Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name MRPL48
Plot displaying the genomic locations of a parental gene (in chr11) and its retrocopy(ies). Each line represents a retrocopy.
Specie Homo sapiens
Full Name mitochondrial ribosomal protein L48
Also known as CGI-118|HSPC290|L48MT|MRP-L48
Coordinate chr11:73787874-73865133
Strand +
Gene summary Mammalian mitochondrial ribosomal proteins are encoded by nuclear genes and help in protein synthesis within the mitochondrion. Mitochondrial ribosomes (mitoribosomes) consist of a small 28S subunit and a large 39S subunit. They have an estimated 75% protein to rRNA composition compared to prokaryotic ribosomes, where this ratio is reversed. Another difference between mammalian mitoribosomes and prokaryotic ribosomes is that the latter contain a 5S rRNA. Among different species, the proteins comprising the mitoribosome differ greatly in sequence, and sometimes in biochemical properties, which prevents easy recognition by sequence homology. This gene encodes a 39S subunit protein. A pseudogene corresponding to this gene is found on chromosome 6p. Several transcript variants, some protein-coding and some non-protein coding, have been found for this gene. [provided by RefSeq, Jan 2016]

Retrocopy(s) from MRPL48

Retroname Coord Strand Genomic Region ENSG
MRPL48P1 chr6:10459686-10460583 - Intergenic
ENSG00000238076 UCSC

Expression

Transcript Sequences

>XM_017017919.1
GCCCTGGGAACGCGGCTGCAGGGTCCGGTCTTCGGTTTGCACAGCTAGAGGCCGCGCAGCAGCAAAGGATGAGCGGAACCTTGGAAAAGGTGCTGTGCCTGAGGAACAATACCATTTTTAAGCAAGCCTTTTCTCTCTTAAGGTTTAGAACTTCAGGAGAGAAGCCCATCTATTCTGTAGagagagacggtcttgcttgtggcccaggcttgagtacagtggcatgatcatagctccctgcagcctcgaactcctgggttcaagcaatcctcctgcctcagcctctggagtagctgggattacagGTGGAATTCTACTAAGTATCAGTCGGCCCTACAAGACAAAGCCCACCCACGGCATTGGAAAGTACAAGCACTTAATTAAAGCAGAAGAGCCCAAGAAGAAGAAGGGAAAAGTGGAAGTGAGAGCCATTAATTTGGGGACAGATTATGAATATGGGGTTTTAAATATTCATCTGACTGCATATGATATGACCCTGGCAGAGAGTTATGCCCAGTATGTTCACAACCTCTGCAACTCTCTCTCCATTAAAGTCGAGGAAAGTTATGCAATGCCAACCAAAACCATAGAAGTGTTGCAGTTGCAGGACCAAGGCAGCAAAATGCTCCTGGACTCAGTGCTTACCACCCATGAGCGAGTGGTTCAGATCAGCGGTTTGAGTGCTACGTTTGCAGAAATTTTCTTGGAAATAATCCAAAGCAGTCTTCCTGAAGGAGTCAGACTGTCAGTGAAGGAGCACACTGAAGAAGACTTCAAGGGACGATTCAAAGCTCGACCAGAACTGGAAGAACTGTTGGCCAAGTTGAAGTAGCTACTGTAGACCCTTTCATGCCAGCAGTGGTCATATTGAGTGCCAAAGAGAAGAGCTTACTGGGTAGTTAGAGTTCATCAGGAGACCCAACCCTTAGATTTCATAAGTACCCATTCCCATAGCCAGTAATGTCCTCACTCCTCTGTGGCTTGGCTGTACTTGCCATTTCTTACCACTTACCTATGAGGTAATGCTTGTTATCTTCCATCTAATAAAAATCTGCTGCAGATGTGTA