Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name MRPL35
Plot displaying the genomic locations of a parental gene (in chr2) and its retrocopy(ies). Each line represents a retrocopy.
Specie Homo sapiens
Full Name mitochondrial ribosomal protein L35
Also known as L35mt|MRP-L35
Coordinate chr2:86199433-86213794
Strand +
Gene summary Mammalian mitochondrial ribosomal proteins are encoded by nuclear genes and help in protein synthesis within the mitochondrion. Mitochondrial ribosomes (mitoribosomes) consist of a small 28S subunit and a large 39S subunit. They have an estimated 75% protein to rRNA composition compared to prokaryotic ribosomes, where this ratio is reversed. Another difference between mammalian mitoribosomes and prokaryotic ribosomes is that the latter contain a 5S rRNA. Among different species, the proteins comprising the mitoribosome differ greatly in sequence, and sometimes in biochemical properties, which prevents easy recognition by sequence homology. This gene encodes a 39S subunit protein. Sequence analysis identified three transcript variants. Pseudogenes corresponding to this gene are found on chromosomes 6p, 10q, and Xp. [provided by RefSeq, Jul 2008]

Retrocopy(s) from MRPL35

Retroname Coord Strand Genomic Region ENSG
MRPL35P2 chr10:63634112-63634828 - Intergenic
ENSG00000232075 UCSC
MRPL35P3 chr10:74527581-74528301 + Intergenic
ENSG00000226253 UCSC
MRPL35P1 chr6:13949091-13949822 + Intragenic
ENSG00000220868 UCSC
MRPL35P4 chrX:12844707-12845433 - Intergenic
ENSG00000230691 UCSC

