Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

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Summary

Gene Name MRPS23
Plot displaying the genomic locations of a parental gene (in chr17) and its retrocopy(ies). Each line represents a retrocopy.
Specie Homo sapiens
Full Name mitochondrial ribosomal protein S23
Also known as CGI-138|COXPD46|HSPC329|MRP-S23
Coordinate chr17:57834781-57850044
Strand -
Gene summary Mammalian mitochondrial ribosomal proteins are encoded by nuclear genes and help in protein synthesis within the mitochondrion. Mitochondrial ribosomes (mitoribosomes) consist of a small 28S subunit and a large 39S subunit. They have an estimated 75% protein to rRNA composition compared to prokaryotic ribosomes, where this ratio is reversed. Another difference between mammalian mitoribosomes and prokaryotic ribosomes is that the latter contain a 5S rRNA. Among different species, the proteins comprising the mitoribosome differ greatly in sequence, and sometimes in biochemical properties, which prevents easy recognition by sequence homology. This gene encodes a 28S subunit protein. A pseudogene corresponding to this gene is found on chromosome 7p. [provided by RefSeq, Jul 2008]

Retrocopy(s) from MRPS23

Retroname Coord Strand Genomic Region ENSG
MRPS23P1 chr7:44920153-44920672 + Intergenic
 ENSG00000230160 UCSC

