggctcactgcaacccctgcctcccatccttcaagtgattctcctgcctcagcctcccgagtagctgggattacaggtacacaccaccatgctcaactaatttttcttttttgggcggggggggtggatatttttagtagagacaaatacttttgtatttttaatacagaaaagtatgcctcggcctcccaaagtgctggaattacagacatgagccactgtgcctggccTGCTCACTTTCTGATGCTGCTTTTTTGTTGtttgtttgtttatttgtttgttttgagacggagtctcgctctgtcaccaggctggagtgcagtggcgcaatctcggctcattgcaacctccgcctcccaggttcaagcgattctcctgcctcagcctgcggagtagctgggactataggtgcgtgccaccacgtccagcCACTGATGCTGTTTTGCCACTGATGCTGTTTTGAAATTGATATTTTGTCTCATAAAAACTAggccaggcatggtggctcattcctgtaatcccagcactttgggaggccaaggtgggtggatcacctgaggtcaggagttggagatgagcctggacaacatggcaaaaccccacctctactaaaaatacaaaaaaaattagctgggtatggtgtcacgtgcctgtaatcccagccactggggaggctgaggcaggagaacctcttgaacccaggaggtggaggttgcagtgagctgagattgcgccactgcattccagcctgggtgacagagtgagactgtctcaaaaaaaaaaaaaaaTTAatgatggtcaaagggtataaaatctcagacaggaagaatatgttttatgctttttttgagttctgttgtacagtgtggtgcctatacttaataatggggtattatacatttcaaaattgatgttctcatcacagaaatgtatttgaagtattgcatatgttaactagcttgatttaactattccatattgtatccacaatttatgatatcactttgtaacccatacatttatacaattataaattgtcaatttacaataaaaAATTTTTGTTGCGTCTTTTTAGAAATCAGATATTCTGATGATTGCTCACATAATTTGGCGGTCATTGTTTTATACTGacttactcaataaacatttattaaatgtatactaggtgcttaataagagatggtcctgccctcaagacactcattatggtgggaaagaaaaacatgtaaatgaataaatgccgtaaaatagcagtgctagggtaaaagtttcagaggcatgtcatgggcacataaaggtggAATGATTTTTTTCTACTGGTTGGGATGGAGAGGGAGGAAAGGCCAGTGGTCATGTGGTTTGAGCTAATCTTAAAAATGAATAGGTGCCTCCCCAGTAAATTAGGAATGGAAGATGAAGCATAGGAAACAGTACACCATAGAAAATCCATTAACCTATGtataatcccagcactttgggagactgaggtgggcagatcacttgaggtcaggagtttgaaaccagcctggccaacatggtgaaaccccacctctactaaaaattccaaaattaactgggcgtggtggtgcaagcctgtagtcccagctacttgggaggctgaggcaggagaatcgcttgaacccgggaggcagaggttgcaacgagccgagatcacgccactgcactccagcctgggcgacagagtgaaactctgtctcaaaaacaaacaaacaaaaaaCCTATGTATTTGTGGGGATTTGGTATATTATTAAGGTGGTATTTCGTTTCTGTGGGAAAAGGAAATTTCATTAACAGGCCAAATAGtctggagtcattctgttagtgttagaatactaattccaccagttaatatctgtatgagttggacaaaccatataaccatctgttgccttccttgtttcctctttaaagtgtttaatccgcaaaacaaacctgataaagtgagattaaattgaatagtacctggcccaagtaagtgttcttcagtaaatgttagtgattattACACAATGGCAAGGTGGCTATCCATTTGAAAAAAAATTAggccgggcgtggtggctcacacctgtaatcccaacactttgggaggccaaggtgggcggatcacctgaggtcaggagcccaagaccagcctgaccaacatggagaaaccccatctctactaaaaatacaaaaaaacaattaggcaggcatggtggcaaatgcctgtattcccagctactctggaggctgaggcaggagaacgcttgaacctgggagatggaggttgtgatgagccgagatcatgccattgcactcattccagcctgggcaacaagagtgaaactctgtctcaaaaaaaaaaaaaaaaaaaGAGAGAGAgaaaaaaattagtttcctacttcacatgattcataaaaatatttcaagtggatcaaagacctaaattttttttttttttgagacagtttctcactctgtcacccaggctgcagtgcgttggcacaatcatgactcactgcagccttgaccttcccaggccctgatgatccaccccagcctctcaagtagctgggatttttgtatttcttacagagatgggattttgccttattgcccaccttggccttctaaagtattgggattatgggcatgagccactgcacccACCCTAAACTTATTTCTAAGCTATGGAAGCATTAGGAAAATAAATGTAAAGAAAAACGTGTTTATCACCTTTGGATAGAATTCTTAAGCAGAATCTAAAAAGATTGAAGAGTTTGAATATATTAAAATTATAGATTTCTGTGCAAGACACTCCCCTCCCCTAAAAAACAAGTGACTGATGAGATTTTCCAATACATGTAACAAGGGTTTAGAGAAATGAGTACTGATGTCATGCTGACAGAAGTGCAAATATTTATGGCCATTTTTTACAGCTGTTGACAAGATCCACTAAAATAAAAATTGCAGATATCCTGTGA