Expression

Transcript Sequences

>NM_016622.4
AAACCCAAAGCGGCCGCCGTAGGCGAAGGTGAAGATGGCTGCCTCTGCCTTTGCTGGTGCAGTGAGAGCAGCTTCAGGAATCCTACGGCCCCTGAATATTTTGGCATCTTCAACCTACCGCAACTGTGTCAAGAATGCCTCTCTTATTTCTGCATTGTCCACTGGACGTTTTAGTCATATTCAGACACCAGTTGTTTCCTCCACTCCCAGACTTACCACATCTGAGAGAAACCTGACATGTGGGCATACCTCAGTGATCCTTAATAGAATGGCCCCCGTGCTTCCAAGTGTCCTGAAGCTGCCAGTCAGATCTCTAACATACTTCAGTGCAAGAAAAGGCAAGAGAAAGACCGTGAAAGCTGTCATCGATAGGTTTCTTCGACTTCATTGTGGCCTTTGGGTGAGGAGAAAGGCTGGCTATAAGAAAAAATTATGGAAAAAGACACCTGCAAGGAAGAAGCGATTGAGGGAATTTGTATTCTGCAATAAAACCCAGAGTAAACTCTTAGATAAAATGACGACGTCCTTCTGGAAGAGGCGAAACTGGTACGTTGATGATCCTTATCAGAAGTATCATGATCGAACAAACCTGAAAGTATAGATCAGAAGTTTCACTTGTTTCTCAGTTATTGGATATGTATCTTTGTGTACATATCTTTGCAAAAATGGATAAGTACAAAACTTGATGTAAATTGTACCAATGAATACGTAAACATACAGTGACAACATTAAACTTAGAAAAGTTTTAAAACTTAATGGATCAGACTTTGCCAGATTTGGTTAGGGAAACAGAAATTTAGAATGGTGCATTATTTTTAACAAATGGTATTGGCTTAACTAGTtgtttcagttatgctcttttagttgcaaggaatctcaagtgggacaaacataaaaagactcaaaagctacaagttagctcaagcaatgtgacattatttcaaggatatgtgccagggaattcaggaaccaccTCACCAACCCCATCTCCCACTCAGAAATCACCTCCCAGCCTCAGGAAGAGTAGAAATTGGGTGGTGCTCCTCAGCAGGGGAAGGTGGATGTTTAGGCTTGGGctctgcatgcatgtgacttgcttctttttgcattgttaactccattctctctattcaccaacttctctacacagcttttgcatacttacagtttctgttcctttgtaataactttaacttgcacctttgaggttcttttctacatgatgaccttcagctcctgctgctagtctccaattgccaagggaatttaactgggccagactacctttttatactaggtctggttgggtcattgtctagagtagggattggctgtccttaagtcaggagcccgcTTTGTATTAGCAGGTTTGCATGCAGCAAAAAAACAGTTATGTGAGCAGTTTCACTTGGAGGTTCACATGGGGTGGCAGCACACTTAACATCTAACACACCAGGTTCATTGTGTTCATAACACTTGTCATTTACTGTAACAACATTTTTTCATAGGAGAGTAAATAGCCCTTCAGCATGCTCATTCATGAAACAGAAGAGGCTGTACAAGTGAAGACAAGGGCTTTTTATGCAAGTTTTGAAAGATAGGTAtttattttttctagagacaggagttttgctctgttgcccaggctggagtgcagtggtgcaatcatagctcattgaagcctcgcactcctgggctcaagtggtcctcctgcctcagcttactgagtaAGGATATGTATTTCTTAAAAGTTAGTTTATCCACTTCAGATTTCATGTTTTCATTTGTAAGGATAAACTTTTCCCACAAATTTTCAACAATCATTGTAGAAACTAAGGGGGAGAAAGTAATCTCAGTTGTTTTAGAAACGAAAAAGTTAAGCATTGTTTACTTGAAGTGGGCAGGGAAGCAGCACTGAGTAAAGTTCAATTGAGTGGTTACAGTCTAGGGcagtggttcccaactctccgatcagaatcatctgggaagcattttcaaaCAGCAAAGTACTTTGAAAACCATTATTAAATAGAATTATGCATGAATTACTGTTTCAGATCCTTTAATGTGGTAGTTGGTAATAATAAGATGAAATTCCTCTGTTGTTAGTAAAATTATGAAATTGAAGTTCTGCAGCATGTCAGGCCAGGATTATTAGGGAGATTCCTCGAAACTAGTGTGTGTTTATTAAAAGGAGAAAGGATAACAATAGAATGTTCTAAAACCAGAAGTCCAAGTGCGTGTCTACTTATGGGACCAATAAATAAAGAACAGACATTTGATTTGAGGTGAGGTAAAAGCCTGAAACATGGAATGGCATTCTGTTTTGATGGATTTTCATTTCTTCGCACTTCTGAGACGGCAAAGCCAACCACTTAGAAGCCTTCCACATCTTTGTCACCTGCCTGGCTCCTGCTCTCTGATGTACCTCTGGGTAGTGAGATGGAAATGGTGCCTGCAGAAGTTGGGGAGAAGGATACTTTTGCACAGCCTCCATGATGTCTTTATTGCAAATATGGATGACAAGGGTCTCTGTTACAGGGGCCTCAGAGCACCTTCGTTTCTCCTCTAGACCAGGGACAGGTGTAGAGATAAGGACTGGCAACCAGAGCCTCAGCATCCAAAGATGGACTGAAGTGGGATGGCTGACAGGCACATAACTTACGGGAAAGGGAATTTCATACATACGATTTTTGTTTTGTGGGTAGGAGGGCTTATCATCAACACTGATTTTATAATCTGACAATAAATGTCTTTCATTAAAGAGTTTACCTAAATGATGTTCGATTATATGTATAATTTATAAAATATTTATGTATAGTTTGTTTATTCAGGTATATGtataatttattgaacacctactatgtcccagcatatctacaaaactgggtacatacatactgtctaactgctaatccacatttccagtcttacaaaggacataatgattagttaagccctaatttagatttgaggaaactgaagctgagagagggttaagtaaattacccaaagtacagctaataagACCCAGAATCTCAGTCTCACTCCTTGGGATCCTGTGTATTTCCCTGAGTCTTCTAACATATGAAAATTCATATCTAAATCAACAAGTGACTGTAATCTGGTACTATAAATACTAAATAAACACTTCTTCATAACACTGTACCAATTCAGCTTTTAAATTTTATTACTTTGCTTTCCTGTCCTTTGCCAACTCTTAACCTAGTTAATCCTAGTTCTGTTGACATTGGACCAGGCTCAGTAAATAAACGAATGGATTTCCAGCCTTTTTTTCCCATCTGTTCCTGCTTTTAGTCCTCTGAATCTGCTTCTTTTCTTACTGCTGCTTTATTTTACAGTGATTTTGTCAAACATAGAATACAGGACTAAAAATGCAAAGAAATTGGGTCTGTGTTTAATTTTGATGTTTCAAATTTTGAGCTTCCAAGTCTTTGTGGCCACCCAATGAAGTTTGAGTCTGCCTGTTCAGATGTGAAAGGTAAGGGCTGCAGCAGGTTTAAGGGTGGCCCTTCACCACCCTGTTGTCACCTGCACAGGCACTCCCCCATTTGCAGATGAAGAAATGTTCAGAGAAGAAAAATGATGGACCAAACGTCTGTTTGCACAATTGAAACTCTACCAGTGGACTATTCTATTTTCACAGCTACCTAGTTTCTGCCGATGATTTTTTTAAATGTGAAATAAACAGTGATACTTTCA