Expression

Transcript Sequences

>NM_016070.4
AGCAGCTAGTCACGCTCGGTACCAGGCGCAGATCATGGCAGGCAGCCGGCTGGAAACCGTAGGGAGCATCTTCTCTCGGACTCGGGACCTGGTTCGGGCCGGGGTGCTGAAGGAGAAGCCCCTGTGGTTTGACGTATATGACGCCTTTCCCCCGCTGAGGGAGCCCGTCTTCCAAAGGCCTCGAGTGCGATATGGCAAAGCCAAAGCTCCCATCCAAGACATCTGGTACCACGAGGATCGGATTAGAGCGAAGTTTTATTCAGTGTATGGGTCTGGTCAAAGAGCTTTTGATCTATTCAATCCAAACTTCAAGTCTACCTGTCAACGGTTTGTGGAGAAGTACACTGAGCTACAGAAACTTGGAGAAACAGATGAAGAGAAGTTATTTGTGGAAACAGGGAAGGCTTTATTGGCAGAAGGTGTCATTTTAAGACGAGTAGGCGAAGCAAGGACTCAACACGGAGGTAGTCACGTTTCCCGGAAATCCGAACACTTGAGTGTCAGACCACAGACTGCGTTGGAAGAAAACGAGACTCAGAAAGAAGTTCCACAGGACCAGCATTTGGAGGCACCTGCAGACCAGTCGAAAGGTCTCTTGCCTCCCTGAAGGACCTGTATACTGTGTATGCTGGCATTCACACTCTACTCACTGGCTGAATGTTGAGCTATTTTTAAACAGTTGAACTGTGTAAATGTTTCTTGATCTCTAAGGTATTATGTTTGCCTTCTCTTAGTTATTTCTGGGTTGTCACAAAGCTCAGTATCATGGTTTGACAGAAGCAGTTATGTGAACTTTTATGTTAGGACATTACTAAATAAAGAATTCCCTAGCTGCTTATAAAGTAAATTTACTTTGAATTGTAAATAACATGAAGAAACCTTTATAAAGATTGTTCAAATGGGACTCAATCTGACTAGGCTTGCTTTGATGTTTGTTAGTATGTGGGCTGGCTACATCTGATTCCCGGGTACATATTTCTTCTGATCCATCAGACTTATACGTGTACACATGTTGTGGAACCTTGGCTAGCTGGTTTTGTCTGCAGAGAATCTTTGTACTTCTTGCTATAGAACGATTATCTCTCCACTTGAGAGGCCAAGCTGACTTGCGCTTTGTGGTAAGAGTGAGGACCTGTCATTGCTGATACACAAAGACCAAAACTGTAACTTTAATGTCATGGATTGAGTGTGCTGGAGACAGTTaacataggcctgcacagactaggctgttcagtaaatacttgttgaatgaatgagtGAACGAATGGTTATATCCAGCTAAAGACTGGATTCATATGGTGTAGATAACAGGATTGCCAAGAAAGGAGGCAGCTAATTTAGGTGATGCTCTCCACCAGCATCCACCTGCCTCCCTGGGGCCAAAGTGTGCCTACAAGTCCTTATCAACTTCCCTGCCTTCCTCGTTTCCCCAGGTTTTACTAAATACATGAAATATCCCTCTGAGATTGCAGCCTTTGTATATGTGGTCAAGCCAGTGGTTTTTAGCTGTTAGTAGTAAGCTGCTTCAGAAATTCCCTATTTTAAAACTCATGTAGATTTTCTACCCAGTGATTCTTTGTGTATGCTCTCATCTCTCCTGGTACACTGTGAGGCAGGTCCACATCTCACAGTCTGTATATAGTACACATCCATGCACGTGGGTGCTTGGTTCATGCAGGTGAATGAATACATTAGGCAAAAGCAGCTCTCAGCCATGCTGCTTCCCCCTCGACCTTTATCACTGTTTCACAACTGCTTGCATTTGGAGAATGCTTTACTTTTCCGTAGGGAAGTAAATTTCATCCATTCAGAGACATTACACAACCATTGAGACCAAACATCGGGCCAGACCTTGGGAAGAGGACTTAAAAAGCAGGTGAAAGACACAGTCTATTCTCAGAGGAACAATTGAGGGGTCACTCATCTCTTTAAACCTTAGGTTTCTGGTTTTTTAAGGGCAGGTTTTTTTTGCCACAATGATGAATATTTAAAAAATGTTTTTTTCCTTCATGTCTGGATTGATGTCCCATTTTTGCTATTTTTGTTTGTTTTCCTCCTCTGTAGATTTTTAAttttttttttttttttttttttttttttgcgatggagtatcactttgtttcccaggctggagtacagtggagccatcttggcccactgcaacctccgcctcccaggttcaagcagttcttctgcctcagcctcccaagtagctgggattacaggtgtatgctatgacgcccggctaatttttgtatttttagtagaaacgggcttttaaccatgttgcccaggctgatctcaaactgctggcctcaagtgatccacccatctcaacctcccaaaatgctgggattacgggtgttagccaccatgcctggccTTAAttttttttttttttaattttgttttaggagatgggggtctcactgtgttacccaggctgggtgcagtggtgcataccctgccgcagtcttaactcctgggctgaagccatcctggctcacttcccgaatagctaggactataggcatgtgccaccacgcctggctctttaacattttttttgtttgtttttttttgtagagatggagtcttgctatgttgcccaggctggcctggtctcaaactcctggcctcaagcgatcctcctgcctcagccgcccaaagtgctgggattacaggcctgagcgaccgTACTGGGGCTGAAGACTTTTAAAGAAGTTATTTGTTGCATAattctttaaaaaaattatacatgcacatggttcaaaacttaacagtaaaaagctagtctcccacccctgttccccagccacccttttccccttccctgaggccatcactatcaccatttccttgtgcgctcttccagaaatattttgggcatggacaggacactatgcatactgttctgtaccttgcttttctagttactatgtctcagagatcCACTGTGATTTAATCAGTGCCCGATTGAAGAAAATGTTCTTTGTTTTACTGTGTTGCAAatgggctgctagagttatgggatgctggatcaaggagcagatcattttgagttttgatatcttcgtccatagaaattgtgcttaactatactctcatagcaatgtatgagaatgcgttcccctacacattctgatcttgttaaacCAGACTGGGACTCTGGACCAGAAGGGAAAGACCATCCCTGTATAGCAAATATCTGGATGGGGAGAAAGCTGCTGTCACTCATTGACTTCTTTAGGTTAAGTCTTAGTGATCAAAACATAGTGAAAGATATGAAGCTTACTTTGGAAACTCAGAACTATTTCCACAGTTTGGGCAAAAGCTGTCATCAGATCCCCATCACGTTTTGGAGAGAATGGAAGCATGACCGCATTCTTGGCTTTAAAGAGCTTAAAATCAggccgggctccatggctcacgcctgtaatcccagcactttgggaggccaaggtgggcggatcacctgaggtcaggagttcgagaccagcctggccaacatagtgaaaccccatctttactaaaaatacaaaaaaattagctgggcgtgcgggcgtgtgcctgtaataccagctacccgggaggctgaggcaggagaatcgctggaacccaggaggcagaggctgcagttgagccgagattgtgccactgcactccagcttgggcgacagagcaagaccctgtctcaaaaaaaaaaaaaaaaaaaTCTTAAAATCGAGTTGGGACTACAAGAGTGACTTGTGAAACAGCAAGATGAACAGGAATCCTTTTAAACTTTGATATAAAAGTACAGTAGAGGTTCAGGGGCAAGGAATCAGTTCTGGATTTGTCTAGGAATACTGCATGAGAGCCTGGAAAGGCAGTGGGATGGACATGTACATGCGGTTTCTTTGGGCAGGAACACCCTCCCTTCTACCATGGTCTGTAGGAATTGAACCTTCCGTGCCGTTTTCAAATGCTGTCTGTGCTCGGAAAATACATAATATCAAGTCCCTTACTGAACCCCCTACAGATTGTGTTCATAAGGTGCTTCACTGCTGTTGGTCTACCTGGCCTACTGTTTGTACTCCTGCCTCATTTACTGTGGCCTTCATTCAAGTAGTAATGATTATTTACCTATTAAGAGTATAGGGTgggcgtggtggctcatgtaatcccagcactttgggaagtcaagatgggtagatcacttgaagtcaggagtttgagaccagcctgggcaacatgatgaaaccccatctctactaaaaatacaaaagttagctggatgtggtggcagcctcctgtaatcccaactactcggcaggctgaggcaggagaatcgcttgaacccaggaggtggaggttacagtgagctgagatcatgctacagcaccccagcctgggcgacagaagagagacactgtctcaaaaaaaaaaaaaaaaaaaGTATAAAGGAGGGCAGAAATTCTTATTCTTTTAACCCATTGAAACATTAAACAGCCTTTCAGGAGCAGACCCTCCTACGGATTTGCTGAATCCAAGGCGAGGAAGGCATATATCCAGGTtacagtgaagtttgccccagacaagtaatgaagatttgggttctagatctggatactccaggcagtttttactatgtgaccctgtgcctgtcacagtatttcagcctgtaaaatatggacaatgtttgcctttttggcttccagttagctttgtgaggattaattgagatgagtgcaaagctcatttgtaatgtgtGGCTGGTGGTTTTATTACTATTTTGAGCAGTAGTGGAAAAGCCCATTTGAACTGGTAGGATGAGATAAGATCATGGTGGCCTTGACAACTACATGGAGGAGCCAGTTGGGTATGGGAAAGTTTGAGCAGGGAAAGAAAGAATGTAGTGAAAGCAGTGTCAGGTCAAAGAAAGGTTTGCCTAGGAGTGATGTAAAGAATGGGATGGAGGAGTGGGCAGGGAAGGAGGAAAGAGGAGACATGTCAGAGGGACCAAAAAGGAGGCAGCAAGTCCAAGGTCACAAACCTGAGTGACTAGAAAACTTAGCAGCATCACTAACACCCAGTTGGTGACGTGGAACTGGTGCTCTCCTGGGAGAGAGCTTCAATTCTCAACCTACTAAGTTGAAGGTGATGGTGCTATATCTAAGTGGCAGACAGAGATAAGGGATAGGTGTCTACAGGGGCAAGATTTGGAGCCAGGAGAAGAAATGAGCTCTCCAAGGGTAGTGGGGAGAGATCTGGGATGTTGGGGGCTGGCAGGTAAATGCTTTAAGTGATAGAATAGGAGGAATGAGAAAGCCAGCAAAAGAAATTCACGTCCCATGTCTTCCATCATCTATATGTCTGACTTGTTTAAGTGGTCCTGGATTCACCAAATTTTATAGAGCTCTGCCTCTGCCTTTATTGGGTAGGCCTGATTTTTGATGATGTCCTTAAAAGGCTAGCCTGATTCTTCTTGTAGTTTTGTAGAACACTTTGTATCGAGAGTTCTCTGATAATGAAAGTGGTATTACAGAATAATCTGCCCCCGAAGGACTCCTGATTTTGTTAAAGTGATACCTTTCTCTGTAAATAAATGATGGCGTGCCACTTAAAAA